Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012963
CDS Infomation

pacid=37463037 polypeptide=PGSC0003DMP400009000 locus=PGSC0003DMG400005052 ID=PGSC0003DMT400012963.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAGCTTTCGTTGAAGTTTTGTTACAAAACCTTAGCTCTTTTATTCAAAAGGAA
CTTGGATTGTTTTATGGCGTCGATGAAGAATTAAGAAAACTTTCAAGCTTGCTATCGACA
ATCAAGGCTGTCCTTCAGGATGCAGACCAGGAACAACTGAAAGAAAAGGCAATAAGAAAT
TGGTTGCAGAAGCTAAATTGTGCTACTTATGAAGTTGATGATGTCTTGGATGAATGTGCA
GCGAAAGCGATCAGGTTGCAGGAAAAATCCCGAAGAATTGGATGCATTTCAATGCCATCT
GGATTTACCTTGGAGAATCTTTTGTTTCGTCGACAGATAGGGAAAAAGGTTAAAGATGCC
ATCAGGAAACTAGATGGAATTGCCGAGGAACGTCTTAAATTTCATTTGTCTGAAGTGACT
TCGAAGAAACGATTATCCACGACAGACGAAGTACGTGAAACTGGCTTTGTTTTAACTTCA
GCAGAAGTCTACGGAAGGGACAATGACAAAAGGAAGATTGTCGAAATCTTAACGAAGCAT
GTGGATGATTTTCAAGAGCTTTTGGTTCTCCCTATAGTTGGAATGGGAGGTCTTGGAAAG
ACTACTCTTGCTCAATTAATTTACAATGATGTGTTGGTACATGAACATTTCGATTTGAAA
ATTTGGGTTTGCGTGTCACATAATTTTGACGAGAAGAGGTTGATAAGAGCAATCCTAGAA
GCCATAGTTGGGAAAGATATAAATGCTTCCGAGTTAGCTTCGTTACAAAGTCAGCTCATA
AACTTGTTGAGAGGGAAACGATATTTACTCATTTTGGATGATGTTTGGAATGAAGATCAG
GAGAAATGGGATAAATTAAAAGCCTTACTAACAATTGGTTCGAGAGGTACTTCAGTTATT
ACCACTACTCGTCTAGAAAAGGTTGCTTCAATTATGGGAACGGTACAGCCACATCGTTTA
TCCTGCTTGTCGGAGTATGACTGTTGGTTGTTGTTCAAGCAACGTGCATTTGGTCTCGAC
AGAAAAGAAAGCTCCAAACTTGTGGATATTGGAAAAGAGATTGTAAGAAGATGTTGTGGG
GTTCCTCTGGCTGCTAAAGCTCTAGGAAGTCTTTTGCGCTTTAAGAACGATGAAAAAGAA
TGGTTGTTTGTCAGAGATAGTGATTTTTGGAATTTGCCACAAGACGAAAGCTCAATCTTG
CCTGCTCTAAGGTTGAGCTATTTTCACCTTCCTCAAGATTTGAGACACTGTTTTGCTTAT
TGCGCGATATTTGAGAAGGGCTCCAAAATAGACAAAGAAGAGCTAATTTATTTCTGGATG
GCCAATGGATTTATCTCATCGGAGGGAAACTTGGAACCTGAGGATAAAGGTAATGAAGTA
TGGAATGAATTATACTGGAGATCTTTGTTCCAAGAAGTGCAACAAACTTCAGATGGGAAG
ATGTTGTTTAAGATACATGATCTTGTTCATGACCTGGCCCAATCTATAATGGATGATGGA
ATTCATGCAACAAAACTTGAAGGAGGGGAAAAGATATCGACAAGCAGAATTCGACATGCA
ACAATACATGCCGAAGATAAGTCATTTCTTGCTTTTCCTAAAAGTACTATGCCATACAAC
CCTTCGACAATCGCAATGTATGGTTCTTTAAGGGTGTTGATTTTTTGCTCAGTTCAGTTA
AAGGAATTGCCATCTGCAATTGGAAATCTAATACATTTAAGGTATTTGGACCTTTTCAGT
ACATGTGTTGAGAGTCTTCCTCAGAGTATATGTTCTCTTCAGAATCTGCAGATGCTAAGT
GTAGAAGATTGTTGCTTACTTCGTGTTTTACCGAAACATCTGAATTATCTGAGAAATCTT
CGACATCTTCGGCTAAGAGGCTGTCCATTGAGTCACATGCCTCCTAATATAGCACAATTG
ACACACCTCAAGACGTTAAACAAGTTTGTCGTAGGGAAAAAAAGATGTTCCAAGCTTAGT
GAATTGCGAGACTTGAATCTTCAAGGAGAACTAGTTATTGAGCACCTTGAGAGGGTTGAA
AATCATATGGGGGCGAAAGAAGCTCTAATTTCAAAGCGAAACCTCCACAGTTTAGCTTTG
TACTGGAACCATTCCGTTCGGTGTGAGTCATCAAAGGATGTTGATCTGCAGGTTCTTGAA
GCACTAGAACCTCATTCCGACCTTAAGCATTTGAAGGTATCCGGTTTCAAAAGTACATGC
TTGGCAAGTTGGATGAGGGCTTCAGTTTTGAGAACAATCATTACCCTTTATCTTCATGAT
TGTAAATACTGCTTGCATCTCTCTCAACTAGCTCAGCTTCCTTGTTTGAAATATCTTTCG
CTGAGGGGAATTCATGTAGAGTACATTGACAATGACGTTGAAAGCGGAGTATCCCAATTA
AGAAAGTTCCCGTCCTTGGAATCACTTGAGATGTGCAAGCTCCCAAATTTAAAAGGAGTT
TCAATCGAAGAAGGAGAAGAACAATTTCCGAGTCTTCACGAAATGTGGATTGAAAACTGC
CCTTTGCTGACATTTCCATGCCTTGTAACACTCAGAAATTTGAGAATTATGAAATGCTCA
AACATGACTCTAGCCTCTATCTCTAATCTTTGCGGTCTAACCTGCTTAGAAATTGCTAAC
AACAAGGAACTAACTTCTTTCCCTGAAGAGGTGCTAACGAACCTCACCGATCTTGAAATA
TTGACGATTATGGATTTCTCAAAGCTGGAAGTACTACCAAACAACCTGGCAAGCCTCACT
GCATTGAAGTCCCTGGATATTGGTTACTGCCACCAACTAGAGTCTCTACCCGAGCAGGGA
TTGCAAGGCCTCACCTCTGTCCGTAAATTGTCAGTCAGATGCTCTGATAGATTGAAATAT
CTGTCTGAAGGATTTCGGCACCTAGCTTCTCTGGAGGAACTTGAAATTTTTGGGTGTCCA
AAGTTGGTTTCTTTTCCACAAGAGATTAAACACCTGAATTCCCTTCACCGCGTTCACCTT
GATGGTCTGCCATTGTTCCACTCTAGAGAAGATACTGTTATTCACCCTGAGGAGTTGGGT
TTCTGGCAACTGCCTGAGGCTTTACGGCATGTCCACAATCTGCAATCTCTTTCTGTATGT
AGATTCTCAAGTTTGACTTTATTGCCTGAGTGGTTAGGCGAACTTACGTTTCTCAAGGAA
CTGAACATAGTACAGTGTGATAATCTTGCCTCACTGCCTGAGTGTATGGAGAGAATGAAC
CTCCAGTCCTTGAACATTTTGGGCTGTGCAATATTGGAGAAGCGTTGCAAACCGGGACAA
GGAGAAGACTGGTACAAGATTGAGCACATTCCAAAAGTGAAAATCAGTCAAAATTGTGAT
TTTCTTAGTATCAACTTGTCATCAGAGAGGTTCAGTGGTCTAAGGAGATTTCACTTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400009000
PEP Infomation

pacid=37463037 transcript=PGSC0003DMT400012963 locus=PGSC0003DMG400005052 ID=PGSC0003DMT400012963.v4.03 annot-version=v4.03
Sequence

MAEAFVEVLLQNLSSFIQKELGLFYGVDEELRKLSSLLSTIKAVLQDADQEQLKEKAIRN
WLQKLNCATYEVDDVLDECAAKAIRLQEKSRRIGCISMPSGFTLENLLFRRQIGKKVKDA
IRKLDGIAEERLKFHLSEVTSKKRLSTTDEVRETGFVLTSAEVYGRDNDKRKIVEILTKH
VDDFQELLVLPIVGMGGLGKTTLAQLIYNDVLVHEHFDLKIWVCVSHNFDEKRLIRAILE
AIVGKDINASELASLQSQLINLLRGKRYLLILDDVWNEDQEKWDKLKALLTIGSRGTSVI
TTTRLEKVASIMGTVQPHRLSCLSEYDCWLLFKQRAFGLDRKESSKLVDIGKEIVRRCCG
VPLAAKALGSLLRFKNDEKEWLFVRDSDFWNLPQDESSILPALRLSYFHLPQDLRHCFAY
CAIFEKGSKIDKEELIYFWMANGFISSEGNLEPEDKGNEVWNELYWRSLFQEVQQTSDGK
MLFKIHDLVHDLAQSIMDDGIHATKLEGGEKISTSRIRHATIHAEDKSFLAFPKSTMPYN
PSTIAMYGSLRVLIFCSVQLKELPSAIGNLIHLRYLDLFSTCVESLPQSICSLQNLQMLS
VEDCCLLRVLPKHLNYLRNLRHLRLRGCPLSHMPPNIAQLTHLKTLNKFVVGKKRCSKLS
ELRDLNLQGELVIEHLERVENHMGAKEALISKRNLHSLALYWNHSVRCESSKDVDLQVLE
ALEPHSDLKHLKVSGFKSTCLASWMRASVLRTIITLYLHDCKYCLHLSQLAQLPCLKYLS
LRGIHVEYIDNDVESGVSQLRKFPSLESLEMCKLPNLKGVSIEEGEEQFPSLHEMWIENC
PLLTFPCLVTLRNLRIMKCSNMTLASISNLCGLTCLEIANNKELTSFPEEVLTNLTDLEI
LTIMDFSKLEVLPNNLASLTALKSLDIGYCHQLESLPEQGLQGLTSVRKLSVRCSDRLKY
LSEGFRHLASLEELEIFGCPKLVSFPQEIKHLNSLHRVHLDGLPLFHSREDTVIHPEELG
FWQLPEALRHVHNLQSLSVCRFSSLTLLPEWLGELTFLKELNIVQCDNLASLPECMERMN
LQSLNILGCAILEKRCKPGQGEDWYKIEHIPKVKISQNCDFLSINLSSERFSGLRRFHL*

Transcript Sequence

Transcript ID

PGSC0003DMT400012963
Transcript Infomation

pacid=37463037 locus=PGSC0003DMG400005052 ID=PGSC0003DMT400012963.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAGCTTTCGTTGAAGTTTTGTTACAAAACCTTAGCTCTTTTATTCAAAAGGAA
CTTGGATTGTTTTATGGCGTCGATGAAGAATTAAGAAAACTTTCAAGCTTGCTATCGACA
ATCAAGGCTGTCCTTCAGGATGCAGACCAGGAACAACTGAAAGAAAAGGCAATAAGAAAT
TGGTTGCAGAAGCTAAATTGTGCTACTTATGAAGTTGATGATGTCTTGGATGAATGTGCA
GCGAAAGCGATCAGGTTGCAGGAAAAATCCCGAAGAATTGGATGCATTTCAATGCCATCT
GGATTTACCTTGGAGAATCTTTTGTTTCGTCGACAGATAGGGAAAAAGGTTAAAGATGCC
ATCAGGAAACTAGATGGAATTGCCGAGGAACGTCTTAAATTTCATTTGTCTGAAGTGACT
TCGAAGAAACGATTATCCACGACAGACGAAGTACGTGAAACTGGCTTTGTTTTAACTTCA
GCAGAAGTCTACGGAAGGGACAATGACAAAAGGAAGATTGTCGAAATCTTAACGAAGCAT
GTGGATGATTTTCAAGAGCTTTTGGTTCTCCCTATAGTTGGAATGGGAGGTCTTGGAAAG
ACTACTCTTGCTCAATTAATTTACAATGATGTGTTGGTACATGAACATTTCGATTTGAAA
ATTTGGGTTTGCGTGTCACATAATTTTGACGAGAAGAGGTTGATAAGAGCAATCCTAGAA
GCCATAGTTGGGAAAGATATAAATGCTTCCGAGTTAGCTTCGTTACAAAGTCAGCTCATA
AACTTGTTGAGAGGGAAACGATATTTACTCATTTTGGATGATGTTTGGAATGAAGATCAG
GAGAAATGGGATAAATTAAAAGCCTTACTAACAATTGGTTCGAGAGGTACTTCAGTTATT
ACCACTACTCGTCTAGAAAAGGTTGCTTCAATTATGGGAACGGTACAGCCACATCGTTTA
TCCTGCTTGTCGGAGTATGACTGTTGGTTGTTGTTCAAGCAACGTGCATTTGGTCTCGAC
AGAAAAGAAAGCTCCAAACTTGTGGATATTGGAAAAGAGATTGTAAGAAGATGTTGTGGG
GTTCCTCTGGCTGCTAAAGCTCTAGGAAGTCTTTTGCGCTTTAAGAACGATGAAAAAGAA
TGGTTGTTTGTCAGAGATAGTGATTTTTGGAATTTGCCACAAGACGAAAGCTCAATCTTG
CCTGCTCTAAGGTTGAGCTATTTTCACCTTCCTCAAGATTTGAGACACTGTTTTGCTTAT
TGCGCGATATTTGAGAAGGGCTCCAAAATAGACAAAGAAGAGCTAATTTATTTCTGGATG
GCCAATGGATTTATCTCATCGGAGGGAAACTTGGAACCTGAGGATAAAGGTAATGAAGTA
TGGAATGAATTATACTGGAGATCTTTGTTCCAAGAAGTGCAACAAACTTCAGATGGGAAG
ATGTTGTTTAAGATACATGATCTTGTTCATGACCTGGCCCAATCTATAATGGATGATGGA
ATTCATGCAACAAAACTTGAAGGAGGGGAAAAGATATCGACAAGCAGAATTCGACATGCA
ACAATACATGCCGAAGATAAGTCATTTCTTGCTTTTCCTAAAAGTACTATGCCATACAAC
CCTTCGACAATCGCAATGTATGGTTCTTTAAGGGTGTTGATTTTTTGCTCAGTTCAGTTA
AAGGAATTGCCATCTGCAATTGGAAATCTAATACATTTAAGGTATTTGGACCTTTTCAGT
ACATGTGTTGAGAGTCTTCCTCAGAGTATATGTTCTCTTCAGAATCTGCAGATGCTAAGT
GTAGAAGATTGTTGCTTACTTCGTGTTTTACCGAAACATCTGAATTATCTGAGAAATCTT
CGACATCTTCGGCTAAGAGGCTGTCCATTGAGTCACATGCCTCCTAATATAGCACAATTG
ACACACCTCAAGACGTTAAACAAGTTTGTCGTAGGGAAAAAAAGATGTTCCAAGCTTAGT
GAATTGCGAGACTTGAATCTTCAAGGAGAACTAGTTATTGAGCACCTTGAGAGGGTTGAA
AATCATATGGGGGCGAAAGAAGCTCTAATTTCAAAGCGAAACCTCCACAGTTTAGCTTTG
TACTGGAACCATTCCGTTCGGTGTGAGTCATCAAAGGATGTTGATCTGCAGGTTCTTGAA
GCACTAGAACCTCATTCCGACCTTAAGCATTTGAAGGTATCCGGTTTCAAAAGTACATGC
TTGGCAAGTTGGATGAGGGCTTCAGTTTTGAGAACAATCATTACCCTTTATCTTCATGAT
TGTAAATACTGCTTGCATCTCTCTCAACTAGCTCAGCTTCCTTGTTTGAAATATCTTTCG
CTGAGGGGAATTCATGTAGAGTACATTGACAATGACGTTGAAAGCGGAGTATCCCAATTA
AGAAAGTTCCCGTCCTTGGAATCACTTGAGATGTGCAAGCTCCCAAATTTAAAAGGAGTT
TCAATCGAAGAAGGAGAAGAACAATTTCCGAGTCTTCACGAAATGTGGATTGAAAACTGC
CCTTTGCTGACATTTCCATGCCTTGTAACACTCAGAAATTTGAGAATTATGAAATGCTCA
AACATGACTCTAGCCTCTATCTCTAATCTTTGCGGTCTAACCTGCTTAGAAATTGCTAAC
AACAAGGAACTAACTTCTTTCCCTGAAGAGGTGCTAACGAACCTCACCGATCTTGAAATA
TTGACGATTATGGATTTCTCAAAGCTGGAAGTACTACCAAACAACCTGGCAAGCCTCACT
GCATTGAAGTCCCTGGATATTGGTTACTGCCACCAACTAGAGTCTCTACCCGAGCAGGGA
TTGCAAGGCCTCACCTCTGTCCGTAAATTGTCAGTCAGATGCTCTGATAGATTGAAATAT
CTGTCTGAAGGATTTCGGCACCTAGCTTCTCTGGAGGAACTTGAAATTTTTGGGTGTCCA
AAGTTGGTTTCTTTTCCACAAGAGATTAAACACCTGAATTCCCTTCACCGCGTTCACCTT
GATGGTCTGCCATTGTTCCACTCTAGAGAAGATACTGTTATTCACCCTGAGGAGTTGGGT
TTCTGGCAACTGCCTGAGGCTTTACGGCATGTCCACAATCTGCAATCTCTTTCTGTATGT
AGATTCTCAAGTTTGACTTTATTGCCTGAGTGGTTAGGCGAACTTACGTTTCTCAAGGAA
CTGAACATAGTACAGTGTGATAATCTTGCCTCACTGCCTGAGTGTATGGAGAGAATGAAC
CTCCAGTCCTTGAACATTTTGGGCTGTGCAATATTGGAGAAGCGTTGCAAACCGGGACAA
GGAGAAGACTGGTACAAGATTGAGCACATTCCAAAAGTGAAAATCAGTCAAAATTGTGAT
TTTCTTAGTATCAACTTGTCATCAGAGAGGTTCAGTGGTCTAAGGAGATTTCACTTGTAG