Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012623
CDS Infomation

pacid=37475150 polypeptide=PGSC0003DMP400008775 locus=PGSC0003DMG400004937 ID=PGSC0003DMT400012623.v4.03 annot-version=v4.03
Sequence

ATGTCAATGAAGTTGACACCTTCCAAGAGACCACATGATCAGAGCCTTGCAGAAACAAAT
GGCCGAGGGAAGTGGCAGAAATCATCATCTTTTAGTTCCCAGAGATCACCTGCGAAAATT
CGTATATTATGCCCTGCTTCAAAAATAGATTTCCTTATCGGAGAGGATAGTAGCATTATT
TCTCGGATACAAGAGGAAACTGGTGCAGAGGTTCGAGTTGAGGATAGTATTGTTGGTTGT
GATGAGAGGGTGATAGTTATTATAGGTTCAGGAAAAGAAGATGAAGTGGGAACCAAACAG
TTCCAGGCTGATGTTGAGGGGAGTGAAACTAATGAAAAAGACAGTTGCAATGATGAAAAT
GGTGATAAGGGTGAGAATAAGGCGTCTCTTCCGGCAGAAAATTCCAAAACTGAAAAGGAA
ACTGAATCTATTCAGAAAGCTCTATTCTTGTTGTTTGAAAGGATGGTTGAAGGAGGAGCA
GAAATGGATGGAGGAGATGAAGAGGGCAATAATTCTTCCTCATTAATTATAAGATTGCTT
GTTCTCTCCAGCCAAGTGGGCTGTTTGCTAGGAAAAGGTGGTAGTGTCATAAAGCAGATG
TCTTCTGAAAGTGGTTCACAGATACGAATTCTTCCCAGGGACAAACTACCTTCATGTGCG
TCTTCATCAGATGAATTGGTTCAGATTTCTGGGGAGCATGATGCAGTTAAAAAAGCTCTT
GAAATTGTTGCTCGACAATTACTTGGGAGTTCCTCTGGGGATCAAGATTTTCTCTCTGCT
GATGCTGGTGGTCCATCTTCTCAGTCTCCTAGACGTCCTCTATCTAACCGGGAAATACGT
CCACCATCAACACGTCCTTACCATGGGCAGGGGCCTGCTTCCTCTGGTGGATTTCGTGTT
GGGGAAGCTGGTATACCTGGTCGAATGAATCCTATTCCTGATGCCTTGACTTTCAGATTA
CTTTGTCCAGATGAAAAGGTTGGAGGTATAATTGGAAAGGGAGGAAGTATAATTAAAGCA
CTTCAGCATGAGACTGGGTGTCAAATCAAAGTTCTGGAAGCCACAGGGGATTCTGAAGAT
CGAATTATTGTCATCTCTGGTCCAGCGTTCCCAGATGATAGAATATCTTTGCCGCAAGAT
GCTGTCCTTCGCATCCAATCCCGAATTTTTAGGGCTGCACCTGAGAATCAGGACAATGTT
ATGGTTGCAAAACTCTTGGTGTTCTCCAATCAAATTGGGTGTCTCTTGGGTAAAGGTGGT
GGTATAATAGCTGAAATGAGGAAATCAACTGGAGCGTATATTCGTATTGTAGGCAAGGAT
CAAATCCCAAAGTGTGCTGCGGAAAATGAAGAAGTAATTCAGATAAATGGAGATGTTGAA
AAAGTTCATGAAGCCCTTCTGCAGATAACTGCCAGATTACAGAATCATTACTTTCGTGAT
GCATTTCCTTCAAACCCTGGGTTTCTGGACCAAGTACCTCCATTCCCTTCACACATGGGA
AGGAGAGAATTTTCACCACCTCCAGGCATGTTCCCCAACATTCGTCCACCATTTCACAAG
TTTGATGCTCTACCTCCACATGGTGGTTTCCATCCACATGATGATCGTCCTCCCTTTATG
CAAAATTTCCATAGGCCAGGCATTCCACCTCATATTTCTGATAGAATGCCATCTTCAGCA
CCATGGGGTTCTCAGGGACGGGGTGAAGGTGGGGGACATCTAGGCTTCCCAGACTATGCA
GGAGGTCCTCGAAATATTGGCGGCTTTGGAGGAGGAAGTAATCCCGCTGTGATCACAAGC
ACTACCGTGGAAGTTGTTGTACCTCGATCTGTCATTCCTGCAATCTATGGAGAAGGTGGG
GGATGTCTTCGACAAATATGTGAGATTTCTGATGCGAAAGTCACCATAAATGATCCCAAG
CCTGGAGCAACAGAGACTGTGATCATTATATCTGGTACGCCTGAGCAGACGAATGCTGCT
CAGAGTCTCATTCAAGCATTTGTCATGGTCGAGACTGAAGGTGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008775
PEP Infomation

pacid=37475150 transcript=PGSC0003DMT400012623 locus=PGSC0003DMG400004937 ID=PGSC0003DMT400012623.v4.03 annot-version=v4.03
Sequence

MSMKLTPSKRPHDQSLAETNGRGKWQKSSSFSSQRSPAKIRILCPASKIDFLIGEDSSII
SRIQEETGAEVRVEDSIVGCDERVIVIIGSGKEDEVGTKQFQADVEGSETNEKDSCNDEN
GDKGENKASLPAENSKTEKETESIQKALFLLFERMVEGGAEMDGGDEEGNNSSSLIIRLL
VLSSQVGCLLGKGGSVIKQMSSESGSQIRILPRDKLPSCASSSDELVQISGEHDAVKKAL
EIVARQLLGSSSGDQDFLSADAGGPSSQSPRRPLSNREIRPPSTRPYHGQGPASSGGFRV
GEAGIPGRMNPIPDALTFRLLCPDEKVGGIIGKGGSIIKALQHETGCQIKVLEATGDSED
RIIVISGPAFPDDRISLPQDAVLRIQSRIFRAAPENQDNVMVAKLLVFSNQIGCLLGKGG
GIIAEMRKSTGAYIRIVGKDQIPKCAAENEEVIQINGDVEKVHEALLQITARLQNHYFRD
AFPSNPGFLDQVPPFPSHMGRREFSPPPGMFPNIRPPFHKFDALPPHGGFHPHDDRPPFM
QNFHRPGIPPHISDRMPSSAPWGSQGRGEGGGHLGFPDYAGGPRNIGGFGGGSNPAVITS
TTVEVVVPRSVIPAIYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAA
QSLIQAFVMVETEGA*

Transcript Sequence

Transcript ID

PGSC0003DMT400012623
Transcript Infomation

pacid=37475150 locus=PGSC0003DMG400004937 ID=PGSC0003DMT400012623.v4.03 annot-version=v4.03
Sequence

ATGTCAATGAAGTTGACACCTTCCAAGAGACCACATGATCAGAGCCTTGCAGAAACAAAT
GGCCGAGGGAAGTGGCAGAAATCATCATCTTTTAGTTCCCAGAGATCACCTGCGAAAATT
CGTATATTATGCCCTGCTTCAAAAATAGATTTCCTTATCGGAGAGGATAGTAGCATTATT
TCTCGGATACAAGAGGAAACTGGTGCAGAGGTTCGAGTTGAGGATAGTATTGTTGGTTGT
GATGAGAGGGTGATAGTTATTATAGGTTCAGGAAAAGAAGATGAAGTGGGAACCAAACAG
TTCCAGGCTGATGTTGAGGGGAGTGAAACTAATGAAAAAGACAGTTGCAATGATGAAAAT
GGTGATAAGGGTGAGAATAAGGCGTCTCTTCCGGCAGAAAATTCCAAAACTGAAAAGGAA
ACTGAATCTATTCAGAAAGCTCTATTCTTGTTGTTTGAAAGGATGGTTGAAGGAGGAGCA
GAAATGGATGGAGGAGATGAAGAGGGCAATAATTCTTCCTCATTAATTATAAGATTGCTT
GTTCTCTCCAGCCAAGTGGGCTGTTTGCTAGGAAAAGGTGGTAGTGTCATAAAGCAGATG
TCTTCTGAAAGTGGTTCACAGATACGAATTCTTCCCAGGGACAAACTACCTTCATGTGCG
TCTTCATCAGATGAATTGGTTCAGATTTCTGGGGAGCATGATGCAGTTAAAAAAGCTCTT
GAAATTGTTGCTCGACAATTACTTGGGAGTTCCTCTGGGGATCAAGATTTTCTCTCTGCT
GATGCTGGTGGTCCATCTTCTCAGTCTCCTAGACGTCCTCTATCTAACCGGGAAATACGT
CCACCATCAACACGTCCTTACCATGGGCAGGGGCCTGCTTCCTCTGGTGGATTTCGTGTT
GGGGAAGCTGGTATACCTGGTCGAATGAATCCTATTCCTGATGCCTTGACTTTCAGATTA
CTTTGTCCAGATGAAAAGGTTGGAGGTATAATTGGAAAGGGAGGAAGTATAATTAAAGCA
CTTCAGCATGAGACTGGGTGTCAAATCAAAGTTCTGGAAGCCACAGGGGATTCTGAAGAT
CGAATTATTGTCATCTCTGGTCCAGCGTTCCCAGATGATAGAATATCTTTGCCGCAAGAT
GCTGTCCTTCGCATCCAATCCCGAATTTTTAGGGCTGCACCTGAGAATCAGGACAATGTT
ATGGTTGCAAAACTCTTGGTGTTCTCCAATCAAATTGGGTGTCTCTTGGGTAAAGGTGGT
GGTATAATAGCTGAAATGAGGAAATCAACTGGAGCGTATATTCGTATTGTAGGCAAGGAT
CAAATCCCAAAGTGTGCTGCGGAAAATGAAGAAGTAATTCAGATAAATGGAGATGTTGAA
AAAGTTCATGAAGCCCTTCTGCAGATAACTGCCAGATTACAGAATCATTACTTTCGTGAT
GCATTTCCTTCAAACCCTGGGTTTCTGGACCAAGTACCTCCATTCCCTTCACACATGGGA
AGGAGAGAATTTTCACCACCTCCAGGCATGTTCCCCAACATTCGTCCACCATTTCACAAG
TTTGATGCTCTACCTCCACATGGTGGTTTCCATCCACATGATGATCGTCCTCCCTTTATG
CAAAATTTCCATAGGCCAGGCATTCCACCTCATATTTCTGATAGAATGCCATCTTCAGCA
CCATGGGGTTCTCAGGGACGGGGTGAAGGTGGGGGACATCTAGGCTTCCCAGACTATGCA
GGAGGTCCTCGAAATATTGGCGGCTTTGGAGGAGGAAGTAATCCCGCTGTGATCACAAGC
ACTACCGTGGAAGTTGTTGTACCTCGATCTGTCATTCCTGCAATCTATGGAGAAGGTGGG
GGATGTCTTCGACAAATATGTGAGATTTCTGATGCGAAAGTCACCATAAATGATCCCAAG
CCTGGAGCAACAGAGACTGTGATCATTATATCTGGTACGCCTGAGCAGACGAATGCTGCT
CAGAGTCTCATTCAAGCATTTGTCATGGTCGAGACTGAAGGTGCTTGA