Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012735
CDS Infomation

pacid=37473098 polypeptide=PGSC0003DMP400008846 locus=PGSC0003DMG400004964 ID=PGSC0003DMT400012735.v4.03 annot-version=v4.03
Sequence

ATGGATTTCCCGGCTAACCGATTCTCCGGCCTAATTCCGGCGACTTTTAGTGCCGTTGTT
AACTCGTCATGTCCTCTTTTAGGCTTCATCGGACGACTTTCTCCGGTCACCGGTGCAGCA
TCTGCCGCCGCGATTATAATCGTGACCGTCGCTCTACCGGGGTTCCTTTACTTGAAGAAT
AACAAAAATAAACTTCCTGATGAACGACACAATGTCCGTGGCGAGTCGACGCACGCTCCG
ACGTTTGACCCTCTTCTGAATGAATTTGTTGGAGGACGTATAAGTGAGATAGATGTCTAT
TTTGATGCTGAATATGCAGAAGAGTTACAACTTCATGAAGTTTTAGTAGCCTCACTTTAC
ACTGGTCAAAGCAGTAATCATGCATCTGTATCTGCTCAAGGACTTTTGTCTGAAACAGAG
ATGTTGAATCTTGACAAAGAAGATGAAGATCAACTTAACAACTTCTGTGAGATTTGCTTG
GATGACAAAGAAGGATGGGAGATGTTTAAAAATTACAGTTGTTCTCATTCCTTCTGTTAT
GAGTGCACTGGCAAGCATATTATGGCAAGGATATCAGAGAAAGCAAAAGTAATTGGTTGC
CCTGGAATAAGTTGTGGTGCTGCTCTCGATGTTAATGCTTGTAGGTTCTTGATTCCCGAA
GAGGCACGGATCCAGTGGGATGAATCGGTATGTCAGTCAATGATTCTCGATTCCCAAAAA
CTGTACTGCCCTTTCCGTGATTGCTCAGCCCTGTTGGTAAATGATTCTGGGGAAAGTATA
GAAAGGAATAAATGCCCTTTGTGCAAGAGATCATTCTGTGCAGTATGTCGAGTTCCATGG
CATTCAGAATTTACATGCAAAGAATTCCTGAAACTGAATGCCAAAAAGAGGGGCAAAGGG
GAAGAAATGGTGAAGATACTTGCCAAGAAGAAAAACTGGCAGAAATGTCCTAATTGTAAA
GTATTTGTTGAGAGGACAGAGGGATGCATTCACATGACTTGCCGGTGTGAACATGAGTTC
TGCTACAAATGTGGTGCAAAATGGACTGCTGCTCATTATTGCCGTAAAAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400008846
PEP Infomation

pacid=37473098 transcript=PGSC0003DMT400012735 locus=PGSC0003DMG400004964 ID=PGSC0003DMT400012735.v4.03 annot-version=v4.03
Sequence

MDFPANRFSGLIPATFSAVVNSSCPLLGFIGRLSPVTGAASAAAIIIVTVALPGFLYLKN
NKNKLPDERHNVRGESTHAPTFDPLLNEFVGGRISEIDVYFDAEYAEELQLHEVLVASLY
TGQSSNHASVSAQGLLSETEMLNLDKEDEDQLNNFCEICLDDKEGWEMFKNYSCSHSFCY
ECTGKHIMARISEKAKVIGCPGISCGAALDVNACRFLIPEEARIQWDESVCQSMILDSQK
LYCPFRDCSALLVNDSGESIERNKCPLCKRSFCAVCRVPWHSEFTCKEFLKLNAKKRGKG
EEMVKILAKKKNWQKCPNCKVFVERTEGCIHMTCRCEHEFCYKCGAKWTAAHYCRKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400012735
Transcript Infomation

pacid=37473098 locus=PGSC0003DMG400004964 ID=PGSC0003DMT400012735.v4.03 annot-version=v4.03
Sequence

ATGGATTTCCCGGCTAACCGATTCTCCGGCCTAATTCCGGCGACTTTTAGTGCCGTTGTT
AACTCGTCATGTCCTCTTTTAGGCTTCATCGGACGACTTTCTCCGGTCACCGGTGCAGCA
TCTGCCGCCGCGATTATAATCGTGACCGTCGCTCTACCGGGGTTCCTTTACTTGAAGAAT
AACAAAAATAAACTTCCTGATGAACGACACAATGTCCGTGGCGAGTCGACGCACGCTCCG
ACGTTTGACCCTCTTCTGAATGAATTTGTTGGAGGACGTATAAGTGAGATAGATGTCTAT
TTTGATGCTGAATATGCAGAAGAGTTACAACTTCATGAAGTTTTAGTAGCCTCACTTTAC
ACTGGTCAAAGCAGTAATCATGCATCTGTATCTGCTCAAGGACTTTTGTCTGAAACAGAG
ATGTTGAATCTTGACAAAGAAGATGAAGATCAACTTAACAACTTCTGTGAGATTTGCTTG
GATGACAAAGAAGGATGGGAGATGTTTAAAAATTACAGTTGTTCTCATTCCTTCTGTTAT
GAGTGCACTGGCAAGCATATTATGGCAAGGATATCAGAGAAAGCAAAAGTAATTGGTTGC
CCTGGAATAAGTTGTGGTGCTGCTCTCGATGTTAATGCTTGTAGGTTCTTGATTCCCGAA
GAGGCACGGATCCAGTGGGATGAATCGGTATGTCAGTCAATGATTCTCGATTCCCAAAAA
CTGTACTGCCCTTTCCGTGATTGCTCAGCCCTGTTGGTAAATGATTCTGGGGAAAGTATA
GAAAGGAATAAATGCCCTTTGTGCAAGAGATCATTCTGTGCAGTATGTCGAGTTCCATGG
CATTCAGAATTTACATGCAAAGAATTCCTGAAACTGAATGCCAAAAAGAGGGGCAAAGGG
GAAGAAATGGTGAAGATACTTGCCAAGAAGAAAAACTGGCAGAAATGTCCTAATTGTAAA
GTATTTGTTGAGAGGACAGAGGGATGCATTCACATGACTTGCCGGTGTGAACATGAGTTC
TGCTACAAATGTGGTGCAAAATGGACTGCTGCTCATTATTGCCGTAAAAAATGA