Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012552
CDS Infomation

pacid=37451780 polypeptide=PGSC0003DMP400008717 locus=PGSC0003DMG400004900 ID=PGSC0003DMT400012552.v4.03 annot-version=v4.03
Sequence

ATGGCAGATGTTTTGCAAACCCATGGTAAACTAGATGATCCAAGTATGATTGAGTTGACT
GGGAAAATACTAGTGGTAGCAGTCATAGTTCTCTTTCTTGTAGTGATGTTGGTCTTCTTT
CTTCACCTTTACTCAAAATGGTTCTGGAACCAACGCCGGCAAGCGGACAATCACCGCAAT
GCCGCCACACGGCAGCGGCGGCGCCGCCGTCGTTTCGACTTTTCTCCAGGTCATGAAGTT
AATGTTACATCTGTTCTCAACAGGGGGCTTGACCCTGTTCTTCTGAAAACAATTCCGGTA
GTTTTATTCAATCACGAAGAATTCAAAGATGGATTGGAATGTGCTGTTTGTCTTTGCGAT
GTTTCTGAAGGTGAAATGGCGAGACTTTTGCCTAAATGCAATCATGGGTTTCATGTAGAT
TGCATTGATATGTGGTTTCAATCTCATTCTACATGCCCGCTTTGTCGAAACCCAGTCATG
TTACAAGAATCAACAATGGAAAACTTACTTAGAACACCAGTAGAAGAAGAGGATTCAGCT
GAGGTGATAAATTTTCCAACTAATGTGTTGTTTTGGGGAAATGAGACTCAAGTGAGCACA
ATGGGTTCAAATAATTTGGAGGAAGATTTGCAGGGTCCTAATTCTCCTCCTCCACCACCA
CCACCAGTAGCAGCACCATCATCGTCATCCTCGTTAGATTCTACGAGTGATAGGCCGTGT
GTTTCATTGGTAATCGATATTCCAAGGCAGATTAACGAAGTAGTTGAAGAGGAAGAAGAT
AAATCTCCAATGCCCACAAGATTGAGGTCTTTGAAAAGGCTCTTGAGTAGGGATAAGAGG
GCTAATCCTTCTAGTCCAAGAATTAATGTAGATTTAGAACAAGGAGGCAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400008717
PEP Infomation

pacid=37451780 transcript=PGSC0003DMT400012552 locus=PGSC0003DMG400004900 ID=PGSC0003DMT400012552.v4.03 annot-version=v4.03
Sequence

MADVLQTHGKLDDPSMIELTGKILVVAVIVLFLVVMLVFFLHLYSKWFWNQRRQADNHRN
AATRQRRRRRRFDFSPGHEVNVTSVLNRGLDPVLLKTIPVVLFNHEEFKDGLECAVCLCD
VSEGEMARLLPKCNHGFHVDCIDMWFQSHSTCPLCRNPVMLQESTMENLLRTPVEEEDSA
EVINFPTNVLFWGNETQVSTMGSNNLEEDLQGPNSPPPPPPPVAAPSSSSSLDSTSDRPC
VSLVIDIPRQINEVVEEEEDKSPMPTRLRSLKRLLSRDKRANPSSPRINVDLEQGGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400012552
Transcript Infomation

pacid=37451780 locus=PGSC0003DMG400004900 ID=PGSC0003DMT400012552.v4.03 annot-version=v4.03
Sequence

ATGGCAGATGTTTTGCAAACCCATGGTAAACTAGATGATCCAAGTATGATTGAGTTGACT
GGGAAAATACTAGTGGTAGCAGTCATAGTTCTCTTTCTTGTAGTGATGTTGGTCTTCTTT
CTTCACCTTTACTCAAAATGGTTCTGGAACCAACGCCGGCAAGCGGACAATCACCGCAAT
GCCGCCACACGGCAGCGGCGGCGCCGCCGTCGTTTCGACTTTTCTCCAGGTCATGAAGTT
AATGTTACATCTGTTCTCAACAGGGGGCTTGACCCTGTTCTTCTGAAAACAATTCCGGTA
GTTTTATTCAATCACGAAGAATTCAAAGATGGATTGGAATGTGCTGTTTGTCTTTGCGAT
GTTTCTGAAGGTGAAATGGCGAGACTTTTGCCTAAATGCAATCATGGGTTTCATGTAGAT
TGCATTGATATGTGGTTTCAATCTCATTCTACATGCCCGCTTTGTCGAAACCCAGTCATG
TTACAAGAATCAACAATGGAAAACTTACTTAGAACACCAGTAGAAGAAGAGGATTCAGCT
GAGGTGATAAATTTTCCAACTAATGTGTTGTTTTGGGGAAATGAGACTCAAGTGAGCACA
ATGGGTTCAAATAATTTGGAGGAAGATTTGCAGGGTCCTAATTCTCCTCCTCCACCACCA
CCACCAGTAGCAGCACCATCATCGTCATCCTCGTTAGATTCTACGAGTGATAGGCCGTGT
GTTTCATTGGTAATCGATATTCCAAGGCAGATTAACGAAGTAGTTGAAGAGGAAGAAGAT
AAATCTCCAATGCCCACAAGATTGAGGTCTTTGAAAAGGCTCTTGAGTAGGGATAAGAGG
GCTAATCCTTCTAGTCCAAGAATTAATGTAGATTTAGAACAAGGAGGCAGATGA