Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012579
CDS Infomation

pacid=37471995 polypeptide=PGSC0003DMP400008738 locus=PGSC0003DMG400004917 ID=PGSC0003DMT400012579.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGGTAAGCGTAGCAGTGAGAGTGAGACCTGCGAGAAGTAACGAAGAGAATTTA
AATGGAACCTTCTGGAAGGTTGAAGACAATCGGATTTCTCTTCACAAGTCTCTCGGAACT
CCAATTTCCGGCGTATCCTACACTTTCGATCATGTCTTCGATCAGGATTGTTCGAATGCT
AGGGTTTATGACCTTCTTACTAAGGACGTTATTCATGCTGCTCTTGAAGGTTTCAATGGA
ACTGCTTTTGCATATGGACAGACCAGTAGTGGAAAAACTTTCACTATGAATGGTACTCAG
AATGATCCAGGAATCATCCAGCGTGCAGTCAATGAAATATTTCAGAAAATTGAGATGACG
ACTAATAGGGAGTTTCTGATTCGAGTCTCTTATATGGAAATCTACAATGAAGACATAAAT
GATCTGTTTGCTGTAGAGAACCAGAAACTGCAGATTCATGAAAGTTTGGATCGTGGAGTT
TTTGTTGCAGGGCTGAGGGAGGAAATTGTGAATGATGCTGAACAAGTACTTGAGCTCATT
CAGCGAGGAGAAGTTAACAGGCATTTTGGTGAAACTAACATGAATGTTAGAAGCAGTAGA
TCTCACACCATCTTCAGGATGGTAATTGAAAGCAAAGGAAAGCATAATCCTGATGAAGCT
GTTCGTGTCTCTGTTTTGAATTTAGTAGATTTAGCTGGGTCTGAACGGATTGCCAAAACT
GGAGCTGGGGGAGTTCGTTTGAAGGAAGGAAAGCACATTAACAAGAGTCTAATGATCCTT
GGTAATGTTATCAATAAACTAAGTGAAGGTGGAAAGCAAAGGGGACACATTCCTTACCGC
GACAGTAAACTCACTCGCATTCTTCAACCTGCTTTGGGTGGCAATGCTAAAACTTCTATA
ATTTGCACAGTAGCACCAGAAGAGGTTCACATTGAGGAGTCAAAGGGAACACTCCAATTT
GCTAGCAGAGCTAAACGGATCACCAACTGTGTTCAAGTGAATGAGATACTAAATGATGCA
GCCTTATTAAAGCGGCAAAAAAGGGAAATAGAGGAACTACGCATGAAACTTCAGGGATCA
CATTCCGAGGTGCTTGAGCAAGAGATACTGAAACTCAGAAATGACCTACTGACGTACGAA
TTAGAGCGAGAGAAGCTTGCCATGGAATTGGAGGAGGAGAGAAGATCACAGAAAGAGCGA
GAGCAATGCATCATTGAACAACAGAAAAACGTCCATAATCTCAGTAATCTTACATCTGTG
TCAGGCTCTAATGGGCATGCTACACAGGAGGAAAGCGGTAATAGTAACAGTTGCCAGGAA
GATGCTTTTAGTACCCCTTGTTTGAAGGCGGCTCCCAATGCCTTTGTTGCTAAGAGATCG
CAACGGTCTCAACAGACAGAATACAGCCCTATGCCAGATGCCTTTAGCAATTTTGCAGAT
GAAGATATGTGGATGAAAATGAATAAAGGCTTTGTTGCTGATCTTGATTCACTTCACATG
ACTCCTGCAGTGAAAGTTAAATCATCTTTACTCGATGATGAAAATGATGATTTGTCAACA
GAGAATTATAAGCAAGAGGTACAGAATCTCAGAAGACAGTTGGAACTTGTTTCAGAGGAA
AGAGATGAACTTAGGAGGCACCATACAGAACAAGTATCACTAAATAAACAGCTAATGAGT
GAGGTATCTGAACTTCAGCAAGAGGCACTTTTGATCCGTGAGATCCCTCAAAGATTGTGC
GAGTCTGTGACAACTTGTAAAGATTTATACAAGGACGTCTTTTCAGTCATACAGAACTTT
GTAGCTACAGACAAATCTGGAATGGCCAAATTGCTCTCTACAACAAATGAGATTGGTACT
TGTCTTTTTTCAACTCTGGAATCTCACTTCTCAGAAGCTATGGACAGTGATAAGTCCTCT
ATTGGAAATAATTCTTCAATTGAAGCGCAACATGTCAAGGTTTATGATAAGTTGAATAGA
ACAATTTCATCACTTGTACTATCAGATGATGAAATCTCAAGTAATCCATCACTCGGCTCC
CAATATAAGGACTGCACTCTGGGTGGAGAAATTGCTTGTTGGAAGAAGAAACTGGATGAA
GATATCAAAACGATCCAGGAAAAATACCAGAACTTGGAAAAGGAGTTGGACCTCAATAAT
CAGCTTCTTGCCACTTCCAGGGATAGATATAATAGCTTAGAAAGGGAATTTCATCTCTTG
AAAGAAGAGAGGGATGTGTTGGTGCAAAATGTTTCCTCTTCAAGCGAGAAGCTCGAACTG
TTTACTAACCAAAACGAAAAGGTATTGGACACTTTGAATGCCGAAGTTAAGAGGAGGAAA
CACCTCGAAGAAGAGATTAAACAGTTTACTGCTGCTTTTGCATTTCGACAGAGCTCCCTT
GTCTCCCTTCGTAGTGACTTCGATTCTGTGATTGACAGTTTTAAGGCACAGAAGCCAATT
TCAATATCCAGATCTCCTGGATTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008738
PEP Infomation

pacid=37471995 transcript=PGSC0003DMT400012579 locus=PGSC0003DMG400004917 ID=PGSC0003DMT400012579.v4.03 annot-version=v4.03
Sequence

MEKVSVAVRVRPARSNEENLNGTFWKVEDNRISLHKSLGTPISGVSYTFDHVFDQDCSNA
RVYDLLTKDVIHAALEGFNGTAFAYGQTSSGKTFTMNGTQNDPGIIQRAVNEIFQKIEMT
TNREFLIRVSYMEIYNEDINDLFAVENQKLQIHESLDRGVFVAGLREEIVNDAEQVLELI
QRGEVNRHFGETNMNVRSSRSHTIFRMVIESKGKHNPDEAVRVSVLNLVDLAGSERIAKT
GAGGVRLKEGKHINKSLMILGNVINKLSEGGKQRGHIPYRDSKLTRILQPALGGNAKTSI
ICTVAPEEVHIEESKGTLQFASRAKRITNCVQVNEILNDAALLKRQKREIEELRMKLQGS
HSEVLEQEILKLRNDLLTYELEREKLAMELEEERRSQKEREQCIIEQQKNVHNLSNLTSV
SGSNGHATQEESGNSNSCQEDAFSTPCLKAAPNAFVAKRSQRSQQTEYSPMPDAFSNFAD
EDMWMKMNKGFVADLDSLHMTPAVKVKSSLLDDENDDLSTENYKQEVQNLRRQLELVSEE
RDELRRHHTEQVSLNKQLMSEVSELQQEALLIREIPQRLCESVTTCKDLYKDVFSVIQNF
VATDKSGMAKLLSTTNEIGTCLFSTLESHFSEAMDSDKSSIGNNSSIEAQHVKVYDKLNR
TISSLVLSDDEISSNPSLGSQYKDCTLGGEIACWKKKLDEDIKTIQEKYQNLEKELDLNN
QLLATSRDRYNSLEREFHLLKEERDVLVQNVSSSSEKLELFTNQNEKVLDTLNAEVKRRK
HLEEEIKQFTAAFAFRQSSLVSLRSDFDSVIDSFKAQKPISISRSPGF*

Transcript Sequence

Transcript ID

PGSC0003DMT400012579
Transcript Infomation

pacid=37471995 locus=PGSC0003DMG400004917 ID=PGSC0003DMT400012579.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGGTAAGCGTAGCAGTGAGAGTGAGACCTGCGAGAAGTAACGAAGAGAATTTA
AATGGAACCTTCTGGAAGGTTGAAGACAATCGGATTTCTCTTCACAAGTCTCTCGGAACT
CCAATTTCCGGCGTATCCTACACTTTCGATCATGTCTTCGATCAGGATTGTTCGAATGCT
AGGGTTTATGACCTTCTTACTAAGGACGTTATTCATGCTGCTCTTGAAGGTTTCAATGGA
ACTGCTTTTGCATATGGACAGACCAGTAGTGGAAAAACTTTCACTATGAATGGTACTCAG
AATGATCCAGGAATCATCCAGCGTGCAGTCAATGAAATATTTCAGAAAATTGAGATGACG
ACTAATAGGGAGTTTCTGATTCGAGTCTCTTATATGGAAATCTACAATGAAGACATAAAT
GATCTGTTTGCTGTAGAGAACCAGAAACTGCAGATTCATGAAAGTTTGGATCGTGGAGTT
TTTGTTGCAGGGCTGAGGGAGGAAATTGTGAATGATGCTGAACAAGTACTTGAGCTCATT
CAGCGAGGAGAAGTTAACAGGCATTTTGGTGAAACTAACATGAATGTTAGAAGCAGTAGA
TCTCACACCATCTTCAGGATGGTAATTGAAAGCAAAGGAAAGCATAATCCTGATGAAGCT
GTTCGTGTCTCTGTTTTGAATTTAGTAGATTTAGCTGGGTCTGAACGGATTGCCAAAACT
GGAGCTGGGGGAGTTCGTTTGAAGGAAGGAAAGCACATTAACAAGAGTCTAATGATCCTT
GGTAATGTTATCAATAAACTAAGTGAAGGTGGAAAGCAAAGGGGACACATTCCTTACCGC
GACAGTAAACTCACTCGCATTCTTCAACCTGCTTTGGGTGGCAATGCTAAAACTTCTATA
ATTTGCACAGTAGCACCAGAAGAGGTTCACATTGAGGAGTCAAAGGGAACACTCCAATTT
GCTAGCAGAGCTAAACGGATCACCAACTGTGTTCAAGTGAATGAGATACTAAATGATGCA
GCCTTATTAAAGCGGCAAAAAAGGGAAATAGAGGAACTACGCATGAAACTTCAGGGATCA
CATTCCGAGGTGCTTGAGCAAGAGATACTGAAACTCAGAAATGACCTACTGACGTACGAA
TTAGAGCGAGAGAAGCTTGCCATGGAATTGGAGGAGGAGAGAAGATCACAGAAAGAGCGA
GAGCAATGCATCATTGAACAACAGAAAAACGTCCATAATCTCAGTAATCTTACATCTGTG
TCAGGCTCTAATGGGCATGCTACACAGGAGGAAAGCGGTAATAGTAACAGTTGCCAGGAA
GATGCTTTTAGTACCCCTTGTTTGAAGGCGGCTCCCAATGCCTTTGTTGCTAAGAGATCG
CAACGGTCTCAACAGACAGAATACAGCCCTATGCCAGATGCCTTTAGCAATTTTGCAGAT
GAAGATATGTGGATGAAAATGAATAAAGGCTTTGTTGCTGATCTTGATTCACTTCACATG
ACTCCTGCAGTGAAAGTTAAATCATCTTTACTCGATGATGAAAATGATGATTTGTCAACA
GAGAATTATAAGCAAGAGGTACAGAATCTCAGAAGACAGTTGGAACTTGTTTCAGAGGAA
AGAGATGAACTTAGGAGGCACCATACAGAACAAGTATCACTAAATAAACAGCTAATGAGT
GAGGTATCTGAACTTCAGCAAGAGGCACTTTTGATCCGTGAGATCCCTCAAAGATTGTGC
GAGTCTGTGACAACTTGTAAAGATTTATACAAGGACGTCTTTTCAGTCATACAGAACTTT
GTAGCTACAGACAAATCTGGAATGGCCAAATTGCTCTCTACAACAAATGAGATTGGTACT
TGTCTTTTTTCAACTCTGGAATCTCACTTCTCAGAAGCTATGGACAGTGATAAGTCCTCT
ATTGGAAATAATTCTTCAATTGAAGCGCAACATGTCAAGGTTTATGATAAGTTGAATAGA
ACAATTTCATCACTTGTACTATCAGATGATGAAATCTCAAGTAATCCATCACTCGGCTCC
CAATATAAGGACTGCACTCTGGGTGGAGAAATTGCTTGTTGGAAGAAGAAACTGGATGAA
GATATCAAAACGATCCAGGAAAAATACCAGAACTTGGAAAAGGAGTTGGACCTCAATAAT
CAGCTTCTTGCCACTTCCAGGGATAGATATAATAGCTTAGAAAGGGAATTTCATCTCTTG
AAAGAAGAGAGGGATGTGTTGGTGCAAAATGTTTCCTCTTCAAGCGAGAAGCTCGAACTG
TTTACTAACCAAAACGAAAAGGTATTGGACACTTTGAATGCCGAAGTTAAGAGGAGGAAA
CACCTCGAAGAAGAGATTAAACAGTTTACTGCTGCTTTTGCATTTCGACAGAGCTCCCTT
GTCTCCCTTCGTAGTGACTTCGATTCTGTGATTGACAGTTTTAAGGCACAGAAGCCAATT
TCAATATCCAGATCTCCTGGATTCTAA