Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012666
CDS Infomation

pacid=37473452 polypeptide=PGSC0003DMP400008794 locus=PGSC0003DMG400004942 ID=PGSC0003DMT400012666.v4.03 annot-version=v4.03
Sequence

ATGGATTTTGGGGGTTTGGATAGTGGTGGCGGTGGGGTGATTTGTTCAGACAATACTAGT
AGTACTATGTTTGTTGCCTCAGCTGAGACAAAGCAGAAATGGTATGGATCTGGTGGATTT
AATAAACATGAAAGGTCCTCTGTTACTGAAGATGAATGGAATAAGGAGAGTAAATTAGCA
AAGACAAGTGATGATTTTTCATCTTCCAAAGCTACTATGATGTTTCAGCAACTTCCAATT
TCTCATGAGAATCAGCAAATGCTTAGCTTTTCTACACCCAACTCTCAAAATCATGTCACA
ATGCCTTATTATAATCAACACCCTTCAAGTGCTTTTGCTAGAAACACTTCAGGCTATGGC
AGTGGAGCTTTGAGTGCTGGAAATATGCATGGGTTAATAGCAGGGGTGAAAGGGCCATTC
ACTCCATCACAATGGATGGAGCTGGAACATCAGGCCTTGATCTACAAGTACATCACTGCA
AATGTTCCAATACCCCCTTATCTCCTCAATCCTATAAGAAAAGCTCTTGAATCTGCTGGT
TTCACAACTTTTGCAGGCCTTAGACCCAATGCTTTGGGATGGGGTGCTTTCCATCTAGGA
TTCTCCAATAGCAATGATCCAGAACCAGGAAGGTGTAGGAGAACAGATGGTAAAAAATGG
AGGTGCTCAAGAGATGCAGTTGCTGATCAAAAGTATTGTGAGCGACACATGAACAGGGGC
CGCCATCGTTCAAGAAAGCCTGTGGAAGGACAAACTGGCAATTCTGCCTCTGGAAACAAC
ACCGGTGCTACTACTACTTCCGCCAAGCTGACAAACATGTCATCTGCAGCATCAGCAGCT
TTGGCTTCCGGAGGGGGCGCTGCTGCATCCAACACTCTCAATCTCTCTCATCACAATCAA
CTCTCCAACTTGCAGCCTGCTGGAACTAATCTGTCCACAACATCCCCTTATCTTGAGAGG
AGTTATACAGCCAAGGAAAATTTTGGTGAAAGGTATTCGGATACAAAAGGCTCTTCAGTT
GTTTCACCAAGTGTTAAAGAGCCCCAATATTCAAACCAGAAGGCGCAGAATCCCTATGGA
TTAACCTCCAGGGCCGAATTCGGATTAGTTTGTGCAGACTCTTTGATCAATCCCTTGAAT
AAAAACTCTTCGCTAGTTAACTGCCGTGGCTATGTCAATTCAGATGTCAGAGATCAAGAA
AGGAAATTACAGCATCATCCACTTCGGCAGTTCATGGACGAGTTGCCCAAAACCCAATCT
GATCAATCCAATGTTTCATGGCCAGACATTGATTTGCAGTCAGATCCAACTCAGCTCTCC
ATTTCTATCCCTTTAGTCACATCAGACTTCATGTCTTCGACTTCCTCTCCTGCGAATGAC
AAGCTCACAGCCTCACCACATAGGTCTCGGGAGCATGAAGCAATTCAAATGGGACTAGGC
ATTGGTACCATCATCAGTGAACATAACCAAAGACAAGGAAGTTGGATTCCTATATCATGG
GAATCTTCCTTGGGTGGACCTCTTGGAGAGGTCTTGCATAGCACTAATAGCAGCTCAGGC
GATTGCAAGAACAAGTCAGCTCTTAATCTCATGACCGAAGGATGGGATAGAAGCCCTCGG
ATGGGATCATCACCAACCGGAGTCTTACAAAAGTCCTCCTTCGGTTCCCTTTCCAACAGC
AGTGCAGGGAGCAGTCCTAGAGCAGAACACAGTAAGACAACGAACGAAGGCTCCAGTCTT
TGTAATGGCCTTCTTGGAACAACTCTTATGAATCCAACCCTACCTGCCATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008794
PEP Infomation

pacid=37473452 transcript=PGSC0003DMT400012666 locus=PGSC0003DMG400004942 ID=PGSC0003DMT400012666.v4.03 annot-version=v4.03
Sequence

MDFGGLDSGGGGVICSDNTSSTMFVASAETKQKWYGSGGFNKHERSSVTEDEWNKESKLA
KTSDDFSSSKATMMFQQLPISHENQQMLSFSTPNSQNHVTMPYYNQHPSSAFARNTSGYG
SGALSAGNMHGLIAGVKGPFTPSQWMELEHQALIYKYITANVPIPPYLLNPIRKALESAG
FTTFAGLRPNALGWGAFHLGFSNSNDPEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRG
RHRSRKPVEGQTGNSASGNNTGATTTSAKLTNMSSAASAALASGGGAAASNTLNLSHHNQ
LSNLQPAGTNLSTTSPYLERSYTAKENFGERYSDTKGSSVVSPSVKEPQYSNQKAQNPYG
LTSRAEFGLVCADSLINPLNKNSSLVNCRGYVNSDVRDQERKLQHHPLRQFMDELPKTQS
DQSNVSWPDIDLQSDPTQLSISIPLVTSDFMSSTSSPANDKLTASPHRSREHEAIQMGLG
IGTIISEHNQRQGSWIPISWESSLGGPLGEVLHSTNSSSGDCKNKSALNLMTEGWDRSPR
MGSSPTGVLQKSSFGSLSNSSAGSSPRAEHSKTTNEGSSLCNGLLGTTLMNPTLPAM*

Transcript Sequence

Transcript ID

PGSC0003DMT400012666
Transcript Infomation

pacid=37473452 locus=PGSC0003DMG400004942 ID=PGSC0003DMT400012666.v4.03 annot-version=v4.03
Sequence

ATGGATTTTGGGGGTTTGGATAGTGGTGGCGGTGGGGTGATTTGTTCAGACAATACTAGT
AGTACTATGTTTGTTGCCTCAGCTGAGACAAAGCAGAAATGGTATGGATCTGGTGGATTT
AATAAACATGAAAGGTCCTCTGTTACTGAAGATGAATGGAATAAGGAGAGTAAATTAGCA
AAGACAAGTGATGATTTTTCATCTTCCAAAGCTACTATGATGTTTCAGCAACTTCCAATT
TCTCATGAGAATCAGCAAATGCTTAGCTTTTCTACACCCAACTCTCAAAATCATGTCACA
ATGCCTTATTATAATCAACACCCTTCAAGTGCTTTTGCTAGAAACACTTCAGGCTATGGC
AGTGGAGCTTTGAGTGCTGGAAATATGCATGGGTTAATAGCAGGGGTGAAAGGGCCATTC
ACTCCATCACAATGGATGGAGCTGGAACATCAGGCCTTGATCTACAAGTACATCACTGCA
AATGTTCCAATACCCCCTTATCTCCTCAATCCTATAAGAAAAGCTCTTGAATCTGCTGGT
TTCACAACTTTTGCAGGCCTTAGACCCAATGCTTTGGGATGGGGTGCTTTCCATCTAGGA
TTCTCCAATAGCAATGATCCAGAACCAGGAAGGTGTAGGAGAACAGATGGTAAAAAATGG
AGGTGCTCAAGAGATGCAGTTGCTGATCAAAAGTATTGTGAGCGACACATGAACAGGGGC
CGCCATCGTTCAAGAAAGCCTGTGGAAGGACAAACTGGCAATTCTGCCTCTGGAAACAAC
ACCGGTGCTACTACTACTTCCGCCAAGCTGACAAACATGTCATCTGCAGCATCAGCAGCT
TTGGCTTCCGGAGGGGGCGCTGCTGCATCCAACACTCTCAATCTCTCTCATCACAATCAA
CTCTCCAACTTGCAGCCTGCTGGAACTAATCTGTCCACAACATCCCCTTATCTTGAGAGG
AGTTATACAGCCAAGGAAAATTTTGGTGAAAGGTATTCGGATACAAAAGGCTCTTCAGTT
GTTTCACCAAGTGTTAAAGAGCCCCAATATTCAAACCAGAAGGCGCAGAATCCCTATGGA
TTAACCTCCAGGGCCGAATTCGGATTAGTTTGTGCAGACTCTTTGATCAATCCCTTGAAT
AAAAACTCTTCGCTAGTTAACTGCCGTGGCTATGTCAATTCAGATGTCAGAGATCAAGAA
AGGAAATTACAGCATCATCCACTTCGGCAGTTCATGGACGAGTTGCCCAAAACCCAATCT
GATCAATCCAATGTTTCATGGCCAGACATTGATTTGCAGTCAGATCCAACTCAGCTCTCC
ATTTCTATCCCTTTAGTCACATCAGACTTCATGTCTTCGACTTCCTCTCCTGCGAATGAC
AAGCTCACAGCCTCACCACATAGGTCTCGGGAGCATGAAGCAATTCAAATGGGACTAGGC
ATTGGTACCATCATCAGTGAACATAACCAAAGACAAGGAAGTTGGATTCCTATATCATGG
GAATCTTCCTTGGGTGGACCTCTTGGAGAGGTCTTGCATAGCACTAATAGCAGCTCAGGC
GATTGCAAGAACAAGTCAGCTCTTAATCTCATGACCGAAGGATGGGATAGAAGCCCTCGG
ATGGGATCATCACCAACCGGAGTCTTACAAAAGTCCTCCTTCGGTTCCCTTTCCAACAGC
AGTGCAGGGAGCAGTCCTAGAGCAGAACACAGTAAGACAACGAACGAAGGCTCCAGTCTT
TGTAATGGCCTTCTTGGAACAACTCTTATGAATCCAACCCTACCTGCCATGTAA