Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012825
CDS Infomation

pacid=37448724 polypeptide=PGSC0003DMP400008906 locus=PGSC0003DMG400004995 ID=PGSC0003DMT400012825.v4.03 annot-version=v4.03
Sequence

ATGGATATTCCTGCATGGAGAAGGGGACTAAGATTCCTGCTGATAAAGCAAAACATTCCA
GCTGCTGTTCATTCGATTGTGGTGGAGACCCCATCTGGAATGGCACGAACACACAGATTT
GCTACTGAAACAGTTGATCTTCCTGCACAAGAAGGTGAGAGAGTGACCATTGCTCTAGCA
GCACCACCAAATGTTTACCGAGAGGTGGGTCCATTAAAGTTCAATCCAAAAACTCCAAAC
GTCTACCCAGGAGAGCCTTTGTGCTTGACTAACCACAAAGATGGCCGTGAATCACCCTTA
CTAAGAGCACCCAAAAAAGATAAAACCCCATCTTTATTAAATCCTTCCATCCTTGTTCCT
CTTCTTGCTGTATTTGCCACTGGAGATGCTGCGTCTGGAATGATAGATCCCAACTTGCCT
CAGATAATAACAGTTGCTGCAGTTTCCTCAATCGCTCTTGGGGCCACGTTAAACAGCCTG
GTTTTTCCTCAATTCAGCAAGCTTCCTCAGAGATTAGTTGATACCATTGGTATGAGGCAG
CAACTCTTATCTCAGTATGATGTGCTCCAATCACGGATAAAGGAGTTGAAAGAATCTGCT
GAGAATGAGGTTTGGATGTTGGCTCGCATGTGCCAATTGGAAAACAAAATCTTTGCTGTT
GGAGAACCTGCTTATCGGGCCCGGAGAAGTAGAGTGAAAAGGGTGCGTGAAAGCTTAGAA
AACTCCCTTAGGAGAAGGATCGAGCTGATTGAAAGCTATGCAAGAATATCTTCCATTATA
GAAATTGAAGTAGAGATGGATTCAGATGTTCTTGCTGCTGAAGCAGCAGGCAATGCAGAA
AGTATTGCTGAGCAAATACAACAAATAATGGAGCTTGAAAATCTTGAGGATAAATGGAAA
ATCCAAGCAGAGGCAAACGATGAAGCCGAAAGGCTTCTCAGTTCTGAACCCTTAACTACA
GAAAATGTTTCAGAAAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400008906
PEP Infomation

pacid=37448724 transcript=PGSC0003DMT400012825 locus=PGSC0003DMG400004995 ID=PGSC0003DMT400012825.v4.03 annot-version=v4.03
Sequence

MDIPAWRRGLRFLLIKQNIPAAVHSIVVETPSGMARTHRFATETVDLPAQEGERVTIALA
APPNVYREVGPLKFNPKTPNVYPGEPLCLTNHKDGRESPLLRAPKKDKTPSLLNPSILVP
LLAVFATGDAASGMIDPNLPQIITVAAVSSIALGATLNSLVFPQFSKLPQRLVDTIGMRQ
QLLSQYDVLQSRIKELKESAENEVWMLARMCQLENKIFAVGEPAYRARRSRVKRVRESLE
NSLRRRIELIESYARISSIIEIEVEMDSDVLAAEAAGNAESIAEQIQQIMELENLEDKWK
IQAEANDEAERLLSSEPLTTENVSER*

Transcript Sequence

Transcript ID

PGSC0003DMT400012825
Transcript Infomation

pacid=37448724 locus=PGSC0003DMG400004995 ID=PGSC0003DMT400012825.v4.03 annot-version=v4.03
Sequence

ATGGATATTCCTGCATGGAGAAGGGGACTAAGATTCCTGCTGATAAAGCAAAACATTCCA
GCTGCTGTTCATTCGATTGTGGTGGAGACCCCATCTGGAATGGCACGAACACACAGATTT
GCTACTGAAACAGTTGATCTTCCTGCACAAGAAGGTGAGAGAGTGACCATTGCTCTAGCA
GCACCACCAAATGTTTACCGAGAGGTGGGTCCATTAAAGTTCAATCCAAAAACTCCAAAC
GTCTACCCAGGAGAGCCTTTGTGCTTGACTAACCACAAAGATGGCCGTGAATCACCCTTA
CTAAGAGCACCCAAAAAAGATAAAACCCCATCTTTATTAAATCCTTCCATCCTTGTTCCT
CTTCTTGCTGTATTTGCCACTGGAGATGCTGCGTCTGGAATGATAGATCCCAACTTGCCT
CAGATAATAACAGTTGCTGCAGTTTCCTCAATCGCTCTTGGGGCCACGTTAAACAGCCTG
GTTTTTCCTCAATTCAGCAAGCTTCCTCAGAGATTAGTTGATACCATTGGTATGAGGCAG
CAACTCTTATCTCAGTATGATGTGCTCCAATCACGGATAAAGGAGTTGAAAGAATCTGCT
GAGAATGAGGTTTGGATGTTGGCTCGCATGTGCCAATTGGAAAACAAAATCTTTGCTGTT
GGAGAACCTGCTTATCGGGCCCGGAGAAGTAGAGTGAAAAGGGTGCGTGAAAGCTTAGAA
AACTCCCTTAGGAGAAGGATCGAGCTGATTGAAAGCTATGCAAGAATATCTTCCATTATA
GAAATTGAAGTAGAGATGGATTCAGATGTTCTTGCTGCTGAAGCAGCAGGCAATGCAGAA
AGTATTGCTGAGCAAATACAACAAATAATGGAGCTTGAAAATCTTGAGGATAAATGGAAA
ATCCAAGCAGAGGCAAACGATGAAGCCGAAAGGCTTCTCAGTTCTGAACCCTTAACTACA
GAAAATGTTTCAGAAAGATGA