Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400013035
CDS Infomation

pacid=37462463 polypeptide=PGSC0003DMP400009047 locus=PGSC0003DMG400005080 ID=PGSC0003DMT400013035.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTCTTCTTACCAATGGAATCTCATGTTTTTCTCCCCAACCCATCACTGAACAA
CCTAAATTACCAAAAGGGTCTCAATTTCTGCTAAAATTAGCTAACCCCAGAAACCCTAAT
TCAAGAATCTTGAAGGTCAAAGCTGCAGAATTGAGCTATGAGGCAACTATTGACACACCA
GGTAAAGAATCTTCTGTTTCAACCTCAAATGAAAATGACCCACTTCAGAAATTCTTGAAA
AGAGACTATAAATGGGGTTTTAATCAAGAAATTGATTCTTTTTCATTACCAAAAGGGCTT
TCTGCAGAAACTGTTAAGCTTATTTCTGGTAGAAAAAATGAACCTAGTTGGATGCTTGAG
TTTAGATTGAAGTCTTATGAGAAGTTTCTTAAAATGAAAGAGCCTAAATGGTCTGATAAT
AAATACCCAGAAATTAGTTTTCAAGATATTTGTTATTATTCTGAACCTAAAAAGAAACCA
ACTTTGAATAGTCTTGATGAGGCTGATCCTGAGCTTATTAAGTATTTTGAAAAATTGGGT
ATTCCGTTGAACGAAAGGAATCGTTTGGCTAATGTTGCGGTTGATGCTGTTCTTGATAGT
GTTTCTATTGCTACAACTCATAGGAAGACTTTAGAGAAATCTGGTGTGATATTTTGTTCA
ATATCTGAGGCAATTAGGGAGTATCCTGATTTAGTTAAGAAGTATTTAGGGAGAGTTGTG
CCCCCGGAAGACAACTTTTACGCGGCTTTAAACTCGGCTGTGTTTAGTGATGGATCATTT
GTGTATATACCTAAAAACACTAGGTGTCCGATGCAAATCTCGACTTATTTTCGGATAAAT
GCAATGGAAACTGGACAGTTCGAGAGGACTGTGATAATTGCAGAGGAAGGGAGTTTTGTG
GAGTATTTAGAAGGGTGTACTGCACCTTCGTATGATACTAATCAGTTACATGCTGCTGTG
GTGGAGTTGTATTGCCATGAAGGTGCGGAGATTAAGTATTCCACTGTGCAGAATTGGTAT
GCAGGAGATGAGGAAGGTGTAGGAGGGATTTATAATTTTGTTACAAAGAGGGGAATTTGT
GCTGGGGCTAGGTCGAAGATTTCGTGGACACAAGTGGAGACAGGATCAGCTATTACCTGG
AAGTATCCGAGTGTTGTGTTAGAGGGTGATGAATCAGTTGGTGAGTTCTATTCCGTGGCG
TTAACCAATAATTATCAGCAGGCAGATACAGGGACAAAGATGATACACAAAGGGAAGAAT
ACAAGGAGTAGGATAATTTCAAAGGGTATTTCAGCAGGACATTCTAGGAACTGTTATCGA
GGACTAGTTCAGGTGTTGTCCAGTGCAGACAATGCCAAGAACTCCTCTCAGTGTGATTCA
ATGCTAATTGGCGATACTGCTGCTGCCAACACTTACCCATACATTCAGAGCAAAAACCCA
ACTGCACGCATGGAACATGAAGCGACAACGTCAAAGATTGGTGAGGATCAGTTATTTTAT
TTCCAGCAGAGGGGAATTGACTACGAGAAAGCAATGGCTGCAATGATATCGGGTTTCTGC
AGGGACGTTTTCAATGAACTTCCTGATGAATTTGGTGCTGAAGTGAACCAGCTAATGAGT
TTGAAACTTGAAGGATCTGTTGGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400009047
PEP Infomation

pacid=37462463 transcript=PGSC0003DMT400013035 locus=PGSC0003DMG400005080 ID=PGSC0003DMT400013035.v4.03 annot-version=v4.03
Sequence

MASLLTNGISCFSPQPITEQPKLPKGSQFLLKLANPRNPNSRILKVKAAELSYEATIDTP
GKESSVSTSNENDPLQKFLKRDYKWGFNQEIDSFSLPKGLSAETVKLISGRKNEPSWMLE
FRLKSYEKFLKMKEPKWSDNKYPEISFQDICYYSEPKKKPTLNSLDEADPELIKYFEKLG
IPLNERNRLANVAVDAVLDSVSIATTHRKTLEKSGVIFCSISEAIREYPDLVKKYLGRVV
PPEDNFYAALNSAVFSDGSFVYIPKNTRCPMQISTYFRINAMETGQFERTVIIAEEGSFV
EYLEGCTAPSYDTNQLHAAVVELYCHEGAEIKYSTVQNWYAGDEEGVGGIYNFVTKRGIC
AGARSKISWTQVETGSAITWKYPSVVLEGDESVGEFYSVALTNNYQQADTGTKMIHKGKN
TRSRIISKGISAGHSRNCYRGLVQVLSSADNAKNSSQCDSMLIGDTAAANTYPYIQSKNP
TARMEHEATTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMS
LKLEGSVG*

Transcript Sequence

Transcript ID

PGSC0003DMT400013035
Transcript Infomation

pacid=37462463 locus=PGSC0003DMG400005080 ID=PGSC0003DMT400013035.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTCTTCTTACCAATGGAATCTCATGTTTTTCTCCCCAACCCATCACTGAACAA
CCTAAATTACCAAAAGGGTCTCAATTTCTGCTAAAATTAGCTAACCCCAGAAACCCTAAT
TCAAGAATCTTGAAGGTCAAAGCTGCAGAATTGAGCTATGAGGCAACTATTGACACACCA
GGTAAAGAATCTTCTGTTTCAACCTCAAATGAAAATGACCCACTTCAGAAATTCTTGAAA
AGAGACTATAAATGGGGTTTTAATCAAGAAATTGATTCTTTTTCATTACCAAAAGGGCTT
TCTGCAGAAACTGTTAAGCTTATTTCTGGTAGAAAAAATGAACCTAGTTGGATGCTTGAG
TTTAGATTGAAGTCTTATGAGAAGTTTCTTAAAATGAAAGAGCCTAAATGGTCTGATAAT
AAATACCCAGAAATTAGTTTTCAAGATATTTGTTATTATTCTGAACCTAAAAAGAAACCA
ACTTTGAATAGTCTTGATGAGGCTGATCCTGAGCTTATTAAGTATTTTGAAAAATTGGGT
ATTCCGTTGAACGAAAGGAATCGTTTGGCTAATGTTGCGGTTGATGCTGTTCTTGATAGT
GTTTCTATTGCTACAACTCATAGGAAGACTTTAGAGAAATCTGGTGTGATATTTTGTTCA
ATATCTGAGGCAATTAGGGAGTATCCTGATTTAGTTAAGAAGTATTTAGGGAGAGTTGTG
CCCCCGGAAGACAACTTTTACGCGGCTTTAAACTCGGCTGTGTTTAGTGATGGATCATTT
GTGTATATACCTAAAAACACTAGGTGTCCGATGCAAATCTCGACTTATTTTCGGATAAAT
GCAATGGAAACTGGACAGTTCGAGAGGACTGTGATAATTGCAGAGGAAGGGAGTTTTGTG
GAGTATTTAGAAGGGTGTACTGCACCTTCGTATGATACTAATCAGTTACATGCTGCTGTG
GTGGAGTTGTATTGCCATGAAGGTGCGGAGATTAAGTATTCCACTGTGCAGAATTGGTAT
GCAGGAGATGAGGAAGGTGTAGGAGGGATTTATAATTTTGTTACAAAGAGGGGAATTTGT
GCTGGGGCTAGGTCGAAGATTTCGTGGACACAAGTGGAGACAGGATCAGCTATTACCTGG
AAGTATCCGAGTGTTGTGTTAGAGGGTGATGAATCAGTTGGTGAGTTCTATTCCGTGGCG
TTAACCAATAATTATCAGCAGGCAGATACAGGGACAAAGATGATACACAAAGGGAAGAAT
ACAAGGAGTAGGATAATTTCAAAGGGTATTTCAGCAGGACATTCTAGGAACTGTTATCGA
GGACTAGTTCAGGTGTTGTCCAGTGCAGACAATGCCAAGAACTCCTCTCAGTGTGATTCA
ATGCTAATTGGCGATACTGCTGCTGCCAACACTTACCCATACATTCAGAGCAAAAACCCA
ACTGCACGCATGGAACATGAAGCGACAACGTCAAAGATTGGTGAGGATCAGTTATTTTAT
TTCCAGCAGAGGGGAATTGACTACGAGAAAGCAATGGCTGCAATGATATCGGGTTTCTGC
AGGGACGTTTTCAATGAACTTCCTGATGAATTTGGTGCTGAAGTGAACCAGCTAATGAGT
TTGAAACTTGAAGGATCTGTTGGTTAA