Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012679
CDS Infomation

pacid=37474762 polypeptide=PGSC0003DMP400008805 locus=PGSC0003DMG402004946 ID=PGSC0003DMT400012679.v4.03 annot-version=v4.03
Sequence

ATGGAAAGTTTTGTGCTTATATTGCAGATATTGTTATGTGGTTTTGTATGCTCAATTTCT
AGTGCGAAAGATATCATCACTGCAACTGACTTTCTAACAGATGGAAAGACCATTACTTCA
TCTGATGGAAGTTTTGAGATGGGATTTTTTTCCCCGGCTAGTTTCACGAATAATTGGTAT
GTTGGAATATGGTATAAGCACGATGTACCTGATAAGTCTGTGGTATGGGTTGCCAATAGA
GAAAATCCATTCAACAACACATCAGGTGTTATGTTGAAAATCATCGATACAGGACAACTT
GCTCTTCTCACTCCTGCTAATACAATCATGTGGTCTACTAATTCATCGAGGCCTTTGGCT
GTGAAGAATACAGTTGCACAGTTGTTGAACTCGGGGAATCTTGTCATAAGAGATGCAAAT
GATACCAAGCCTGAGAAGTTCCTGTGGCAGAGTTTTGATTATCCTACTGATACACTCTTA
CCAGGCATGAAGATGGGTAAGAACTTTGTAACTGGACAAGAATTTTACCTGTCCTCATGG
AAAAACGAATATGATCCAGCTCCAGGGGAATATACGTATCATTGTGATCCGACTGGATAT
CCTCAGGATGTCATGAGGAAAGGTAAAGTTAAGGTGTACAGTACTGGACCATGGAATGGA
CTCCGCTGGAGTGGTGTACCAGGACTGACAAAAAATACTATTTATACATTTAAACTGGAT
CTTGATGAAAAGAGAGCATTTTACAGCTTCGCGCTTTTAGGTTCTGTTATGACCAAATTA
ACCATGAACAATAACGGCGTGCTTCAGCGTTCAATGTGGGCTGAGAATAGACAGGAATGG
CATGTTTACATTTCTTCACCGGAAGATACTTGTGACAATTATGGAACATGTGGTTCATAT
GGTAGTTGCAACAACATACTCACTCCTGTGTGTAATTGCTTAGACAAGTTTGTGCCTAAA
GATCCAAGAAATTGGGCAATGACAAATTGGTCCGGCGGGTGTATTAGAAGGAAACCGCTT
AATTGCCAGAATGGAGATGGATTTCTCAAGTACTCTGGTATAAAGCTACCAGATACACAG
TATTCATGGTTTGATAGGAGTATGACACTCCACGAGTGCAAGCACGCTTGCTTGAGGAAT
TGCTCGTGTTTGGCTTACTCAAATCTTGATATACGCAATGGTGGGAGTGGCTGTTTGCTT
TGGTGTGGCGACTTAATTGACATTCGAGAATTACCTGGAGGACAGGACATTTACATAAGG
GTTGCTACCTCAGAGTTAGGCTCGAAGAAAACAAAACTACTCGTGTTGAGTCTGTTACTG
TTGATTGGAGTGACTGTGACTGGCCTGACCATTGGGCTGTATATTTGGAAAAAGAAGAAG
AAGAGGAAGATGAATTTGAAAGATGACCTAGACCTCCCACTGTTTACCTTATCAACTCTA
ACTAAAGCATCCTCTAATTTCTCAGTCGAGAACAAGATTGGAGAAGGTGGATTTGGATCT
GTTTATAAGGGAATCCTGGAAGGTGGACACGAAGTAGCTATAAAGAGGCTATCCAAGTCT
TCCTCGCAAGGAGTTAACGAGTTCAAGAATGAAGTTATTTGCATTGCCAAACTTCAGCAT
CGAAATCTTGTGAAGCTTATAGGTTGCTGCATTGCAGGAGGAGAAAAAATGTTGGTCTAT
GAATATATGTGCAACAGAAGTCTAGATCTCTTCATATTTGATGAAAAGAGGAGCTTGTTA
CTCAACTGGCCTAAGCGCTTCGGCATCATCAATGGAATTGCTAGAGGACTTCTGTATCTC
CATCAAGATTCTCGGCTAAGAATTATCCACAGAGACCTCAAAGCTAGTAACATTTTGCTA
GATGCTGACATGAACCCCAAGATCTCAGATTTTGGCATAGCTAGAAGCGTTGTAGGGAAT
GAGACTGGTGCTAATACACACCATGTGGTTGGGACACATGGTTACATGTCCCCGGAGTAT
GTAGTCCATGGTGTTTTCTCAGTAAAATCAGATGTATTTAGCTTTGGCGTATTAGTGCTA
GAGATAATCAGTGGTCGAAGAAACAGAGGATTTGCCCGTGAAAGTCACAGTATCAACCTA
CTCGGACATGTATGGAAACTTTATAAAGAAGGTAGACCATTAGAGCTAATTGATGGCCAT
CTAATGGATTCGCGTTATATTTCTGAATTGCTACGCTTAATCCATGTCGCTCTGTTATGT
GTACAACAATGTCCAGAAGACAGGCCAGATATGCCTACAGTGATCTTGATGTTGACTAAT
GATGCTATTTTGCCTCAAGCTAAGGAACCTGGTTTCTTCACAGAAAGCAAAGTCACGTCT
GAATGTTCTATAAGCATGTGTTCAACAAACGAAATTACCGTCACACAGTTAGAACCCCGG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400008805
PEP Infomation

pacid=37474762 transcript=PGSC0003DMT400012679 locus=PGSC0003DMG402004946 ID=PGSC0003DMT400012679.v4.03 annot-version=v4.03
Sequence

MESFVLILQILLCGFVCSISSAKDIITATDFLTDGKTITSSDGSFEMGFFSPASFTNNWY
VGIWYKHDVPDKSVVWVANRENPFNNTSGVMLKIIDTGQLALLTPANTIMWSTNSSRPLA
VKNTVAQLLNSGNLVIRDANDTKPEKFLWQSFDYPTDTLLPGMKMGKNFVTGQEFYLSSW
KNEYDPAPGEYTYHCDPTGYPQDVMRKGKVKVYSTGPWNGLRWSGVPGLTKNTIYTFKLD
LDEKRAFYSFALLGSVMTKLTMNNNGVLQRSMWAENRQEWHVYISSPEDTCDNYGTCGSY
GSCNNILTPVCNCLDKFVPKDPRNWAMTNWSGGCIRRKPLNCQNGDGFLKYSGIKLPDTQ
YSWFDRSMTLHECKHACLRNCSCLAYSNLDIRNGGSGCLLWCGDLIDIRELPGGQDIYIR
VATSELGSKKTKLLVLSLLLLIGVTVTGLTIGLYIWKKKKKRKMNLKDDLDLPLFTLSTL
TKASSNFSVENKIGEGGFGSVYKGILEGGHEVAIKRLSKSSSQGVNEFKNEVICIAKLQH
RNLVKLIGCCIAGGEKMLVYEYMCNRSLDLFIFDEKRSLLLNWPKRFGIINGIARGLLYL
HQDSRLRIIHRDLKASNILLDADMNPKISDFGIARSVVGNETGANTHHVVGTHGYMSPEY
VVHGVFSVKSDVFSFGVLVLEIISGRRNRGFARESHSINLLGHVWKLYKEGRPLELIDGH
LMDSRYISELLRLIHVALLCVQQCPEDRPDMPTVILMLTNDAILPQAKEPGFFTESKVTS
ECSISMCSTNEITVTQLEPR*

Transcript Sequence

Transcript ID

PGSC0003DMT400012679
Transcript Infomation

pacid=37474762 locus=PGSC0003DMG402004946 ID=PGSC0003DMT400012679.v4.03 annot-version=v4.03
Sequence

ATGGAAAGTTTTGTGCTTATATTGCAGATATTGTTATGTGGTTTTGTATGCTCAATTTCT
AGTGCGAAAGATATCATCACTGCAACTGACTTTCTAACAGATGGAAAGACCATTACTTCA
TCTGATGGAAGTTTTGAGATGGGATTTTTTTCCCCGGCTAGTTTCACGAATAATTGGTAT
GTTGGAATATGGTATAAGCACGATGTACCTGATAAGTCTGTGGTATGGGTTGCCAATAGA
GAAAATCCATTCAACAACACATCAGGTGTTATGTTGAAAATCATCGATACAGGACAACTT
GCTCTTCTCACTCCTGCTAATACAATCATGTGGTCTACTAATTCATCGAGGCCTTTGGCT
GTGAAGAATACAGTTGCACAGTTGTTGAACTCGGGGAATCTTGTCATAAGAGATGCAAAT
GATACCAAGCCTGAGAAGTTCCTGTGGCAGAGTTTTGATTATCCTACTGATACACTCTTA
CCAGGCATGAAGATGGGTAAGAACTTTGTAACTGGACAAGAATTTTACCTGTCCTCATGG
AAAAACGAATATGATCCAGCTCCAGGGGAATATACGTATCATTGTGATCCGACTGGATAT
CCTCAGGATGTCATGAGGAAAGGTAAAGTTAAGGTGTACAGTACTGGACCATGGAATGGA
CTCCGCTGGAGTGGTGTACCAGGACTGACAAAAAATACTATTTATACATTTAAACTGGAT
CTTGATGAAAAGAGAGCATTTTACAGCTTCGCGCTTTTAGGTTCTGTTATGACCAAATTA
ACCATGAACAATAACGGCGTGCTTCAGCGTTCAATGTGGGCTGAGAATAGACAGGAATGG
CATGTTTACATTTCTTCACCGGAAGATACTTGTGACAATTATGGAACATGTGGTTCATAT
GGTAGTTGCAACAACATACTCACTCCTGTGTGTAATTGCTTAGACAAGTTTGTGCCTAAA
GATCCAAGAAATTGGGCAATGACAAATTGGTCCGGCGGGTGTATTAGAAGGAAACCGCTT
AATTGCCAGAATGGAGATGGATTTCTCAAGTACTCTGGTATAAAGCTACCAGATACACAG
TATTCATGGTTTGATAGGAGTATGACACTCCACGAGTGCAAGCACGCTTGCTTGAGGAAT
TGCTCGTGTTTGGCTTACTCAAATCTTGATATACGCAATGGTGGGAGTGGCTGTTTGCTT
TGGTGTGGCGACTTAATTGACATTCGAGAATTACCTGGAGGACAGGACATTTACATAAGG
GTTGCTACCTCAGAGTTAGGCTCGAAGAAAACAAAACTACTCGTGTTGAGTCTGTTACTG
TTGATTGGAGTGACTGTGACTGGCCTGACCATTGGGCTGTATATTTGGAAAAAGAAGAAG
AAGAGGAAGATGAATTTGAAAGATGACCTAGACCTCCCACTGTTTACCTTATCAACTCTA
ACTAAAGCATCCTCTAATTTCTCAGTCGAGAACAAGATTGGAGAAGGTGGATTTGGATCT
GTTTATAAGGGAATCCTGGAAGGTGGACACGAAGTAGCTATAAAGAGGCTATCCAAGTCT
TCCTCGCAAGGAGTTAACGAGTTCAAGAATGAAGTTATTTGCATTGCCAAACTTCAGCAT
CGAAATCTTGTGAAGCTTATAGGTTGCTGCATTGCAGGAGGAGAAAAAATGTTGGTCTAT
GAATATATGTGCAACAGAAGTCTAGATCTCTTCATATTTGATGAAAAGAGGAGCTTGTTA
CTCAACTGGCCTAAGCGCTTCGGCATCATCAATGGAATTGCTAGAGGACTTCTGTATCTC
CATCAAGATTCTCGGCTAAGAATTATCCACAGAGACCTCAAAGCTAGTAACATTTTGCTA
GATGCTGACATGAACCCCAAGATCTCAGATTTTGGCATAGCTAGAAGCGTTGTAGGGAAT
GAGACTGGTGCTAATACACACCATGTGGTTGGGACACATGGTTACATGTCCCCGGAGTAT
GTAGTCCATGGTGTTTTCTCAGTAAAATCAGATGTATTTAGCTTTGGCGTATTAGTGCTA
GAGATAATCAGTGGTCGAAGAAACAGAGGATTTGCCCGTGAAAGTCACAGTATCAACCTA
CTCGGACATGTATGGAAACTTTATAAAGAAGGTAGACCATTAGAGCTAATTGATGGCCAT
CTAATGGATTCGCGTTATATTTCTGAATTGCTACGCTTAATCCATGTCGCTCTGTTATGT
GTACAACAATGTCCAGAAGACAGGCCAGATATGCCTACAGTGATCTTGATGTTGACTAAT
GATGCTATTTTGCCTCAAGCTAAGGAACCTGGTTTCTTCACAGAAAGCAAAGTCACGTCT
GAATGTTCTATAAGCATGTGTTCAACAAACGAAATTACCGTCACACAGTTAGAACCCCGG
TAA