Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012866
CDS Infomation

pacid=37446247 polypeptide=PGSC0003DMP400008934 locus=PGSC0003DMG400005009 ID=PGSC0003DMT400012866.v4.03 annot-version=v4.03
Sequence

ATGGATCATCAGTGTCCATCTCCAATGAAGGCCACGTCTAATGGCATTTTTCAAGGTGAT
AATCCCCTGGATTTTGCACTGCCGTTGGCCATTTTACAGATATGTTTAGTTCTTGTCGTC
ACGAGAGGTCTTGCCTTTTTGCTGCGGCCGCTACGACAACCACGTGTAATTGCTGAGGTT
ATTGGAGGTATATTGCTGGGACCATCAGCTCTTGGTCGAAACAAAGGCTATTTGAATGCA
GTATTCCCACCGAAGAGCATCACCGTCTTAGACACTTTGGCAAACATTGGTCTCCTGTTC
TTTTTATTTCTAGCTGGCTTAGAACTAGATGTCAAGTCATTGCGTCAGAGTGGGAAAAAA
GTCCTTGCCATTGCTGTTACAGGAATTACTCTTCCGTTTGCTTTGGGAATCGGCACTTCA
TTTATTCTTCGAGGAACTATAAATAAAGGTGTAAATGCTACCGCATTTCTTGTATTCATG
GGTGTAGCGCTTTCCATAACTGCATTTCCTGTTCTGGCACGCATTTTGGCTGAGTTGAAA
CTCTTAACTACTGATGTTGGGCGAATGGCCATGTCTGCGGCAGCAATTAATGATGTGGCA
GCTTGGATTTTACTTGCACTTGCCATTGCCTTATCTGGTGATAATCTATCTCCTGTTGTG
CCACTTTGGGTTTTCCTCTGTGGTTGTGGTTTTGTCATTGGCGCCTATCTTATTGTGCCA
CCAATTTTTAAATGGATTTCGCGACGTTGCCACGAAGGTGAACCTGTGGATGAGCTGTAT
ATATGTGCTACTTTAGCTGCTGTACTTGCAGCTGGACTTGTCACGGATGTTATTGGGATT
CACGCGATGTTTGGGGCTTTCGTCATTGGAGTTCTACTTCCAAAAGAGGGGCCTTTTGCA
GGTGAACTGGTTGAAAAAGTTGAGGACCTTGTATCTGGTCTTTTCCTCCCATTATACTTT
GTCTCAAGTGGTCTAAAAACGAACGTTGCTACAATCCAAGGTATACAATCATGGGGTTTG
CTAGTTCTGGTCATATTTACAGCTTGTTTCGGGAAGATTGTTGGTACTTTTATAGTTTCC
CTTCTCTGGAAGATTCCCAAAAATGAAGCTCTTGCTCTTGGATTTCTTATGAACAGTAAG
GGACTAGTGGAACTGATTGTCCTTAATATTGGTAAAGATCGAAAGGTATTGAATGATCAG
ACTTTTGCTATCATGGTTATGATGGCTCTCTTCACGACCTTTATCACCACACCTCTGGTT
CTGGCTGTTTACAAACCAGCAAAAATGCTAAGCAAAGGCGACTATAAACATAGGAGAATA
GAAAGGAAAAATCCGAATACTGAACTGCGAATACTAACCTGCTTCCGTAGTTCTAGAAAT
ATTCCATCGGTCATTAATCTCCTTGAGGCCTCACGTGGAACCGAGAGGGGAGAAAGGCTT
TCTGTATACGCAATGCATCTCATGGAGTTCTCGGAGAGACCATCAGCTATCTTAATGGTA
CACAAGGCTAGACATAATGGCTTGCCCTTCTGGAATAAAGGTCAGCGGTCAGCTAACCAC
GTTGTTGTGGCGTTCGAGGCTTTCCAACAATTAAGTCAGGTCTCTGTGCGGCCAATGACA
TCAATCTCATCACTCTCTGACATGCATGAAGATATTTGCATTACTGCTGAGAAGAAAAAT
ATAGCAATGATAATTTTACCATATCACAAGAATCTGAGGCTTGACGGCTCATTTGAATCA
ACTCGACCTGATTTTCACTTGGTTAACAGGAGGGTTCTTGAACATGCTTCATGTTCAGTG
GGGATATTTGTTGATCGCGGACTTGGTGGTACTGCACAGATATCTGCAAGTAATGTTTCC
TTCTCTATTATCGTTCTATACTTTGGGGGTCATGATGATCGTGAAGCACTTGCTTATGGG
ACTCGTATGGCTGAGCATCCAGGAGTCGAGTTAACAGTCATTCGCTTCCTAGTGGAGTCA
GATTCCTCAGAAGAGATAGTAACAATACATACAGAAGGCACCTCTGCTGCAACATTAGTC
TCTGCTGATGAGGGGTTTCTCGCTGCTTTCAGAACGAGTATATCAGATGACAGTTCCATC
AAATATGAAGAGAAGACTGTTAGAAATGTGTCGGAAACAATTACTATCCTACGTGATTAC
AGTCGTTGCAGTTTGTTTCTGGTTGGTCGAAGGCCTGATGGCGTACTACCTCTTGCATTG
AGCCAGAGGATTGATTGTCCTGAACTCGGGCCAGTCGGGAGTTTGTTGACTTCACCGGAA
TACACCACAACAGCATCAGTCCTGGTGGTGCAACAGTATTATGATAACTTGTATGCAAAT
AGTTCACAACAGAGGGATGTAGCATCAGTTCCAGAGAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008934
PEP Infomation

pacid=37446247 transcript=PGSC0003DMT400012866 locus=PGSC0003DMG400005009 ID=PGSC0003DMT400012866.v4.03 annot-version=v4.03
Sequence

MDHQCPSPMKATSNGIFQGDNPLDFALPLAILQICLVLVVTRGLAFLLRPLRQPRVIAEV
IGGILLGPSALGRNKGYLNAVFPPKSITVLDTLANIGLLFFLFLAGLELDVKSLRQSGKK
VLAIAVTGITLPFALGIGTSFILRGTINKGVNATAFLVFMGVALSITAFPVLARILAELK
LLTTDVGRMAMSAAAINDVAAWILLALAIALSGDNLSPVVPLWVFLCGCGFVIGAYLIVP
PIFKWISRRCHEGEPVDELYICATLAAVLAAGLVTDVIGIHAMFGAFVIGVLLPKEGPFA
GELVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGIQSWGLLVLVIFTACFGKIVGTFIVS
LLWKIPKNEALALGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVMMALFTTFITTPLV
LAVYKPAKMLSKGDYKHRRIERKNPNTELRILTCFRSSRNIPSVINLLEASRGTERGERL
SVYAMHLMEFSERPSAILMVHKARHNGLPFWNKGQRSANHVVVAFEAFQQLSQVSVRPMT
SISSLSDMHEDICITAEKKNIAMIILPYHKNLRLDGSFESTRPDFHLVNRRVLEHASCSV
GIFVDRGLGGTAQISASNVSFSIIVLYFGGHDDREALAYGTRMAEHPGVELTVIRFLVES
DSSEEIVTIHTEGTSAATLVSADEGFLAAFRTSISDDSSIKYEEKTVRNVSETITILRDY
SRCSLFLVGRRPDGVLPLALSQRIDCPELGPVGSLLTSPEYTTTASVLVVQQYYDNLYAN
SSQQRDVASVPEN*

Transcript Sequence

Transcript ID

PGSC0003DMT400012866
Transcript Infomation

pacid=37446247 locus=PGSC0003DMG400005009 ID=PGSC0003DMT400012866.v4.03 annot-version=v4.03
Sequence

ATGGATCATCAGTGTCCATCTCCAATGAAGGCCACGTCTAATGGCATTTTTCAAGGTGAT
AATCCCCTGGATTTTGCACTGCCGTTGGCCATTTTACAGATATGTTTAGTTCTTGTCGTC
ACGAGAGGTCTTGCCTTTTTGCTGCGGCCGCTACGACAACCACGTGTAATTGCTGAGGTT
ATTGGAGGTATATTGCTGGGACCATCAGCTCTTGGTCGAAACAAAGGCTATTTGAATGCA
GTATTCCCACCGAAGAGCATCACCGTCTTAGACACTTTGGCAAACATTGGTCTCCTGTTC
TTTTTATTTCTAGCTGGCTTAGAACTAGATGTCAAGTCATTGCGTCAGAGTGGGAAAAAA
GTCCTTGCCATTGCTGTTACAGGAATTACTCTTCCGTTTGCTTTGGGAATCGGCACTTCA
TTTATTCTTCGAGGAACTATAAATAAAGGTGTAAATGCTACCGCATTTCTTGTATTCATG
GGTGTAGCGCTTTCCATAACTGCATTTCCTGTTCTGGCACGCATTTTGGCTGAGTTGAAA
CTCTTAACTACTGATGTTGGGCGAATGGCCATGTCTGCGGCAGCAATTAATGATGTGGCA
GCTTGGATTTTACTTGCACTTGCCATTGCCTTATCTGGTGATAATCTATCTCCTGTTGTG
CCACTTTGGGTTTTCCTCTGTGGTTGTGGTTTTGTCATTGGCGCCTATCTTATTGTGCCA
CCAATTTTTAAATGGATTTCGCGACGTTGCCACGAAGGTGAACCTGTGGATGAGCTGTAT
ATATGTGCTACTTTAGCTGCTGTACTTGCAGCTGGACTTGTCACGGATGTTATTGGGATT
CACGCGATGTTTGGGGCTTTCGTCATTGGAGTTCTACTTCCAAAAGAGGGGCCTTTTGCA
GGTGAACTGGTTGAAAAAGTTGAGGACCTTGTATCTGGTCTTTTCCTCCCATTATACTTT
GTCTCAAGTGGTCTAAAAACGAACGTTGCTACAATCCAAGGTATACAATCATGGGGTTTG
CTAGTTCTGGTCATATTTACAGCTTGTTTCGGGAAGATTGTTGGTACTTTTATAGTTTCC
CTTCTCTGGAAGATTCCCAAAAATGAAGCTCTTGCTCTTGGATTTCTTATGAACAGTAAG
GGACTAGTGGAACTGATTGTCCTTAATATTGGTAAAGATCGAAAGGTATTGAATGATCAG
ACTTTTGCTATCATGGTTATGATGGCTCTCTTCACGACCTTTATCACCACACCTCTGGTT
CTGGCTGTTTACAAACCAGCAAAAATGCTAAGCAAAGGCGACTATAAACATAGGAGAATA
GAAAGGAAAAATCCGAATACTGAACTGCGAATACTAACCTGCTTCCGTAGTTCTAGAAAT
ATTCCATCGGTCATTAATCTCCTTGAGGCCTCACGTGGAACCGAGAGGGGAGAAAGGCTT
TCTGTATACGCAATGCATCTCATGGAGTTCTCGGAGAGACCATCAGCTATCTTAATGGTA
CACAAGGCTAGACATAATGGCTTGCCCTTCTGGAATAAAGGTCAGCGGTCAGCTAACCAC
GTTGTTGTGGCGTTCGAGGCTTTCCAACAATTAAGTCAGGTCTCTGTGCGGCCAATGACA
TCAATCTCATCACTCTCTGACATGCATGAAGATATTTGCATTACTGCTGAGAAGAAAAAT
ATAGCAATGATAATTTTACCATATCACAAGAATCTGAGGCTTGACGGCTCATTTGAATCA
ACTCGACCTGATTTTCACTTGGTTAACAGGAGGGTTCTTGAACATGCTTCATGTTCAGTG
GGGATATTTGTTGATCGCGGACTTGGTGGTACTGCACAGATATCTGCAAGTAATGTTTCC
TTCTCTATTATCGTTCTATACTTTGGGGGTCATGATGATCGTGAAGCACTTGCTTATGGG
ACTCGTATGGCTGAGCATCCAGGAGTCGAGTTAACAGTCATTCGCTTCCTAGTGGAGTCA
GATTCCTCAGAAGAGATAGTAACAATACATACAGAAGGCACCTCTGCTGCAACATTAGTC
TCTGCTGATGAGGGGTTTCTCGCTGCTTTCAGAACGAGTATATCAGATGACAGTTCCATC
AAATATGAAGAGAAGACTGTTAGAAATGTGTCGGAAACAATTACTATCCTACGTGATTAC
AGTCGTTGCAGTTTGTTTCTGGTTGGTCGAAGGCCTGATGGCGTACTACCTCTTGCATTG
AGCCAGAGGATTGATTGTCCTGAACTCGGGCCAGTCGGGAGTTTGTTGACTTCACCGGAA
TACACCACAACAGCATCAGTCCTGGTGGTGCAACAGTATTATGATAACTTGTATGCAAAT
AGTTCACAACAGAGGGATGTAGCATCAGTTCCAGAGAATTAA