Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012567
CDS Infomation

pacid=37473786 polypeptide=PGSC0003DMP400008727 locus=PGSC0003DMG400004912 ID=PGSC0003DMT400012567.v4.03 annot-version=v4.03
Sequence

ATGTCATGGCTTGCTCGTTCCATAGCCAACACTCTCCGTCTCGACGACGATGAAGATAAC
GATAACGATAACGAAGACGGAGTAGAATTCAATCGCAACTCCCAAAACGACGTCGTAACA
CGTGCTGCCAACTCATCAACTGCTTCTCACGCCGTTGACGAAGATACATCCACCTACGAA
GAAATCGATTTAGAAGAACGATCTAATAACGATTACCGTTCTGGTTCCGATGTTGATGAT
GAGGATAATCAGAATCGCGGCGTGAAGGAGGATTTGTCTGAACTGAAGGAAACCCTAACG
CGTCAATTATGGGGAGTGGCTTCATTTCTAGCTCCACCACCTCCGCCATTACCGCCGGGG
AAATCGGATCTGTTTGGTTTGGATGGGGACCGGATTGAGAATTCCGGATTGAGTGATGGA
TCCGAGGAGGAAGAGGGGGAATATATTGGGGATGGAGATGGTTATTTGGAGAATTCGGAT
GAAGTGGAGGAGGGTGAAAGTGATGCTGTTGGAGTGACAGAGGAAGTGTTAGCTTTTGCT
ACCAATATAGCTCATCATCCGGAGACTTGGTTGGATTTTCCGTTAGCTGATGAAGAGGAA
TTTGATGATTTTGAGCTCTCTGAGGCCCAACTGAGGCATGCATATGCTGTTGAACGTCTA
ACGCCGAGACTAGCTGCTCTCAGATTCGAACTTTCTCCTACTCATTTGAGTGAAGGCTTC
TTTTGGATGGTCTATTTTGTTCTGCTTTACTCAAGATTGAAAAAGCAGGACGCTGAGCTT
TTGTCTACATCTCAGCTTGTAGAGGCAAGGGCTATGTGGATGCAAGAGCTGCAAAAGAAA
ACAAAACCAGAGTCAGATTGGTTTGGCATAGGCACATTTCAAGCAAAAGAGAGCACATAT
TCACCACGTGGAGACTTTGAATCCAACTCATCTGAAGATGCTCACTCTAGATATTTTGTG
CTCCCAAGAGTATTTGCTTTTGAACCTCCAAGTTGCCACACCACTTCTGACACTGAGACT
GAGAAACACTCAATTGAAAATACAGAGATCCAATTTATTGACAAGGCAGTTATTGAAGAA
GATGCTCCAAGCAAAATCATTGAAAAGGAGGTGGTAGCTGGTCCATCTTTTAAACCACCA
GTGTTTGATTATGATGAGCATGAGGATGACTGGCTGAAAGACAACTCAGAGTTAGAGGGT
TACACGGGTTCTACTATTGTGAATGAGGAGGATGTTTCGTTTAGTGATCTTGAAGATGAT
ACTGATTATACAATGCCTATAAAACCTAAATCAGTGTCAATAAATCATAGCACAACACTT
AATGTCTCGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008727
PEP Infomation

pacid=37473786 transcript=PGSC0003DMT400012567 locus=PGSC0003DMG400004912 ID=PGSC0003DMT400012567.v4.03 annot-version=v4.03
Sequence

MSWLARSIANTLRLDDDEDNDNDNEDGVEFNRNSQNDVVTRAANSSTASHAVDEDTSTYE
EIDLEERSNNDYRSGSDVDDEDNQNRGVKEDLSELKETLTRQLWGVASFLAPPPPPLPPG
KSDLFGLDGDRIENSGLSDGSEEEEGEYIGDGDGYLENSDEVEEGESDAVGVTEEVLAFA
TNIAHHPETWLDFPLADEEEFDDFELSEAQLRHAYAVERLTPRLAALRFELSPTHLSEGF
FWMVYFVLLYSRLKKQDAELLSTSQLVEARAMWMQELQKKTKPESDWFGIGTFQAKESTY
SPRGDFESNSSEDAHSRYFVLPRVFAFEPPSCHTTSDTETEKHSIENTEIQFIDKAVIEE
DAPSKIIEKEVVAGPSFKPPVFDYDEHEDDWLKDNSELEGYTGSTIVNEEDVSFSDLEDD
TDYTMPIKPKSVSINHSTTLNVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400012567
Transcript Infomation

pacid=37473786 locus=PGSC0003DMG400004912 ID=PGSC0003DMT400012567.v4.03 annot-version=v4.03
Sequence

ATGTCATGGCTTGCTCGTTCCATAGCCAACACTCTCCGTCTCGACGACGATGAAGATAAC
GATAACGATAACGAAGACGGAGTAGAATTCAATCGCAACTCCCAAAACGACGTCGTAACA
CGTGCTGCCAACTCATCAACTGCTTCTCACGCCGTTGACGAAGATACATCCACCTACGAA
GAAATCGATTTAGAAGAACGATCTAATAACGATTACCGTTCTGGTTCCGATGTTGATGAT
GAGGATAATCAGAATCGCGGCGTGAAGGAGGATTTGTCTGAACTGAAGGAAACCCTAACG
CGTCAATTATGGGGAGTGGCTTCATTTCTAGCTCCACCACCTCCGCCATTACCGCCGGGG
AAATCGGATCTGTTTGGTTTGGATGGGGACCGGATTGAGAATTCCGGATTGAGTGATGGA
TCCGAGGAGGAAGAGGGGGAATATATTGGGGATGGAGATGGTTATTTGGAGAATTCGGAT
GAAGTGGAGGAGGGTGAAAGTGATGCTGTTGGAGTGACAGAGGAAGTGTTAGCTTTTGCT
ACCAATATAGCTCATCATCCGGAGACTTGGTTGGATTTTCCGTTAGCTGATGAAGAGGAA
TTTGATGATTTTGAGCTCTCTGAGGCCCAACTGAGGCATGCATATGCTGTTGAACGTCTA
ACGCCGAGACTAGCTGCTCTCAGATTCGAACTTTCTCCTACTCATTTGAGTGAAGGCTTC
TTTTGGATGGTCTATTTTGTTCTGCTTTACTCAAGATTGAAAAAGCAGGACGCTGAGCTT
TTGTCTACATCTCAGCTTGTAGAGGCAAGGGCTATGTGGATGCAAGAGCTGCAAAAGAAA
ACAAAACCAGAGTCAGATTGGTTTGGCATAGGCACATTTCAAGCAAAAGAGAGCACATAT
TCACCACGTGGAGACTTTGAATCCAACTCATCTGAAGATGCTCACTCTAGATATTTTGTG
CTCCCAAGAGTATTTGCTTTTGAACCTCCAAGTTGCCACACCACTTCTGACACTGAGACT
GAGAAACACTCAATTGAAAATACAGAGATCCAATTTATTGACAAGGCAGTTATTGAAGAA
GATGCTCCAAGCAAAATCATTGAAAAGGAGGTGGTAGCTGGTCCATCTTTTAAACCACCA
GTGTTTGATTATGATGAGCATGAGGATGACTGGCTGAAAGACAACTCAGAGTTAGAGGGT
TACACGGGTTCTACTATTGTGAATGAGGAGGATGTTTCGTTTAGTGATCTTGAAGATGAT
ACTGATTATACAATGCCTATAAAACCTAAATCAGTGTCAATAAATCATAGCACAACACTT
AATGTCTCGTGA