Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012900
CDS Infomation

pacid=37446493 polypeptide=PGSC0003DMP400008957 locus=PGSC0003DMG400005021 ID=PGSC0003DMT400012900.v4.03 annot-version=v4.03
Sequence

ATGGCAACTTCTATCGGCATTAACTACGGTCAGATTGCCGATAATCTCCCGCCTCCGGAG
AAAGTAGTTCCATTAGTGAAGTCCATGGGAGCAACCAGAGTGAAACTCTACGACGCCGAT
CCACATGTCCTCAAAGCATTTGCAAATTCTGGTGTTGAGTTTATTGTCAGTCTCGGCAAT
GAGTACCTTTCCGATATGAAGGATCCTGCTAAAGCTCAGGCGTGGGTTAAAACTAACGTC
CAAGCTTATTTACCGGCGACGAAGATCACTTGCATCGCCGTTGGAAATGAAGTGCTAACT
TTTAACAACACTGCACTTTCCGACAATCTACTACCGGCGATGGAAAATGTTTACGCCGCT
CTTGTTAGTATGAACTTAGATAAGCAAGTGAGTGTAACTACTGCACATTCAGTTGCCATT
CTCGAGACTTCCTACCCGCCGTCCTCCGGAGCTTTCCGTCGAGATCTTGTTAGCTGTATT
ACTCAGGTGGTGGATTTCCATTGTAAAACTGGTTCGCCGTTTTTAATCAATGCTTATCCT
TATTTTGCGTACAAGGCAGATCCAAAGCAGGTGCAGCTGGATTTCGTGCTGTTTCAGCCT
AATCAGGGGATTGTTGATCCAGTTACCAATCTTCATTACGATAACATGCTTTTCGCCCAA
ATCGATGCGGTTCACTCTGCTTTAGCTTCAATTGGCTACAAAAATGTCTGCGTTCAGATC
TCGGAGACAGGTTGGCCGTCGAAAGGAGACGCCGATGAGCTCGGAGCTACGCCAGATAAT
GCGAGGAAATATAATTGCAATCTTATTAAACTTGTGAGTCAAAAGAAGGGAACTCCGTTG
AAGCCTAACAGCAATTTGAACATATACGTCTTTGCTTTGTTTAACGAGAACTTGAAACCT
GGCCCTATGTCGGAGCGTAACTATGGTCTTTTCAAGCCGGACGGCACACCGTCGTATCCC
TTAGGATTCGCCGGTGTCAGCACTAATAGCAGCTCCGGTAGAAGTCCGGCAACTGGCAGC
GGTTCTACAACACCGACGTCGTGGTCACCGCAGGACGGAAGTTCCTCTCCCGGATATATG
TCCATTACTTCTAATTCGGGGAGAGGTCTATTTTGCTGGAAATCCTGGATTATGCAACTC
CACATCATAGTGGGTTCAATTTTACTGCTATTTTCTCAACTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008957
PEP Infomation

pacid=37446493 transcript=PGSC0003DMT400012900 locus=PGSC0003DMG400005021 ID=PGSC0003DMT400012900.v4.03 annot-version=v4.03
Sequence

MATSIGINYGQIADNLPPPEKVVPLVKSMGATRVKLYDADPHVLKAFANSGVEFIVSLGN
EYLSDMKDPAKAQAWVKTNVQAYLPATKITCIAVGNEVLTFNNTALSDNLLPAMENVYAA
LVSMNLDKQVSVTTAHSVAILETSYPPSSGAFRRDLVSCITQVVDFHCKTGSPFLINAYP
YFAYKADPKQVQLDFVLFQPNQGIVDPVTNLHYDNMLFAQIDAVHSALASIGYKNVCVQI
SETGWPSKGDADELGATPDNARKYNCNLIKLVSQKKGTPLKPNSNLNIYVFALFNENLKP
GPMSERNYGLFKPDGTPSYPLGFAGVSTNSSSGRSPATGSGSTTPTSWSPQDGSSSPGYM
SITSNSGRGLFCWKSWIMQLHIIVGSILLLFSQL*

Transcript Sequence

Transcript ID

PGSC0003DMT400012900
Transcript Infomation

pacid=37446493 locus=PGSC0003DMG400005021 ID=PGSC0003DMT400012900.v4.03 annot-version=v4.03
Sequence

ATGGCAACTTCTATCGGCATTAACTACGGTCAGATTGCCGATAATCTCCCGCCTCCGGAG
AAAGTAGTTCCATTAGTGAAGTCCATGGGAGCAACCAGAGTGAAACTCTACGACGCCGAT
CCACATGTCCTCAAAGCATTTGCAAATTCTGGTGTTGAGTTTATTGTCAGTCTCGGCAAT
GAGTACCTTTCCGATATGAAGGATCCTGCTAAAGCTCAGGCGTGGGTTAAAACTAACGTC
CAAGCTTATTTACCGGCGACGAAGATCACTTGCATCGCCGTTGGAAATGAAGTGCTAACT
TTTAACAACACTGCACTTTCCGACAATCTACTACCGGCGATGGAAAATGTTTACGCCGCT
CTTGTTAGTATGAACTTAGATAAGCAAGTGAGTGTAACTACTGCACATTCAGTTGCCATT
CTCGAGACTTCCTACCCGCCGTCCTCCGGAGCTTTCCGTCGAGATCTTGTTAGCTGTATT
ACTCAGGTGGTGGATTTCCATTGTAAAACTGGTTCGCCGTTTTTAATCAATGCTTATCCT
TATTTTGCGTACAAGGCAGATCCAAAGCAGGTGCAGCTGGATTTCGTGCTGTTTCAGCCT
AATCAGGGGATTGTTGATCCAGTTACCAATCTTCATTACGATAACATGCTTTTCGCCCAA
ATCGATGCGGTTCACTCTGCTTTAGCTTCAATTGGCTACAAAAATGTCTGCGTTCAGATC
TCGGAGACAGGTTGGCCGTCGAAAGGAGACGCCGATGAGCTCGGAGCTACGCCAGATAAT
GCGAGGAAATATAATTGCAATCTTATTAAACTTGTGAGTCAAAAGAAGGGAACTCCGTTG
AAGCCTAACAGCAATTTGAACATATACGTCTTTGCTTTGTTTAACGAGAACTTGAAACCT
GGCCCTATGTCGGAGCGTAACTATGGTCTTTTCAAGCCGGACGGCACACCGTCGTATCCC
TTAGGATTCGCCGGTGTCAGCACTAATAGCAGCTCCGGTAGAAGTCCGGCAACTGGCAGC
GGTTCTACAACACCGACGTCGTGGTCACCGCAGGACGGAAGTTCCTCTCCCGGATATATG
TCCATTACTTCTAATTCGGGGAGAGGTCTATTTTGCTGGAAATCCTGGATTATGCAACTC
CACATCATAGTGGGTTCAATTTTACTGCTATTTTCTCAACTGTAA