Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012703
CDS Infomation

pacid=37471947 polypeptide=PGSC0003DMP400008823 locus=PGSC0003DMG400004949 ID=PGSC0003DMT400012703.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCTCAATCTACTCTCTCACCCCTCTTCTCTGCACCACCAGCAACTTCTTTA
CAAATAGCTCCTACTACTAGTAGTGATGAGGAGTCTGCTTATATTGACTGGGACAATCTT
GGATTCCAATTGATGCAAACTGATTATATGTACGTGACAAAATGCTCTGATGATGGAATA
TTTAGACAAGGACAACTTAATCGTTATGGCAATATCCAATTGAGCCCATCTGCTGGTGTC
TTGAACTATGGACAGGGATTGTTTGAAGGTACAAAAGCGTATAGAAGAGAGGATGGACGA
GTATTTCTATTTCGTCCTGAACAGAACGCGATAAGAATGCAAATTGGTGCGGAGAGAATG
TGCATGCCATCTCCTTCGACTGATCAATTTGTTGAGGCTGTTAAGCAAACGGCTCTCGCT
AACAAGCGTTGGATTCCACCTTTTGGAAAAGGGGCACTATACATTAGGCCTCTTTTAATA
GGCAGTGGTCCAATTTTGGGTTTTGCTCCAGCACCTGAGTACACTTTTCTTGTCTATGCC
TGCCCTGTGGGGAATTATTTCAAGCAAGGGACAGCGCCACTGAACTTATACGTTGAAGAG
GACGTGCATCGTGCCTCACGTGGTGGAGCTGGCGGAGTCAAAAGCATTACTAACTATGCT
CCGGTTTTAAAAGCTATGAAGAATGCAAAAGCAAATGGATATTCAGATGTACTATATGTT
GATGCAGTAAATAAGAAATATATTGAAGAAGTGTCTTCTTGCAATATTTTCCTTGTAAAA
GGAAATGTACTCTCAACTCCAATAGCCAAAGGAACTATTCTTGAAGGAATAACAAGAAAA
AGCATCATAGACATTGCACTTGATCTTGGATATACGGTTGAGGAACGTTTAATTGAAGTT
GATGAATTGTTTAGTGCTGATGAAGTTTTCTGTACGGGAACTGCAGTTGGTGTTGCTCCT
GTTGGAAGTATCACATATAAAGGCCAAAGGATTGAATATAAAATAAGCTCAGATCAGTTG
TGCAAGCAATTTTATTCAAGATTAGTAGGGATACAAAGAGGTGTTATCAAGGATGAAAGG
AATTGGATCGTGGAGATTGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400008823
PEP Infomation

pacid=37471947 transcript=PGSC0003DMT400012703 locus=PGSC0003DMG400004949 ID=PGSC0003DMT400012703.v4.03 annot-version=v4.03
Sequence

MASSQSTLSPLFSAPPATSLQIAPTTSSDEESAYIDWDNLGFQLMQTDYMYVTKCSDDGI
FRQGQLNRYGNIQLSPSAGVLNYGQGLFEGTKAYRREDGRVFLFRPEQNAIRMQIGAERM
CMPSPSTDQFVEAVKQTALANKRWIPPFGKGALYIRPLLIGSGPILGFAPAPEYTFLVYA
CPVGNYFKQGTAPLNLYVEEDVHRASRGGAGGVKSITNYAPVLKAMKNAKANGYSDVLYV
DAVNKKYIEEVSSCNIFLVKGNVLSTPIAKGTILEGITRKSIIDIALDLGYTVEERLIEV
DELFSADEVFCTGTAVGVAPVGSITYKGQRIEYKISSDQLCKQFYSRLVGIQRGVIKDER
NWIVEIE*

Transcript Sequence

Transcript ID

PGSC0003DMT400012703
Transcript Infomation

pacid=37471947 locus=PGSC0003DMG400004949 ID=PGSC0003DMT400012703.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCTCAATCTACTCTCTCACCCCTCTTCTCTGCACCACCAGCAACTTCTTTA
CAAATAGCTCCTACTACTAGTAGTGATGAGGAGTCTGCTTATATTGACTGGGACAATCTT
GGATTCCAATTGATGCAAACTGATTATATGTACGTGACAAAATGCTCTGATGATGGAATA
TTTAGACAAGGACAACTTAATCGTTATGGCAATATCCAATTGAGCCCATCTGCTGGTGTC
TTGAACTATGGACAGGGATTGTTTGAAGGTACAAAAGCGTATAGAAGAGAGGATGGACGA
GTATTTCTATTTCGTCCTGAACAGAACGCGATAAGAATGCAAATTGGTGCGGAGAGAATG
TGCATGCCATCTCCTTCGACTGATCAATTTGTTGAGGCTGTTAAGCAAACGGCTCTCGCT
AACAAGCGTTGGATTCCACCTTTTGGAAAAGGGGCACTATACATTAGGCCTCTTTTAATA
GGCAGTGGTCCAATTTTGGGTTTTGCTCCAGCACCTGAGTACACTTTTCTTGTCTATGCC
TGCCCTGTGGGGAATTATTTCAAGCAAGGGACAGCGCCACTGAACTTATACGTTGAAGAG
GACGTGCATCGTGCCTCACGTGGTGGAGCTGGCGGAGTCAAAAGCATTACTAACTATGCT
CCGGTTTTAAAAGCTATGAAGAATGCAAAAGCAAATGGATATTCAGATGTACTATATGTT
GATGCAGTAAATAAGAAATATATTGAAGAAGTGTCTTCTTGCAATATTTTCCTTGTAAAA
GGAAATGTACTCTCAACTCCAATAGCCAAAGGAACTATTCTTGAAGGAATAACAAGAAAA
AGCATCATAGACATTGCACTTGATCTTGGATATACGGTTGAGGAACGTTTAATTGAAGTT
GATGAATTGTTTAGTGCTGATGAAGTTTTCTGTACGGGAACTGCAGTTGGTGTTGCTCCT
GTTGGAAGTATCACATATAAAGGCCAAAGGATTGAATATAAAATAAGCTCAGATCAGTTG
TGCAAGCAATTTTATTCAAGATTAGTAGGGATACAAAGAGGTGTTATCAAGGATGAAAGG
AATTGGATCGTGGAGATTGAATGA