Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012716
CDS Infomation

pacid=37475797 polypeptide=PGSC0003DMP400008830 locus=PGSC0003DMG400004955 ID=PGSC0003DMT400012716.v4.03 annot-version=v4.03
Sequence

ATGAAGAGGTTATGTGCTTTCAGCTTTGCTCGTCGACTCTTCAAACCTCGTACAACACAT
TCCCAGGAATCAAAGGAGAAAATGGAGCAGTCACCAATTGTCACTGTCGAGGACAACTTT
GATTTGCAGGAATCAAGGGAGAGGATGGAGATGTCACCAATGATCACTGCCAACATTAAC
TTTGATTCTCAGAGTGCAACGGAAAATGAGAAAGAGACTGGGAGTTATGCTGCTACTAAC
ATCATCCAAAACCATGAATTCTCGGATGGGCTGCACTCTTGGCATCCCAATTGTTGCGAT
GCTTTTGTGGTTCCAGCAAGTTCTGGATACCATAAAGGATTAGCGGCGAAGGAAGGCTGT
TGTTATGCTGTTGTCTCAAATCGTAAGGAATGTTGGCAAGGCTTAGAGCAAGACATTACA
AGCCGTGTATCAGCAGGTTCCACTTATACAGTTTCTGCTTGTGTTGGAGCCTCTGGTACT
TTTCAGGGTTCTGTTGAAGTCCTCGCCACGTTGAAACTAGTGTATCAAAATTCAGAAACA
AGCTATCTATTCATTGCAAAAAAAGCTGCTTCGGAGGAGTGTTGGGAGATATTAGAAGGT
TTGTTTTCTCTGTCAACCATGCCCGATCAAGTTATATTCTATCTCGAGGGACCTCCAGCT
GGAACTGACCTGCTCATAAAGTCAGTAGTGATATCATGTCCTAGTTCTACTGCTTGTGAT
AGTTCTGGCACATCATCTGTTTGTACCGATGATGATAACATCATAATAAACCCTCAATTT
GATGATGGTCTCAATAGTTGGTCTGGAAGAGGCTGCAAGGTGGCCTTGCATGACTCTATG
GCAGATGGGAAGATCACTCCAATGTCTGGAAAATCTTTTGCATCTGCAACGGAACGCACC
CAGAGCTGGAATGGAATTCAGCAAGATGTGACAGGAAGAGTGAAGCGAAAACTAGCTTAT
GAGGTATCTGCTGTTGTCCGGATCTACGGTAACAATGTCACTAGTGCAGATCTTCGCAGT
ACATTATATGTTAAAGCAGCTGACAACCGTGAACGGTACATAGGCATTGCCAGTGTCCAA
GCCACAGACAAAGACTGGGTGAAGTTGCAAGGGAAGTTTCTTATAAATGACTCCCCATCT
CAGGTTGTTGTCTTTTTAGAAGGTCCACCTGCAGGTACGGATATCCTCATTAACAATTTA
GTCATAAAGCATGCAGCTAAAGCTCCTCCTTCTTCTCCACCAGTTATTGAGGATGCTGGT
TTTGGTGTTAATATAATCACAAATACAAGTTTGAATGATGGCACAAATGGCTGGTTTCCA
CTTGGAAACTGTACAATGAGTGTTCAAACAGGCTCACCACATATTATGCCTCCAATGGCT
AGAGATTCCCTTGGTGCTCATGAGCCTTTAAGTGGCCGTTATATTCTTGTGGCTAATCGT
ACTCAAAACTGGATGGGTCCTGCTCAGATGATCACGGATAAAGTAAAACTCTATTTGACA
TATCAAGTATCTGCATGGGTTAAAATTGGACAAACATCAGGACCTCAGAATGTAAATGTT
GCCCTTGGAGTAGACAGCCAATGGGTAAATGGAGGCCAAGCTGAGATCAGCGATGATAGA
TGGCATGAAATTGGAGGATCTTTTAGAATTGAGAAGCCAGCTGCTAAGGTTATGGTTTAT
ATTCAGGGTCCTGCTGCTGGTGTAGACCTAATGGTTGCTGGGCTTCAAATTTTTCCCGTT
GACAGACGTGCACGGTTTAGACACTTGAAGAAACAAACTGCAAAGTTACGCAAGCGAGAC
GTCATGTTGAAGTTCTCTGGATCAGATTCAGGCAGTTTGTTTGGCACATTTGTTAGAGTT
AGACAACTGCAAAACAGCTTCCCCTTTGGATCAGCCATAAGCAGAACAAACATGGACAAT
GAAGACTTCAATGCCTTCTTTGTCAAGAATTTCAATTGGGCTGTGTTCGGAAATGAGCTG
AAATGGTACTGGACAGAAGCACAGCAAGGGAATTTGAACTACAAAGATGCTGATGAGCTC
CTGGACTTTTGCACAAAAAACAACATCCAAGTTCGAGGTCACTGTATCTTTTGGGAGGTG
GTGGGCACCGTTCAGGCATGGGTACAATCCTTGAACAAAAATGACTTGATGACGGCTGTT
CAAAACCGTTTAACAGGGCTGCTGACACGGTACAAGGGAAAGTTCCCGCATTATGATGTG
AATAATGAGATGATGCATGGTTCTTTCTATCAAGATAAATTGGGTAAAGACATCAGGGTA
AACATGTTTAAAACTGCACATCAACTGGACCCTTCCCCCATCCTGTTTGTAAATGATTAC
CATGTTGAGGATGGCTGTGACACCCGATCTTACCCTGAGAAATACATTGAGCACATTCTT
GATCTCCAAGAGCACGGTGCACCTGTTGGAGGTATAGGTATTCAGGGACATATTGACAGT
CCAGTTGGTCCCATTGTATGTTCTGCTCTGGACAAACTTGGTACTCTTGGACTTCCAATC
TGGTTCACTGAAGTTGACGTGTCTTCAGATAATGAATACGTTAGAGCTGATGATCTAGAA
GTTATGCTTCGAGAAGCTTATGCTCACCCTGCTGTAGAAGGTATAATGTTGTGGGGATTC
TGGGAGCTGTTCATGAGTCGATCAAATGCACATTTAGTGGATGCAGAAGGAGACATCAAT
GAAGCTGGAAAAAGGTACCTTGCGCTTAAGCATGAGTGGTCATCCCATCCGCATGGTCAT
ATTGATGAACAAGGGCAATTCAGCTTTAGTGGATTCCATGGCTCCTATGAAGTGGAAGTC
GTAACAGTTTCAAAGAAAATTACTAAGAAATTTTTGGTTGACAAGGGCGATAATGCACTG
GTGATCTCCGTTGATATATCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008830
PEP Infomation

pacid=37475797 transcript=PGSC0003DMT400012716 locus=PGSC0003DMG400004955 ID=PGSC0003DMT400012716.v4.03 annot-version=v4.03
Sequence

MKRLCAFSFARRLFKPRTTHSQESKEKMEQSPIVTVEDNFDLQESRERMEMSPMITANIN
FDSQSATENEKETGSYAATNIIQNHEFSDGLHSWHPNCCDAFVVPASSGYHKGLAAKEGC
CYAVVSNRKECWQGLEQDITSRVSAGSTYTVSACVGASGTFQGSVEVLATLKLVYQNSET
SYLFIAKKAASEECWEILEGLFSLSTMPDQVIFYLEGPPAGTDLLIKSVVISCPSSTACD
SSGTSSVCTDDDNIIINPQFDDGLNSWSGRGCKVALHDSMADGKITPMSGKSFASATERT
QSWNGIQQDVTGRVKRKLAYEVSAVVRIYGNNVTSADLRSTLYVKAADNRERYIGIASVQ
ATDKDWVKLQGKFLINDSPSQVVVFLEGPPAGTDILINNLVIKHAAKAPPSSPPVIEDAG
FGVNIITNTSLNDGTNGWFPLGNCTMSVQTGSPHIMPPMARDSLGAHEPLSGRYILVANR
TQNWMGPAQMITDKVKLYLTYQVSAWVKIGQTSGPQNVNVALGVDSQWVNGGQAEISDDR
WHEIGGSFRIEKPAAKVMVYIQGPAAGVDLMVAGLQIFPVDRRARFRHLKKQTAKLRKRD
VMLKFSGSDSGSLFGTFVRVRQLQNSFPFGSAISRTNMDNEDFNAFFVKNFNWAVFGNEL
KWYWTEAQQGNLNYKDADELLDFCTKNNIQVRGHCIFWEVVGTVQAWVQSLNKNDLMTAV
QNRLTGLLTRYKGKFPHYDVNNEMMHGSFYQDKLGKDIRVNMFKTAHQLDPSPILFVNDY
HVEDGCDTRSYPEKYIEHILDLQEHGAPVGGIGIQGHIDSPVGPIVCSALDKLGTLGLPI
WFTEVDVSSDNEYVRADDLEVMLREAYAHPAVEGIMLWGFWELFMSRSNAHLVDAEGDIN
EAGKRYLALKHEWSSHPHGHIDEQGQFSFSGFHGSYEVEVVTVSKKITKKFLVDKGDNAL
VISVDIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400012716
Transcript Infomation

pacid=37475797 locus=PGSC0003DMG400004955 ID=PGSC0003DMT400012716.v4.03 annot-version=v4.03
Sequence

ATGAAGAGGTTATGTGCTTTCAGCTTTGCTCGTCGACTCTTCAAACCTCGTACAACACAT
TCCCAGGAATCAAAGGAGAAAATGGAGCAGTCACCAATTGTCACTGTCGAGGACAACTTT
GATTTGCAGGAATCAAGGGAGAGGATGGAGATGTCACCAATGATCACTGCCAACATTAAC
TTTGATTCTCAGAGTGCAACGGAAAATGAGAAAGAGACTGGGAGTTATGCTGCTACTAAC
ATCATCCAAAACCATGAATTCTCGGATGGGCTGCACTCTTGGCATCCCAATTGTTGCGAT
GCTTTTGTGGTTCCAGCAAGTTCTGGATACCATAAAGGATTAGCGGCGAAGGAAGGCTGT
TGTTATGCTGTTGTCTCAAATCGTAAGGAATGTTGGCAAGGCTTAGAGCAAGACATTACA
AGCCGTGTATCAGCAGGTTCCACTTATACAGTTTCTGCTTGTGTTGGAGCCTCTGGTACT
TTTCAGGGTTCTGTTGAAGTCCTCGCCACGTTGAAACTAGTGTATCAAAATTCAGAAACA
AGCTATCTATTCATTGCAAAAAAAGCTGCTTCGGAGGAGTGTTGGGAGATATTAGAAGGT
TTGTTTTCTCTGTCAACCATGCCCGATCAAGTTATATTCTATCTCGAGGGACCTCCAGCT
GGAACTGACCTGCTCATAAAGTCAGTAGTGATATCATGTCCTAGTTCTACTGCTTGTGAT
AGTTCTGGCACATCATCTGTTTGTACCGATGATGATAACATCATAATAAACCCTCAATTT
GATGATGGTCTCAATAGTTGGTCTGGAAGAGGCTGCAAGGTGGCCTTGCATGACTCTATG
GCAGATGGGAAGATCACTCCAATGTCTGGAAAATCTTTTGCATCTGCAACGGAACGCACC
CAGAGCTGGAATGGAATTCAGCAAGATGTGACAGGAAGAGTGAAGCGAAAACTAGCTTAT
GAGGTATCTGCTGTTGTCCGGATCTACGGTAACAATGTCACTAGTGCAGATCTTCGCAGT
ACATTATATGTTAAAGCAGCTGACAACCGTGAACGGTACATAGGCATTGCCAGTGTCCAA
GCCACAGACAAAGACTGGGTGAAGTTGCAAGGGAAGTTTCTTATAAATGACTCCCCATCT
CAGGTTGTTGTCTTTTTAGAAGGTCCACCTGCAGGTACGGATATCCTCATTAACAATTTA
GTCATAAAGCATGCAGCTAAAGCTCCTCCTTCTTCTCCACCAGTTATTGAGGATGCTGGT
TTTGGTGTTAATATAATCACAAATACAAGTTTGAATGATGGCACAAATGGCTGGTTTCCA
CTTGGAAACTGTACAATGAGTGTTCAAACAGGCTCACCACATATTATGCCTCCAATGGCT
AGAGATTCCCTTGGTGCTCATGAGCCTTTAAGTGGCCGTTATATTCTTGTGGCTAATCGT
ACTCAAAACTGGATGGGTCCTGCTCAGATGATCACGGATAAAGTAAAACTCTATTTGACA
TATCAAGTATCTGCATGGGTTAAAATTGGACAAACATCAGGACCTCAGAATGTAAATGTT
GCCCTTGGAGTAGACAGCCAATGGGTAAATGGAGGCCAAGCTGAGATCAGCGATGATAGA
TGGCATGAAATTGGAGGATCTTTTAGAATTGAGAAGCCAGCTGCTAAGGTTATGGTTTAT
ATTCAGGGTCCTGCTGCTGGTGTAGACCTAATGGTTGCTGGGCTTCAAATTTTTCCCGTT
GACAGACGTGCACGGTTTAGACACTTGAAGAAACAAACTGCAAAGTTACGCAAGCGAGAC
GTCATGTTGAAGTTCTCTGGATCAGATTCAGGCAGTTTGTTTGGCACATTTGTTAGAGTT
AGACAACTGCAAAACAGCTTCCCCTTTGGATCAGCCATAAGCAGAACAAACATGGACAAT
GAAGACTTCAATGCCTTCTTTGTCAAGAATTTCAATTGGGCTGTGTTCGGAAATGAGCTG
AAATGGTACTGGACAGAAGCACAGCAAGGGAATTTGAACTACAAAGATGCTGATGAGCTC
CTGGACTTTTGCACAAAAAACAACATCCAAGTTCGAGGTCACTGTATCTTTTGGGAGGTG
GTGGGCACCGTTCAGGCATGGGTACAATCCTTGAACAAAAATGACTTGATGACGGCTGTT
CAAAACCGTTTAACAGGGCTGCTGACACGGTACAAGGGAAAGTTCCCGCATTATGATGTG
AATAATGAGATGATGCATGGTTCTTTCTATCAAGATAAATTGGGTAAAGACATCAGGGTA
AACATGTTTAAAACTGCACATCAACTGGACCCTTCCCCCATCCTGTTTGTAAATGATTAC
CATGTTGAGGATGGCTGTGACACCCGATCTTACCCTGAGAAATACATTGAGCACATTCTT
GATCTCCAAGAGCACGGTGCACCTGTTGGAGGTATAGGTATTCAGGGACATATTGACAGT
CCAGTTGGTCCCATTGTATGTTCTGCTCTGGACAAACTTGGTACTCTTGGACTTCCAATC
TGGTTCACTGAAGTTGACGTGTCTTCAGATAATGAATACGTTAGAGCTGATGATCTAGAA
GTTATGCTTCGAGAAGCTTATGCTCACCCTGCTGTAGAAGGTATAATGTTGTGGGGATTC
TGGGAGCTGTTCATGAGTCGATCAAATGCACATTTAGTGGATGCAGAAGGAGACATCAAT
GAAGCTGGAAAAAGGTACCTTGCGCTTAAGCATGAGTGGTCATCCCATCCGCATGGTCAT
ATTGATGAACAAGGGCAATTCAGCTTTAGTGGATTCCATGGCTCCTATGAAGTGGAAGTC
GTAACAGTTTCAAAGAAAATTACTAAGAAATTTTTGGTTGACAAGGGCGATAATGCACTG
GTGATCTCCGTTGATATATCCTGA