Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012864
CDS Infomation

pacid=37447950 polypeptide=PGSC0003DMP400008932 locus=PGSC0003DMG400005008 ID=PGSC0003DMT400012864.v4.03 annot-version=v4.03
Sequence

ATGGGGTTCATTTCAAACATCAATAATGAGCTTCTTTCTAAGGTAGCAACCAATAATGGA
CATGGAGAAAACTCAGCTTATTTTGATGGATGGAAAGCTTATGAAATTGATCCTTTCCAT
CCAACACAAAATCCTAATGGGGTTATTCAAATGGGTCTTGCAGAAAATCAGCTTTGCTTT
GATTTAATTCAAGAATGGGTGGTGAACAATCAAAAATCCTCCATTTGCACTGCTGGAGGC
TGTGAAGAATTCAAGGAAATTGCAATTTATCAAGACTATCATGGTTTGCCAGAATTTCGA
AGGGCAGTTGCAAGGTTCATGGAAAAAGTGAGAGGAGACAAAATTAAATTTGATGAAGAA
CGTATAGTAATGAGTGGAGGGGCAACTGGAGCTCATGAATTACTTGCCTTTTGCTTGGCT
GATCCTGGAGAGGCTTTTCTTGTTCCTACTCCCTATTATCCTGGATTTGATAGAGATTTG
AGTTGGAGAACTGGTGTACAACTTTTTCCCATCATTTGTGAAAGCTCCAACAATTTCAAA
GTCACAAAAAAAGCCTTAGAAGATGCATACAACAAAGCTCAAGAATCCAATATCACAATA
AAAGGCTTACTTTTAAACAATCCATCAAATCCATTAGGCACAATTTTAGACATGGAAACA
TTAAAAGATACAATAAGGTTCATCAACGATAAAAATATACACCTCGTATGCGACGAAATT
TACGCGGCCACGGTCTTCAACGAGCCCAAATTCATCAGTATTTCCGAAGTTATAATAAGC
GAAAATGTTCAATGCAACCTCGATTTAATACATATCGTGTATAGTCTATCGAAGGATTTA
GGGTTTCCCGGATTTAGAGTCGGAATTATTTACTCGTACAATGATGTTGTAACAAAATGT
GCTAGAAAAATGTCGAGTTTTGGGCTCGTATCGACGCAAACGCAGTATTTAATATCTAAC
ATGTTGTTAGATGATACGTTTATCGAGAAATTCGTTGTCGAGAGTCGTGAAAGGTTGGAG
AAAAGGCATGGGGTGTTTACTAAGGGACTTGAAAATATTGGAATTAACACGTTGGAGAGT
AACGCTGGGCTTTTTTGTTGGATGGATTTGAGAAGTTTACTTAAGGAAAATACATTTGAA
AGTGAAATTGAATTATGGAGAATGATTATTAATGATGTTAAACTTAATGTTTCACCAGGT
TGTTCTTTTCATTGTTGTGAGCCTGGTTGGTTTAGGGTTTGTTTTGCTAATATGGATGAT
GACACTATGAGGATTGCATTAAGGAGGATTGAGATTTTTATGGTACAATACAAAGGGATT
AATAATATTATTGAAGAGGGAATCGAGAAATCTCTTCCTATTGCACTTGGTTCAGTATCT
CTTAGGTCGATATCTGATAACAACGTCAGAGGGAGAAGGTCGATAGCAGAAGGTAACGAA
CTAGAGACTCTCTTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008932
PEP Infomation

pacid=37447950 transcript=PGSC0003DMT400012864 locus=PGSC0003DMG400005008 ID=PGSC0003DMT400012864.v4.03 annot-version=v4.03
Sequence

MGFISNINNELLSKVATNNGHGENSAYFDGWKAYEIDPFHPTQNPNGVIQMGLAENQLCF
DLIQEWVVNNQKSSICTAGGCEEFKEIAIYQDYHGLPEFRRAVARFMEKVRGDKIKFDEE
RIVMSGGATGAHELLAFCLADPGEAFLVPTPYYPGFDRDLSWRTGVQLFPIICESSNNFK
VTKKALEDAYNKAQESNITIKGLLLNNPSNPLGTILDMETLKDTIRFINDKNIHLVCDEI
YAATVFNEPKFISISEVIISENVQCNLDLIHIVYSLSKDLGFPGFRVGIIYSYNDVVTKC
ARKMSSFGLVSTQTQYLISNMLLDDTFIEKFVVESRERLEKRHGVFTKGLENIGINTLES
NAGLFCWMDLRSLLKENTFESEIELWRMIINDVKLNVSPGCSFHCCEPGWFRVCFANMDD
DTMRIALRRIEIFMVQYKGINNIIEEGIEKSLPIALGSVSLRSISDNNVRGRRSIAEGNE
LETLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400012864
Transcript Infomation

pacid=37447950 locus=PGSC0003DMG400005008 ID=PGSC0003DMT400012864.v4.03 annot-version=v4.03
Sequence

ATGGGGTTCATTTCAAACATCAATAATGAGCTTCTTTCTAAGGTAGCAACCAATAATGGA
CATGGAGAAAACTCAGCTTATTTTGATGGATGGAAAGCTTATGAAATTGATCCTTTCCAT
CCAACACAAAATCCTAATGGGGTTATTCAAATGGGTCTTGCAGAAAATCAGCTTTGCTTT
GATTTAATTCAAGAATGGGTGGTGAACAATCAAAAATCCTCCATTTGCACTGCTGGAGGC
TGTGAAGAATTCAAGGAAATTGCAATTTATCAAGACTATCATGGTTTGCCAGAATTTCGA
AGGGCAGTTGCAAGGTTCATGGAAAAAGTGAGAGGAGACAAAATTAAATTTGATGAAGAA
CGTATAGTAATGAGTGGAGGGGCAACTGGAGCTCATGAATTACTTGCCTTTTGCTTGGCT
GATCCTGGAGAGGCTTTTCTTGTTCCTACTCCCTATTATCCTGGATTTGATAGAGATTTG
AGTTGGAGAACTGGTGTACAACTTTTTCCCATCATTTGTGAAAGCTCCAACAATTTCAAA
GTCACAAAAAAAGCCTTAGAAGATGCATACAACAAAGCTCAAGAATCCAATATCACAATA
AAAGGCTTACTTTTAAACAATCCATCAAATCCATTAGGCACAATTTTAGACATGGAAACA
TTAAAAGATACAATAAGGTTCATCAACGATAAAAATATACACCTCGTATGCGACGAAATT
TACGCGGCCACGGTCTTCAACGAGCCCAAATTCATCAGTATTTCCGAAGTTATAATAAGC
GAAAATGTTCAATGCAACCTCGATTTAATACATATCGTGTATAGTCTATCGAAGGATTTA
GGGTTTCCCGGATTTAGAGTCGGAATTATTTACTCGTACAATGATGTTGTAACAAAATGT
GCTAGAAAAATGTCGAGTTTTGGGCTCGTATCGACGCAAACGCAGTATTTAATATCTAAC
ATGTTGTTAGATGATACGTTTATCGAGAAATTCGTTGTCGAGAGTCGTGAAAGGTTGGAG
AAAAGGCATGGGGTGTTTACTAAGGGACTTGAAAATATTGGAATTAACACGTTGGAGAGT
AACGCTGGGCTTTTTTGTTGGATGGATTTGAGAAGTTTACTTAAGGAAAATACATTTGAA
AGTGAAATTGAATTATGGAGAATGATTATTAATGATGTTAAACTTAATGTTTCACCAGGT
TGTTCTTTTCATTGTTGTGAGCCTGGTTGGTTTAGGGTTTGTTTTGCTAATATGGATGAT
GACACTATGAGGATTGCATTAAGGAGGATTGAGATTTTTATGGTACAATACAAAGGGATT
AATAATATTATTGAAGAGGGAATCGAGAAATCTCTTCCTATTGCACTTGGTTCAGTATCT
CTTAGGTCGATATCTGATAACAACGTCAGAGGGAGAAGGTCGATAGCAGAAGGTAACGAA
CTAGAGACTCTCTTGTGA