Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013115
CDS Infomation

pacid=37440280 polypeptide=PGSC0003DMP400009096 locus=PGSC0003DMG400005123 ID=PGSC0003DMT400013115.v4.03 annot-version=v4.03
Sequence

ATGGCAGAAGATAAGCATCAGCCTGAAATCGAGCCCGAGATGGACGTAGATGAAGGAGGA
GAAGACGAAGACGCAGATGATGAAGTTTTTTACGAGAGAATTGAAGCCCCAAAGTTCGTA
GATTTCTCAACTCCCGACCACTACCGCCCTGATGATCGTTACTGGTTCTGTCTCCGTGTT
GGCTGCGACCAGAAACATGAAGAAGAAATGGACTCAGAGAAAATCTACAAGGATTTCATC
CTCCGAGTAATGGCTGCTAGAAGCCCCAATGTTAGACTTCAGAAAGCACTAAGCAGACAT
GCTGCAGGCAAGAACTTAAAGTGCCCACTTACAGTGCCAGCAAAATCTTCCAAGTCTAGA
CTGTCAAAGTTAGCTGCTGTTTCAACCATTTCTCGTAAATTGATTGAAGACAAAGAGAAG
ACCAGTTCTCATAAATTGATTGAAGATAAAGAGAAGGCTGGTCATCCATCAAAGTCAACT
GCCACTCCAAAAATAAGAGGAAGACAAGTTGCTGCCAAGTATCTAACAACCCCAAGGAAC
AAAAAATGCCTTCCAAACCCAAATTCCTTTCATAGTGTGCAAAATCCAAAGCCTGCCCTT
GATGTTCCAAAGAATAAGATCATAGCTAAGGCTTTGGTTTTCCACTCCCCGAAGAAAGCC
ATCAGTTTAAAGAAATCAGTGGAACTGCGAATTCCCTTAACCAAATTATGTCAAGGAATC
AAGAAGCTAGAGATAACAGATCAAAAGAAGCGCCTACTGAAGTACTCCGGGAAGTCAAAG
GATACAAAACCTAATTGCAGAGATGCTATGATGAACAGAAATCCTCAGAAGGACAAAAGC
AAGACCCCCAAGAATACCGGAAAGTCTCAAACTCGAGTACCAAGGGAATCCAGACCTTTA
CACTCAACTAACATTCAGAACCAAGCTAAATTGGGTAAGCAGTGCCACTCCAAAAACATG
GCAGAAAATGAATGCAGCAAGACAGAAGTTGATTTAGCGTTGAGAGACGGTAACCAAGAG
ATTGCTACTGCTTTAGACAACCATAAAAATTCTGCACAGCCAGAAGCTAATGTCTGCTCA
GCTTTACATTCTACCAAAAATATGGATTTGGCATCAGCAGATGCTGTGACGGAAGAATTG
AAAAGTGATGCTGATCAAAAAGATTTGGTGGGAAATGATCTCCCACAAAGTCAACTACCA
ACTGGAGAGGATCATAATGGTACCGAATTGAATACTATGGACCATTCCATTTGTTTCCAG
ACTTCAGAAGGGGAAGGACATCACCACAGTGAGGGCGTGGACAGTGATGACAAAGAGAAC
GTTTCCGTCCCCGATGAGAACAGAAGTCCCACCAACAATTTAAACCAGGCTGGACAAAAA
GTTCTTGGTGTGCAGAAGATACAAAAAATCGTCAAGAAGAATGCTCAACCAGCAGCCAAG
AATCTTAAGGAAAGTTTGCTTTCCACAAACGCTGGAGTTTCAGGGATGAAGCCCAAGAAG
CCAAAGCCTACAAATCCTAAACCTTTCAGGCTAAGAACTGATGAAAGGGGAATTCTTAGG
GAAGCTGACTTACAAAGGAAAAAACAGGGTAATGTAGAAGATCCTGACAACGAAAACAGA
TGCACCAAAGACAATCCTGAAGGCAATGAGAAAGATTCAAAGGGCTTGCAAAATGATTTA
TCCAATGAGAGTGGGATAAAAAGCAGTAAGACTTCAGACGGGAAAGTGAGATTGAGGAAA
TCCAGTATAACACCAGAGAGATCTAATGCTACACAATTAAAGACAGCCAATTTAAGAAAT
GCTAAATCTCCTATGGTATCATGTTTGAGACAAGGTCAGCAACTCACTGTAATACAAGAA
GCATCAGCTGACAAATCCAAAGCTAAGGCTTTGACGCCTTCCAGAATGTTATCTCATGGA
AGAAGGCCTCTGACAATTCCAAAGGAGCCACACTTCCACAGCACTCACCGGCCCAAAAGT
TGCACAAGAAACTTAGTGGAACAAGTGCCCATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400009096
PEP Infomation

pacid=37440280 transcript=PGSC0003DMT400013115 locus=PGSC0003DMG400005123 ID=PGSC0003DMT400013115.v4.03 annot-version=v4.03
Sequence

MAEDKHQPEIEPEMDVDEGGEDEDADDEVFYERIEAPKFVDFSTPDHYRPDDRYWFCLRV
GCDQKHEEEMDSEKIYKDFILRVMAARSPNVRLQKALSRHAAGKNLKCPLTVPAKSSKSR
LSKLAAVSTISRKLIEDKEKTSSHKLIEDKEKAGHPSKSTATPKIRGRQVAAKYLTTPRN
KKCLPNPNSFHSVQNPKPALDVPKNKIIAKALVFHSPKKAISLKKSVELRIPLTKLCQGI
KKLEITDQKKRLLKYSGKSKDTKPNCRDAMMNRNPQKDKSKTPKNTGKSQTRVPRESRPL
HSTNIQNQAKLGKQCHSKNMAENECSKTEVDLALRDGNQEIATALDNHKNSAQPEANVCS
ALHSTKNMDLASADAVTEELKSDADQKDLVGNDLPQSQLPTGEDHNGTELNTMDHSICFQ
TSEGEGHHHSEGVDSDDKENVSVPDENRSPTNNLNQAGQKVLGVQKIQKIVKKNAQPAAK
NLKESLLSTNAGVSGMKPKKPKPTNPKPFRLRTDERGILREADLQRKKQGNVEDPDNENR
CTKDNPEGNEKDSKGLQNDLSNESGIKSSKTSDGKVRLRKSSITPERSNATQLKTANLRN
AKSPMVSCLRQGQQLTVIQEASADKSKAKALTPSRMLSHGRRPLTIPKEPHFHSTHRPKS
CTRNLVEQVPM*

Transcript Sequence

Transcript ID

PGSC0003DMT400013115
Transcript Infomation

pacid=37440280 locus=PGSC0003DMG400005123 ID=PGSC0003DMT400013115.v4.03 annot-version=v4.03
Sequence

ATGGCAGAAGATAAGCATCAGCCTGAAATCGAGCCCGAGATGGACGTAGATGAAGGAGGA
GAAGACGAAGACGCAGATGATGAAGTTTTTTACGAGAGAATTGAAGCCCCAAAGTTCGTA
GATTTCTCAACTCCCGACCACTACCGCCCTGATGATCGTTACTGGTTCTGTCTCCGTGTT
GGCTGCGACCAGAAACATGAAGAAGAAATGGACTCAGAGAAAATCTACAAGGATTTCATC
CTCCGAGTAATGGCTGCTAGAAGCCCCAATGTTAGACTTCAGAAAGCACTAAGCAGACAT
GCTGCAGGCAAGAACTTAAAGTGCCCACTTACAGTGCCAGCAAAATCTTCCAAGTCTAGA
CTGTCAAAGTTAGCTGCTGTTTCAACCATTTCTCGTAAATTGATTGAAGACAAAGAGAAG
ACCAGTTCTCATAAATTGATTGAAGATAAAGAGAAGGCTGGTCATCCATCAAAGTCAACT
GCCACTCCAAAAATAAGAGGAAGACAAGTTGCTGCCAAGTATCTAACAACCCCAAGGAAC
AAAAAATGCCTTCCAAACCCAAATTCCTTTCATAGTGTGCAAAATCCAAAGCCTGCCCTT
GATGTTCCAAAGAATAAGATCATAGCTAAGGCTTTGGTTTTCCACTCCCCGAAGAAAGCC
ATCAGTTTAAAGAAATCAGTGGAACTGCGAATTCCCTTAACCAAATTATGTCAAGGAATC
AAGAAGCTAGAGATAACAGATCAAAAGAAGCGCCTACTGAAGTACTCCGGGAAGTCAAAG
GATACAAAACCTAATTGCAGAGATGCTATGATGAACAGAAATCCTCAGAAGGACAAAAGC
AAGACCCCCAAGAATACCGGAAAGTCTCAAACTCGAGTACCAAGGGAATCCAGACCTTTA
CACTCAACTAACATTCAGAACCAAGCTAAATTGGGTAAGCAGTGCCACTCCAAAAACATG
GCAGAAAATGAATGCAGCAAGACAGAAGTTGATTTAGCGTTGAGAGACGGTAACCAAGAG
ATTGCTACTGCTTTAGACAACCATAAAAATTCTGCACAGCCAGAAGCTAATGTCTGCTCA
GCTTTACATTCTACCAAAAATATGGATTTGGCATCAGCAGATGCTGTGACGGAAGAATTG
AAAAGTGATGCTGATCAAAAAGATTTGGTGGGAAATGATCTCCCACAAAGTCAACTACCA
ACTGGAGAGGATCATAATGGTACCGAATTGAATACTATGGACCATTCCATTTGTTTCCAG
ACTTCAGAAGGGGAAGGACATCACCACAGTGAGGGCGTGGACAGTGATGACAAAGAGAAC
GTTTCCGTCCCCGATGAGAACAGAAGTCCCACCAACAATTTAAACCAGGCTGGACAAAAA
GTTCTTGGTGTGCAGAAGATACAAAAAATCGTCAAGAAGAATGCTCAACCAGCAGCCAAG
AATCTTAAGGAAAGTTTGCTTTCCACAAACGCTGGAGTTTCAGGGATGAAGCCCAAGAAG
CCAAAGCCTACAAATCCTAAACCTTTCAGGCTAAGAACTGATGAAAGGGGAATTCTTAGG
GAAGCTGACTTACAAAGGAAAAAACAGGGTAATGTAGAAGATCCTGACAACGAAAACAGA
TGCACCAAAGACAATCCTGAAGGCAATGAGAAAGATTCAAAGGGCTTGCAAAATGATTTA
TCCAATGAGAGTGGGATAAAAAGCAGTAAGACTTCAGACGGGAAAGTGAGATTGAGGAAA
TCCAGTATAACACCAGAGAGATCTAATGCTACACAATTAAAGACAGCCAATTTAAGAAAT
GCTAAATCTCCTATGGTATCATGTTTGAGACAAGGTCAGCAACTCACTGTAATACAAGAA
GCATCAGCTGACAAATCCAAAGCTAAGGCTTTGACGCCTTCCAGAATGTTATCTCATGGA
AGAAGGCCTCTGACAATTCCAAAGGAGCCACACTTCCACAGCACTCACCGGCCCAAAAGT
TGCACAAGAAACTTAGTGGAACAAGTGCCCATGTAA