Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012933
CDS Infomation

pacid=37462636 polypeptide=PGSC0003DMP400008982 locus=PGSC0003DMG400005040 ID=PGSC0003DMT400012933.v4.03 annot-version=v4.03
Sequence

ATGTCAAGATTCTTTAGAATAGGTAGTATTAAAAGAGTTGCACAATCCCTTGAAAAAAGT
CAGAGAAGTGCCTATTTAGGAGAAAAACATGGATTGCTTGGTAGGGTTGGGATATGTTCT
TCAAAGTACAGATTTTATGGACAATACACATCTTCTGCTAGAGGATATGCTTCATTTACT
GGGTACAGAGTACAAAACAGTATGCTCAACAATTTTCACAAGATACAGTCAGCCACTTCG
TCGAGCAATCCTAAAGCACATCATGCTCGACTTGCTTGGAGGAGGTTCTTACTGATTTCT
TTTTACAGGGGGAAAACTTTTATTCCATTAAGTAAAATTGCTCAAGCAGTTAGTTTGGCT
CTGTGCCGCTCTGCAGTTGTTGTTCCTGGTATATTTGCCTTAAGATATGGAAAGAATGTA
GCAGTGGCAGAGGCAGAGGCCATGCCGGTTGTGGACCTTTCCTCGCCAAGGAATACATTT
TATCTACGTGCACAAGATAGTCATGTCTTATTTACTCGACTAATCCTTTCAGCATTTGAA
GGTGCTGTTCTTTTGGTGAGAGCTTTTTATTTGGCAATCCTGTTCTCTCCAAGCATTGCA
ATGGCGCCATTTGCAGAAGTTCTGGGACCTAGGTACAGGAAAATATGGCTTCAGGTTGTT
CACCGGACTCTTGAAAGAGCAGGTCCAGCATTTATAAAATGGGGCCAATGGGCGGCTACA
CGGCCGGATCTGTTCCCAAGAGACTTGTGTGCTGAGCTGTCAAAGCTTCATTCAAAAGCT
CCTGAACATAACTGGGCCTACACAAAAAAAGCTGTTGAAAAAGCTTTTGGTCGCAAGCTT
TCCGAGATTTTTGACAATTTTGAGCAGACCCCTGTAGCATCTGGAAGTATAGCTCAAGTG
CATCGTGCTTCCTTGAAGTCTAGATATCCTGGTCGTGAGAACAAGCCCATGAAAGTTGCA
GTGAAGGTTAGACACCCTGGAGTTGGTGAATCAATTAGAAGAGACTTTGAGATTATCAAT
GTAGTTGCAAAATTGTCAGGGTTCATACCATCACTTAAGTGGCTTAGATTGGATGAAAGT
GTCCAGCAATTTGCTGTCTTTATGATGTCACAAGTTGACCTAGCAAGAGAAGCTGCCCAT
CTAAGTCGTTTTATTTATAATTTTCGAAGATGGAAAAATGTCTCTTTTCCTAAGCCTGTT
TATCCATTAGTACATCCTGCCGTGCTGGTGGAAACTTTTGAGGAAGGAGAAAGTGTCGCC
CACTATGTTGATGAACTTCAGGGTCATGAGCGACTTAAGAGTGCTCTTGCTCATATTGGA
ACTCATGCACTTCTCAAGATGCTTCTGGTTGACAACTTCATGCATGCAGACATGCATCCA
GGAAATATTCTTGTCCGTGTACCAAAGCACAAGTCCTCTCAGAAACGTATATTCAAGTCA
AAGCCACATGTGATTTTCCTTGATGTAGGCATGACTGCTGAACTTTCTCAGAACGATAAG
TTGAATTTGCTTGAATTCTTCAAGGCTGTTGCTCGTCGAGATGGTTCCTCTGCAGCGCAG
TGCACTTTAAATCTATCAAAGAAGCAGAATTGCCCTAATCCAGATGCCTTCATTAAGGAA
GTGAAAGAGTCTTTTGATTTTTGGGGGACTCCGGAAGGAGATTTAGTCCATCCTGCGGAC
TGCATGACGCAACTACTTGAACAAGTTAGGCGTCACAGAGTGAACATTGATGGCAATGTG
TGCACTGCGATGGTTACAACTTTAGTCCTGGAGGGCTGGCAACGGAAACTTGATCCAGAT
TACAATATAATGCACACACTACAGACCTTGCTTCTCAAAGCCGACTGGGCAAAGGATCTT
TCCTACACAATCGAACAGGTCATGGCTCCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400008982
PEP Infomation

pacid=37462636 transcript=PGSC0003DMT400012933 locus=PGSC0003DMG400005040 ID=PGSC0003DMT400012933.v4.03 annot-version=v4.03
Sequence

MSRFFRIGSIKRVAQSLEKSQRSAYLGEKHGLLGRVGICSSKYRFYGQYTSSARGYASFT
GYRVQNSMLNNFHKIQSATSSSNPKAHHARLAWRRFLLISFYRGKTFIPLSKIAQAVSLA
LCRSAVVVPGIFALRYGKNVAVAEAEAMPVVDLSSPRNTFYLRAQDSHVLFTRLILSAFE
GAVLLVRAFYLAILFSPSIAMAPFAEVLGPRYRKIWLQVVHRTLERAGPAFIKWGQWAAT
RPDLFPRDLCAELSKLHSKAPEHNWAYTKKAVEKAFGRKLSEIFDNFEQTPVASGSIAQV
HRASLKSRYPGRENKPMKVAVKVRHPGVGESIRRDFEIINVVAKLSGFIPSLKWLRLDES
VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKNVSFPKPVYPLVHPAVLVETFEEGESVA
HYVDELQGHERLKSALAHIGTHALLKMLLVDNFMHADMHPGNILVRVPKHKSSQKRIFKS
KPHVIFLDVGMTAELSQNDKLNLLEFFKAVARRDGSSAAQCTLNLSKKQNCPNPDAFIKE
VKESFDFWGTPEGDLVHPADCMTQLLEQVRRHRVNIDGNVCTAMVTTLVLEGWQRKLDPD
YNIMHTLQTLLLKADWAKDLSYTIEQVMAP*

Transcript Sequence

Transcript ID

PGSC0003DMT400012933
Transcript Infomation

pacid=37462636 locus=PGSC0003DMG400005040 ID=PGSC0003DMT400012933.v4.03 annot-version=v4.03
Sequence

ATGTCAAGATTCTTTAGAATAGGTAGTATTAAAAGAGTTGCACAATCCCTTGAAAAAAGT
CAGAGAAGTGCCTATTTAGGAGAAAAACATGGATTGCTTGGTAGGGTTGGGATATGTTCT
TCAAAGTACAGATTTTATGGACAATACACATCTTCTGCTAGAGGATATGCTTCATTTACT
GGGTACAGAGTACAAAACAGTATGCTCAACAATTTTCACAAGATACAGTCAGCCACTTCG
TCGAGCAATCCTAAAGCACATCATGCTCGACTTGCTTGGAGGAGGTTCTTACTGATTTCT
TTTTACAGGGGGAAAACTTTTATTCCATTAAGTAAAATTGCTCAAGCAGTTAGTTTGGCT
CTGTGCCGCTCTGCAGTTGTTGTTCCTGGTATATTTGCCTTAAGATATGGAAAGAATGTA
GCAGTGGCAGAGGCAGAGGCCATGCCGGTTGTGGACCTTTCCTCGCCAAGGAATACATTT
TATCTACGTGCACAAGATAGTCATGTCTTATTTACTCGACTAATCCTTTCAGCATTTGAA
GGTGCTGTTCTTTTGGTGAGAGCTTTTTATTTGGCAATCCTGTTCTCTCCAAGCATTGCA
ATGGCGCCATTTGCAGAAGTTCTGGGACCTAGGTACAGGAAAATATGGCTTCAGGTTGTT
CACCGGACTCTTGAAAGAGCAGGTCCAGCATTTATAAAATGGGGCCAATGGGCGGCTACA
CGGCCGGATCTGTTCCCAAGAGACTTGTGTGCTGAGCTGTCAAAGCTTCATTCAAAAGCT
CCTGAACATAACTGGGCCTACACAAAAAAAGCTGTTGAAAAAGCTTTTGGTCGCAAGCTT
TCCGAGATTTTTGACAATTTTGAGCAGACCCCTGTAGCATCTGGAAGTATAGCTCAAGTG
CATCGTGCTTCCTTGAAGTCTAGATATCCTGGTCGTGAGAACAAGCCCATGAAAGTTGCA
GTGAAGGTTAGACACCCTGGAGTTGGTGAATCAATTAGAAGAGACTTTGAGATTATCAAT
GTAGTTGCAAAATTGTCAGGGTTCATACCATCACTTAAGTGGCTTAGATTGGATGAAAGT
GTCCAGCAATTTGCTGTCTTTATGATGTCACAAGTTGACCTAGCAAGAGAAGCTGCCCAT
CTAAGTCGTTTTATTTATAATTTTCGAAGATGGAAAAATGTCTCTTTTCCTAAGCCTGTT
TATCCATTAGTACATCCTGCCGTGCTGGTGGAAACTTTTGAGGAAGGAGAAAGTGTCGCC
CACTATGTTGATGAACTTCAGGGTCATGAGCGACTTAAGAGTGCTCTTGCTCATATTGGA
ACTCATGCACTTCTCAAGATGCTTCTGGTTGACAACTTCATGCATGCAGACATGCATCCA
GGAAATATTCTTGTCCGTGTACCAAAGCACAAGTCCTCTCAGAAACGTATATTCAAGTCA
AAGCCACATGTGATTTTCCTTGATGTAGGCATGACTGCTGAACTTTCTCAGAACGATAAG
TTGAATTTGCTTGAATTCTTCAAGGCTGTTGCTCGTCGAGATGGTTCCTCTGCAGCGCAG
TGCACTTTAAATCTATCAAAGAAGCAGAATTGCCCTAATCCAGATGCCTTCATTAAGGAA
GTGAAAGAGTCTTTTGATTTTTGGGGGACTCCGGAAGGAGATTTAGTCCATCCTGCGGAC
TGCATGACGCAACTACTTGAACAAGTTAGGCGTCACAGAGTGAACATTGATGGCAATGTG
TGCACTGCGATGGTTACAACTTTAGTCCTGGAGGGCTGGCAACGGAAACTTGATCCAGAT
TACAATATAATGCACACACTACAGACCTTGCTTCTCAAAGCCGACTGGGCAAAGGATCTT
TCCTACACAATCGAACAGGTCATGGCTCCATGA