Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013162
CDS Infomation

pacid=37475969 polypeptide=PGSC0003DMP400009126 locus=PGSC0003DMG400005140 ID=PGSC0003DMT400013162.v4.03 annot-version=v4.03
Sequence

ATGGGTGACAAAACTCAATTTGATTCTCGCCTTAATCAGATCTCCAAAGATGTGCAAGGA
CCCAACGATTCCATTCCGCTTTCACCGCAGTGGCTCCTGCCAAAACCAGGGGAAAGTAAG
GCTGGGATAGTTACCGGGGACAACCATCTCAACATACATCCGGGGTATGGTATTCGTTCA
GAGTTAGCGAAATTCCCTGGGATGGGTGATGATATGCATGATAATCAAAAGAAGAAAGAT
GTTTTTAGGCCATCTGTGCTCGATATGGAATCAGGTCGACGGGATCGCTGGCGTGATGAA
GAAAGGGACACCAATTCTGCTGTTCGAAGGGACCGCTGGAGGGAGGGAGATAAGGAGATT
GGTGATGGCCGCAAGGTGGAGCGCTGGTCGGACTCCTCTGGCAGACATCATGGAGAAGCA
CGACGTGTTCCAGGTGAAAGATGGACTGATTCTGGAAATAGGGAAAACAATCACGATCAG
CGTCGAGAGAGCAAATGGAACACGCGCTGGGGACCTGATGAGAAGGAAGCAGATGCTGTA
CGTGAGAAATGGAGCAACTCTAGCAAAGATGCTGAAATGCATCTTGAGAAGGGGTCTCCA
GGTCTTGCTTATCATGGAAAGGATGAGAGAGAGGGTGACCACTATCGGCCATGGAGATCT
ACGTCTCACGGCAGGGGAAGGTCAGAACCTACTCATCAGGCTTTTACACCAAACAAACAG
GTTCCTACATTTTCTCATGGCCGGGGACGTGAAGATGGTGCTACCGCTACTTTTTCTCTA
GGTAGGGGTCGTGCTCTCTCTGGAGGGAGCCCCATGATAAAGGGCTCTCCTCATGTGCAG
TCATTCGGGGCATTCTCGGAGAAAGCTGAAAATGTTTCCTCTCCTATACAATACAGTCGG
ATAAAAATGCTTGATGTGTATAGAGTTACAGACATGCAGTCCTGTAGTAACTTTTCGGAT
GTGATTGTGCAATTTCCTTCACTTACACAAGATGAACCTCTGGAACCTCTTGCATTATGT
GCACCCAGTCCGGAGGAATTGGCTATCTTGAAGGGAATTGATAAGGGGGATGTTCTGAGT
AGTGGAGCTCCGCAGATTACTAAAGATGGAGCGTTAGGTCGAAACTCAACTGAACATACT
CAGCCAAGGCGCGGCAAACTAGGTAGCAGAGAAGATTTATCATTTGATGATTCAAGAGAT
GAAAGTATTGACAATGCAAAAGTTTCAGTAGAAGACAGTATTCCTCATAGAGAACGGGAG
TCTGTCAATAGAGATCCAAGCACACCAGGACACTCACCTGTTCCCCATGGTGGCGGCTTA
TGGCGATCATCTTCAATTGGTGCACGTTCACATCTGGTGGCTAATGATGCTAGAGAAATG
CCAACTGATATCAGGTCAAGAACATCTGACATTGGATGGCTCCAGAACCAGAAGGATAAG
AATATAGAGCGGGAAAGAGATCTTGCAGATCCTTCTTACCCCAAAAACGAAGGATCTAAA
TGGCAGTTTGGAGATGATCCTATTCTCAAAAGGCAATTATCTGCTGCCATGGACAAAGAG
TTGGAGATGAGGAAAATTTCACAATCTTCTCCGGAGGACCTGGTTCTATATTACAAAGAT
CCACAAGGCTCAATTCAAGGTCCTTTCTCAGGTAGTGATATTATTGGATGGTTTGAGGCT
GGATATTTTGGCATAGATTTGCTAGTTCGATTAGCTACTGCACCACATGATTCACCATTT
TATCTGCTGGGGGATGTTATGCCCCACTTGCGTGCTAAGGCTCGGCCACCTCCTGGATTT
GGAGCACCAAAGCCCAATGCAGATGCTCCAGGGGGGTTGAACGTGAGCAGCTTCACAAAA
CTTCATGCAGGTTCAAGTGAGATTGATATGGTAAAGAGTGACATGAATTACAAGCATGGC
TCAACAACAGAGGCTGAAAATAGATTCTTGGAGTCACTGATGGCTGGCAAAGTAGGCCAT
GCACCGCTTGACAAGTTTGCTCAGTCTGAAGCAGGCATGCCGGCTTATGGTGCAAATAAT
ATTGGTGCTGTTCCTCCTATGGTAGCTGAAAGTGGAGATAATCTGTATCTCTTGGCTAAA
AAGATTGCTCTTGAGAGACAGAAATCTCTACCAAAGCCCTATCCTCTTTGGCCCGGGAGA
GATGCACCATCTGTTGTTCCAAATGCGGATATTGTTCAAGATCCTTTGCCTCATTCTCAA
CGGCCTTCAATGGCTGAAAATATTCGCCAGCAGCCCCATAATCAGAATGTTGATTTGATG
TCTCTACTTCAGGGCATACCAGACAGATCAGCTGGTATTAGTAGCGGTCTTAGTGGTTGG
TCTAATTTCTCCGTCCAAGGGGGATTAGAACCGCTTCAGGAAAGGATGGAGATGCATCAA
GGTCAGAGTATGCCCCCTCAATCTGCCTTTGGAATGCAACAACAGAGGCTACACCCACAG
AATCCACCTATGACCAACTTATTGGGTGCCGTGGATAATACATCCAGCATTTTGGCTACT
GAAAAGCTACTTTCATCTGGAGTTCAAGATCCACAGCTGTTAAATCTATTGCAGCAACAG
TACTTGCTGCAGCTACAGTCTCAGGCAGCACAAGGACCACAACAATTGTCAGTGTTAGAC
AAGTTGTTGATGCTCAAGCAGCAGCAGCAGAAACAGGAGGAACAGCAACTAATATTGCGC
CAGCAGCAGCAGTTGCTCTCTCAAGTTCTGTCTGATCAGCATCCTCATCAGCGATTTGGT
GAACAACCTACCCTTTTCCCGCCTTCACATAATTTGTTTTCAATGAATACACAAATACAA
CTTCCAGTTATGGAAGAAGCTCGTGCTTCAAATTTCGTCTTGCCCTCGAGCATTTCTCAG
GATGTCAGCCAAATAGGTAGCTCTGAAACCTCATCTGTGCACTTGCCACATCAAATGTTT
GGAGACTTTTCCAGTCAGAGGAGTTGGGGTTTAGTGGAACAAATTGATGATGTTCAACCG
AAGGTCCCAAGGATGGCAACAGCCATGATTGATCCATCATCACATACAGAATTTACCAGC
AAACATCACCTAGAGAAGGGCTCAGAAAACAATGAACCTCCAGCCACTGCTGAAATTGCC
TCTCATTTTCCACATGTTGAACAATTAGAAAAGGCAGTTATACCACCACCACCAGCTGTT
GATAATGACTTGCATCAGAAAAACAGAGTTGAATCACCACCAGCTGCAGCTCCCTCAGAA
CCACAGATTGAAGGAGATGATCTACGTGATGGACTTTCTGTCACCAAGGAACTGAAAAGT
GTTGAAACCCGGGAAGTTAAAAAATCATCTGAAAAGAAGTCCAGGAAGCAGAAGTCTACT
AAGGGACAAACTTCGGACTTGGTGAAGGGAGCTTCTAAGTCACAGCCATCAAAGCCCTTG
CAATCTGATACCCCCATTGCTTCTGATTCACAATCTGTTTTAGTTGACAAAGCTACAGCT
GTAGGTCCAGCAAGAAGAGAGAGCAAACCTGAAACAGCTATTGCTGATGTTGTGGATGAA
TATCCAGGGCAAAACCCACCAGTTTCACAGTTCAACTCCCAAGTACTGTCTGGACAGCGA
GCTTGGAAACCTGCTCCTGGTTTCAAGCCGAAGTCATTGTTGGAAATTCAAGAGGAAGAG
CAGATGAGAGCACAAGCAGAAATAGCTACTACAGAGGTCGCCACATCTCTGAGCTCCTTG
AGTGTGTCTACTCCATGGGCTGGGTTTGTTACTAATTCAGATCATAAATTAGTTAGAGAT
ACTCAGCAAGATGCTGCCAGCACTGATTTGAATATGAATAATTCAGATGTTTCTCTCAAC
CAGAAGAGTAAGAAAAGTCAATTGCATGATGTACTGGCTGAGAACACTTTGGCCAAGTCA
AGCGACAGAGAGAGAGATTTTCCTGATATTACATCTATTCAACCTTCTGTATCTGTCAAC
GATGATGATAACTTTATTGAAGCTAAAGAAACTAAAAAGAGCCGCAAAAGATCTGCAAAA
TCTAAGGGTGCAGGAGCGAAGGTCTCAGTGCCCACTGCTGCTTCTGAGGTGTCTATTGCA
TCAAGTCCTATTGACAAAGTCAAAAGCTCGCGTCAGGTACAACCTGACCAGGAAGTATTA
CCTGCTATACCATCTGGTCCTTCGCTAGGAGATTTTGTTGTTTGGAAGGGCGAGTCTGCA
AGTTCTTCTCCTATTCCTGTTCCAGCATGGTCCACTGATGCTGGGAAACCCTCAAAACCC
ACATCCTTACGGGACATCCTAAAGGAACAAGAAAAGAAGGTTTCTTCTGGACAGCAGCAT
ATACCAGTGCCAACACAGAAATCTGTGCCAAATCCACCTGCCAGAGTAGGTGGTCCATCA
TGGTCTGCCACTGGTTCATCGCCCGCCAAGGCATCTCCTATTCAGATCAACTCACAAGCT
GGCACTAATTCAAAAAATAAAGTGGAGGATGATTTGTTTTGGGGCCCAATAGATCATCCC
AAGCAAGAGGCAAAGCAGTACGACCATTTCCTTCCTCTCTATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400009126
PEP Infomation

pacid=37475969 transcript=PGSC0003DMT400013162 locus=PGSC0003DMG400005140 ID=PGSC0003DMT400013162.v4.03 annot-version=v4.03
Sequence

MGDKTQFDSRLNQISKDVQGPNDSIPLSPQWLLPKPGESKAGIVTGDNHLNIHPGYGIRS
ELAKFPGMGDDMHDNQKKKDVFRPSVLDMESGRRDRWRDEERDTNSAVRRDRWREGDKEI
GDGRKVERWSDSSGRHHGEARRVPGERWTDSGNRENNHDQRRESKWNTRWGPDEKEADAV
REKWSNSSKDAEMHLEKGSPGLAYHGKDEREGDHYRPWRSTSHGRGRSEPTHQAFTPNKQ
VPTFSHGRGREDGATATFSLGRGRALSGGSPMIKGSPHVQSFGAFSEKAENVSSPIQYSR
IKMLDVYRVTDMQSCSNFSDVIVQFPSLTQDEPLEPLALCAPSPEELAILKGIDKGDVLS
SGAPQITKDGALGRNSTEHTQPRRGKLGSREDLSFDDSRDESIDNAKVSVEDSIPHRERE
SVNRDPSTPGHSPVPHGGGLWRSSSIGARSHLVANDAREMPTDIRSRTSDIGWLQNQKDK
NIERERDLADPSYPKNEGSKWQFGDDPILKRQLSAAMDKELEMRKISQSSPEDLVLYYKD
PQGSIQGPFSGSDIIGWFEAGYFGIDLLVRLATAPHDSPFYLLGDVMPHLRAKARPPPGF
GAPKPNADAPGGLNVSSFTKLHAGSSEIDMVKSDMNYKHGSTTEAENRFLESLMAGKVGH
APLDKFAQSEAGMPAYGANNIGAVPPMVAESGDNLYLLAKKIALERQKSLPKPYPLWPGR
DAPSVVPNADIVQDPLPHSQRPSMAENIRQQPHNQNVDLMSLLQGIPDRSAGISSGLSGW
SNFSVQGGLEPLQERMEMHQGQSMPPQSAFGMQQQRLHPQNPPMTNLLGAVDNTSSILAT
EKLLSSGVQDPQLLNLLQQQYLLQLQSQAAQGPQQLSVLDKLLMLKQQQQKQEEQQLILR
QQQQLLSQVLSDQHPHQRFGEQPTLFPPSHNLFSMNTQIQLPVMEEARASNFVLPSSISQ
DVSQIGSSETSSVHLPHQMFGDFSSQRSWGLVEQIDDVQPKVPRMATAMIDPSSHTEFTS
KHHLEKGSENNEPPATAEIASHFPHVEQLEKAVIPPPPAVDNDLHQKNRVESPPAAAPSE
PQIEGDDLRDGLSVTKELKSVETREVKKSSEKKSRKQKSTKGQTSDLVKGASKSQPSKPL
QSDTPIASDSQSVLVDKATAVGPARRESKPETAIADVVDEYPGQNPPVSQFNSQVLSGQR
AWKPAPGFKPKSLLEIQEEEQMRAQAEIATTEVATSLSSLSVSTPWAGFVTNSDHKLVRD
TQQDAASTDLNMNNSDVSLNQKSKKSQLHDVLAENTLAKSSDRERDFPDITSIQPSVSVN
DDDNFIEAKETKKSRKRSAKSKGAGAKVSVPTAASEVSIASSPIDKVKSSRQVQPDQEVL
PAIPSGPSLGDFVVWKGESASSSPIPVPAWSTDAGKPSKPTSLRDILKEQEKKVSSGQQH
IPVPTQKSVPNPPARVGGPSWSATGSSPAKASPIQINSQAGTNSKNKVEDDLFWGPIDHP
KQEAKQYDHFLPLY*

Transcript Sequence

Transcript ID

PGSC0003DMT400013162
Transcript Infomation

pacid=37475969 locus=PGSC0003DMG400005140 ID=PGSC0003DMT400013162.v4.03 annot-version=v4.03
Sequence

ATGGGTGACAAAACTCAATTTGATTCTCGCCTTAATCAGATCTCCAAAGATGTGCAAGGA
CCCAACGATTCCATTCCGCTTTCACCGCAGTGGCTCCTGCCAAAACCAGGGGAAAGTAAG
GCTGGGATAGTTACCGGGGACAACCATCTCAACATACATCCGGGGTATGGTATTCGTTCA
GAGTTAGCGAAATTCCCTGGGATGGGTGATGATATGCATGATAATCAAAAGAAGAAAGAT
GTTTTTAGGCCATCTGTGCTCGATATGGAATCAGGTCGACGGGATCGCTGGCGTGATGAA
GAAAGGGACACCAATTCTGCTGTTCGAAGGGACCGCTGGAGGGAGGGAGATAAGGAGATT
GGTGATGGCCGCAAGGTGGAGCGCTGGTCGGACTCCTCTGGCAGACATCATGGAGAAGCA
CGACGTGTTCCAGGTGAAAGATGGACTGATTCTGGAAATAGGGAAAACAATCACGATCAG
CGTCGAGAGAGCAAATGGAACACGCGCTGGGGACCTGATGAGAAGGAAGCAGATGCTGTA
CGTGAGAAATGGAGCAACTCTAGCAAAGATGCTGAAATGCATCTTGAGAAGGGGTCTCCA
GGTCTTGCTTATCATGGAAAGGATGAGAGAGAGGGTGACCACTATCGGCCATGGAGATCT
ACGTCTCACGGCAGGGGAAGGTCAGAACCTACTCATCAGGCTTTTACACCAAACAAACAG
GTTCCTACATTTTCTCATGGCCGGGGACGTGAAGATGGTGCTACCGCTACTTTTTCTCTA
GGTAGGGGTCGTGCTCTCTCTGGAGGGAGCCCCATGATAAAGGGCTCTCCTCATGTGCAG
TCATTCGGGGCATTCTCGGAGAAAGCTGAAAATGTTTCCTCTCCTATACAATACAGTCGG
ATAAAAATGCTTGATGTGTATAGAGTTACAGACATGCAGTCCTGTAGTAACTTTTCGGAT
GTGATTGTGCAATTTCCTTCACTTACACAAGATGAACCTCTGGAACCTCTTGCATTATGT
GCACCCAGTCCGGAGGAATTGGCTATCTTGAAGGGAATTGATAAGGGGGATGTTCTGAGT
AGTGGAGCTCCGCAGATTACTAAAGATGGAGCGTTAGGTCGAAACTCAACTGAACATACT
CAGCCAAGGCGCGGCAAACTAGGTAGCAGAGAAGATTTATCATTTGATGATTCAAGAGAT
GAAAGTATTGACAATGCAAAAGTTTCAGTAGAAGACAGTATTCCTCATAGAGAACGGGAG
TCTGTCAATAGAGATCCAAGCACACCAGGACACTCACCTGTTCCCCATGGTGGCGGCTTA
TGGCGATCATCTTCAATTGGTGCACGTTCACATCTGGTGGCTAATGATGCTAGAGAAATG
CCAACTGATATCAGGTCAAGAACATCTGACATTGGATGGCTCCAGAACCAGAAGGATAAG
AATATAGAGCGGGAAAGAGATCTTGCAGATCCTTCTTACCCCAAAAACGAAGGATCTAAA
TGGCAGTTTGGAGATGATCCTATTCTCAAAAGGCAATTATCTGCTGCCATGGACAAAGAG
TTGGAGATGAGGAAAATTTCACAATCTTCTCCGGAGGACCTGGTTCTATATTACAAAGAT
CCACAAGGCTCAATTCAAGGTCCTTTCTCAGGTAGTGATATTATTGGATGGTTTGAGGCT
GGATATTTTGGCATAGATTTGCTAGTTCGATTAGCTACTGCACCACATGATTCACCATTT
TATCTGCTGGGGGATGTTATGCCCCACTTGCGTGCTAAGGCTCGGCCACCTCCTGGATTT
GGAGCACCAAAGCCCAATGCAGATGCTCCAGGGGGGTTGAACGTGAGCAGCTTCACAAAA
CTTCATGCAGGTTCAAGTGAGATTGATATGGTAAAGAGTGACATGAATTACAAGCATGGC
TCAACAACAGAGGCTGAAAATAGATTCTTGGAGTCACTGATGGCTGGCAAAGTAGGCCAT
GCACCGCTTGACAAGTTTGCTCAGTCTGAAGCAGGCATGCCGGCTTATGGTGCAAATAAT
ATTGGTGCTGTTCCTCCTATGGTAGCTGAAAGTGGAGATAATCTGTATCTCTTGGCTAAA
AAGATTGCTCTTGAGAGACAGAAATCTCTACCAAAGCCCTATCCTCTTTGGCCCGGGAGA
GATGCACCATCTGTTGTTCCAAATGCGGATATTGTTCAAGATCCTTTGCCTCATTCTCAA
CGGCCTTCAATGGCTGAAAATATTCGCCAGCAGCCCCATAATCAGAATGTTGATTTGATG
TCTCTACTTCAGGGCATACCAGACAGATCAGCTGGTATTAGTAGCGGTCTTAGTGGTTGG
TCTAATTTCTCCGTCCAAGGGGGATTAGAACCGCTTCAGGAAAGGATGGAGATGCATCAA
GGTCAGAGTATGCCCCCTCAATCTGCCTTTGGAATGCAACAACAGAGGCTACACCCACAG
AATCCACCTATGACCAACTTATTGGGTGCCGTGGATAATACATCCAGCATTTTGGCTACT
GAAAAGCTACTTTCATCTGGAGTTCAAGATCCACAGCTGTTAAATCTATTGCAGCAACAG
TACTTGCTGCAGCTACAGTCTCAGGCAGCACAAGGACCACAACAATTGTCAGTGTTAGAC
AAGTTGTTGATGCTCAAGCAGCAGCAGCAGAAACAGGAGGAACAGCAACTAATATTGCGC
CAGCAGCAGCAGTTGCTCTCTCAAGTTCTGTCTGATCAGCATCCTCATCAGCGATTTGGT
GAACAACCTACCCTTTTCCCGCCTTCACATAATTTGTTTTCAATGAATACACAAATACAA
CTTCCAGTTATGGAAGAAGCTCGTGCTTCAAATTTCGTCTTGCCCTCGAGCATTTCTCAG
GATGTCAGCCAAATAGGTAGCTCTGAAACCTCATCTGTGCACTTGCCACATCAAATGTTT
GGAGACTTTTCCAGTCAGAGGAGTTGGGGTTTAGTGGAACAAATTGATGATGTTCAACCG
AAGGTCCCAAGGATGGCAACAGCCATGATTGATCCATCATCACATACAGAATTTACCAGC
AAACATCACCTAGAGAAGGGCTCAGAAAACAATGAACCTCCAGCCACTGCTGAAATTGCC
TCTCATTTTCCACATGTTGAACAATTAGAAAAGGCAGTTATACCACCACCACCAGCTGTT
GATAATGACTTGCATCAGAAAAACAGAGTTGAATCACCACCAGCTGCAGCTCCCTCAGAA
CCACAGATTGAAGGAGATGATCTACGTGATGGACTTTCTGTCACCAAGGAACTGAAAAGT
GTTGAAACCCGGGAAGTTAAAAAATCATCTGAAAAGAAGTCCAGGAAGCAGAAGTCTACT
AAGGGACAAACTTCGGACTTGGTGAAGGGAGCTTCTAAGTCACAGCCATCAAAGCCCTTG
CAATCTGATACCCCCATTGCTTCTGATTCACAATCTGTTTTAGTTGACAAAGCTACAGCT
GTAGGTCCAGCAAGAAGAGAGAGCAAACCTGAAACAGCTATTGCTGATGTTGTGGATGAA
TATCCAGGGCAAAACCCACCAGTTTCACAGTTCAACTCCCAAGTACTGTCTGGACAGCGA
GCTTGGAAACCTGCTCCTGGTTTCAAGCCGAAGTCATTGTTGGAAATTCAAGAGGAAGAG
CAGATGAGAGCACAAGCAGAAATAGCTACTACAGAGGTCGCCACATCTCTGAGCTCCTTG
AGTGTGTCTACTCCATGGGCTGGGTTTGTTACTAATTCAGATCATAAATTAGTTAGAGAT
ACTCAGCAAGATGCTGCCAGCACTGATTTGAATATGAATAATTCAGATGTTTCTCTCAAC
CAGAAGAGTAAGAAAAGTCAATTGCATGATGTACTGGCTGAGAACACTTTGGCCAAGTCA
AGCGACAGAGAGAGAGATTTTCCTGATATTACATCTATTCAACCTTCTGTATCTGTCAAC
GATGATGATAACTTTATTGAAGCTAAAGAAACTAAAAAGAGCCGCAAAAGATCTGCAAAA
TCTAAGGGTGCAGGAGCGAAGGTCTCAGTGCCCACTGCTGCTTCTGAGGTGTCTATTGCA
TCAAGTCCTATTGACAAAGTCAAAAGCTCGCGTCAGGTACAACCTGACCAGGAAGTATTA
CCTGCTATACCATCTGGTCCTTCGCTAGGAGATTTTGTTGTTTGGAAGGGCGAGTCTGCA
AGTTCTTCTCCTATTCCTGTTCCAGCATGGTCCACTGATGCTGGGAAACCCTCAAAACCC
ACATCCTTACGGGACATCCTAAAGGAACAAGAAAAGAAGGTTTCTTCTGGACAGCAGCAT
ATACCAGTGCCAACACAGAAATCTGTGCCAAATCCACCTGCCAGAGTAGGTGGTCCATCA
TGGTCTGCCACTGGTTCATCGCCCGCCAAGGCATCTCCTATTCAGATCAACTCACAAGCT
GGCACTAATTCAAAAAATAAAGTGGAGGATGATTTGTTTTGGGGCCCAATAGATCATCCC
AAGCAAGAGGCAAAGCAGTACGACCATTTCCTTCCTCTCTATTAG