Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013088
CDS Infomation

pacid=37437542 polypeptide=PGSC0003DMP400009077 locus=PGSC0003DMG400005106 ID=PGSC0003DMT400013088.v4.03 annot-version=v4.03
Sequence

ATGTCAAGAAGGCCAGCTCGCCGTTTTGCAGATACTGGGAGCATTCCATTTGTGGGCTCC
TTTCACCCCAAATCACGTCCATCTCCTTTATTGTCCTTAGGACTTGTTGTGGGTGCATTG
CTGATCATTGGGTACGTATATCATAGTTCAGGTGGAAAAAGTGCAGCAGATGCTTTTAGT
AGACTTGAAGGTGGTACTTCATGCACAGCGGAGCTTCACAGAGCATTACCTGTACTGAAG
AAAGCATATGGGGATAACATGCGGAAAGTGTTGCACGTAGGCCCTGACACTTGTTCAGTG
GTCTCTAAGTTATTAAAAGAAGAGGATACTGAAGCTTGGGGAATTGAACCATATGATTTA
GATGAAACTGATAGCAACTGCAAGGCTCTTGTTCACAAAGGGATTGTTCGAGTAGCCGAT
ATTAAGTTTCCTCTCCCCTACCGTTCAAAGTCGTTCTCTCTAGTCATAGTATCTGATGCA
GTGGATTACTTGTCTCCAAGATACCTTAACAGAACTCTTCCAGAGTTGGCAAGGGTGGCT
GCTGATGGTTTAGTTATTTTATCTGGTTACCCTGGTCAGCAAAAGGTTAAAGGGGCGGAG
CTGTCAAAATTTGGCCGGCCAGCCAAATTGCGGAGCTCATCCTGGTGGATTAGATTTTTC
ATTCAAACCAGCTTAGAAGAGAATGAACCTGTAACTAAGAAATTTGAACAAGCAGCAGCC
AAGAGGTCTTACAAGCCAGCCTGCCAAGTTTTCCACCTCAAGCCACTTCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400009077
PEP Infomation

pacid=37437542 transcript=PGSC0003DMT400013088 locus=PGSC0003DMG400005106 ID=PGSC0003DMT400013088.v4.03 annot-version=v4.03
Sequence

MSRRPARRFADTGSIPFVGSFHPKSRPSPLLSLGLVVGALLIIGYVYHSSGGKSAADAFS
RLEGGTSCTAELHRALPVLKKAYGDNMRKVLHVGPDTCSVVSKLLKEEDTEAWGIEPYDL
DETDSNCKALVHKGIVRVADIKFPLPYRSKSFSLVIVSDAVDYLSPRYLNRTLPELARVA
ADGLVILSGYPGQQKVKGAELSKFGRPAKLRSSSWWIRFFIQTSLEENEPVTKKFEQAAA
KRSYKPACQVFHLKPLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400013088
Transcript Infomation

pacid=37437542 locus=PGSC0003DMG400005106 ID=PGSC0003DMT400013088.v4.03 annot-version=v4.03
Sequence

ATGTCAAGAAGGCCAGCTCGCCGTTTTGCAGATACTGGGAGCATTCCATTTGTGGGCTCC
TTTCACCCCAAATCACGTCCATCTCCTTTATTGTCCTTAGGACTTGTTGTGGGTGCATTG
CTGATCATTGGGTACGTATATCATAGTTCAGGTGGAAAAAGTGCAGCAGATGCTTTTAGT
AGACTTGAAGGTGGTACTTCATGCACAGCGGAGCTTCACAGAGCATTACCTGTACTGAAG
AAAGCATATGGGGATAACATGCGGAAAGTGTTGCACGTAGGCCCTGACACTTGTTCAGTG
GTCTCTAAGTTATTAAAAGAAGAGGATACTGAAGCTTGGGGAATTGAACCATATGATTTA
GATGAAACTGATAGCAACTGCAAGGCTCTTGTTCACAAAGGGATTGTTCGAGTAGCCGAT
ATTAAGTTTCCTCTCCCCTACCGTTCAAAGTCGTTCTCTCTAGTCATAGTATCTGATGCA
GTGGATTACTTGTCTCCAAGATACCTTAACAGAACTCTTCCAGAGTTGGCAAGGGTGGCT
GCTGATGGTTTAGTTATTTTATCTGGTTACCCTGGTCAGCAAAAGGTTAAAGGGGCGGAG
CTGTCAAAATTTGGCCGGCCAGCCAAATTGCGGAGCTCATCCTGGTGGATTAGATTTTTC
ATTCAAACCAGCTTAGAAGAGAATGAACCTGTAACTAAGAAATTTGAACAAGCAGCAGCC
AAGAGGTCTTACAAGCCAGCCTGCCAAGTTTTCCACCTCAAGCCACTTCTTTGA