Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012545
CDS Infomation

pacid=37452698 polypeptide=PGSC0003DMP400008713 locus=PGSC0003DMG400004896 ID=PGSC0003DMT400012545.v4.03 annot-version=v4.03
Sequence

ATGTCGTACCCATCGTCTCATATGGCAAATGAAAGAATCAATTCATTAATCATACCGTCT
GTGGAGCAATTTCGAAGGGTGCGGCAATCAAAAGGAAACCAGGAGCTGAATGATGAGTTG
AAAATAAAAGCAAATGAACTCGAAAAGCTTTTCGCAGAGCATCAATTGCGCACTCCTACG
TCAGCTGGAAATTATCAATCTAATTATTTTACCAGAAGCAAAACTAGTAGGCATGGTCAC
ATGCAAAGCTGGCCATCAGCTATTGACAATGCCGGCGGCGCCTTTCTGGAGGATCAAGTA
TTTGATAATGATAGTATTAATATAGATAAAAACTCTTCTGATCATGAGTTAATTGGTTTT
GCGGGTTCTCCGGGGAAATTCTATGATATGTATATGCAGAAAAGGGATGCGAAACTTAGG
GATGAATGGAATACTAAAGGAGCGGAGAAGGAAGCGAAGCTGAGGGCTATGGAGGATTGT
CTTGAGAGGAGTACAGCTCAAATGAAGAGTATTGAGAGACGCAGATCGTTTAGCTCCAGC
TCAATCTTTAGCAGAGACCAGCAACAATCAGTACTCTTTCAGCAATGTGATGATAGAGAA
GATATGTCTGAATTCATGAATCAGAAAAGGAATGATGTACTCAGGTCTTCTAGTGAAACA
TCTTTGGAAGAAGTTTCTAAGCATACTACTGCTCCGAGGAAGAAACAAAATTTACCTATC
AAACCTTCATCCAAACCTCGGAACATAGTAGTAGCATCTGTTCCGAGGTCTCCTATGAAG
GTTTCTAGTAGTCCTTCCAGTCAGCGAAAATCTCAAGCTGAAAGTCCACTTGCACGATCC
GTTCCAAACTTGTCTTACATGAGAAAGGAAAATGCTGAGCCTTATTCTCCAGCTGGTAAA
ACAACTCCTCGTGCACCTTATTCGCGTAGCAAATTACTGCACTCACAGTCCTTAAGAAAA
AGCTCTGCTATGAATTCTGAGGGTGTTATGTTGGCACCTCTCAAATTTGACAAAGACAAA
ATGGAACAAAGTCCTAAGTGTGTAATGTCAGCACCTCCTAAATCTGTGAAGGACAAGATG
GGACAGAGTCTCAGTGATAAATTTTCCAACATTTCGGATACAAAGACCTCACTAAAGAAG
GGAAAAGATGCTGATTTCAGTTCAAGAGGTGGTTTGACTGAGACAACAAGGGGTTCTAAC
ATTGCATCTACGTTTACGCACAACGATGGTGAGGATGTTGATGACATGGAATTGGATTCT
GAGGACTCAATGGGTAGAGATGTGGATGAATTTGAGAACATGATATCTGCAGTTGAGGAA
AATTTTGATATTGGGGCACCAAGACCGAGTCATGAGATGGAGAAGAAAAGTCCTGGACCA
GAAAATAGACGTTTACTGAGATCACTTTCTCAAGTTTGCTATGCTTCGGAAGCCGGATAT
TCACCTTCTTCTGTGCCTTCCAACTTCCTAAATAGTCCTGTCTCACAGACTCATGAGATA
TCTGATGTTGATGCTTTAGACTCTCCTGTGGGAAGTCCTACATCCTGGGATTCACATTTT
CTGAGTTCAACACAGGCGAATGGTGCTACTAGAACGAGGAAGAAATGGGGAACGACAGCT
CAGAATCCAATCAATATCATAAAATCTTCTCAAAGTCTTTCACGGAAGGATAAGGCCAGA
GGATTTAAGCGATTACTAAAGTTTGGGAGGAAAAACCCTGACGCAGATAGTCTGGTTAAA
GACTGGATTGCTGCAACTACCTCTAAAGGAGATGATTGCACAAGAAATGGACATGATAGT
CGCCATTGCTCTAATGATAGCTTATATGAGGATGTGCTTTTAAACGAACGAGTTCAATCC
TTGCACAGGTCTATTCCGGCACCTCCAGCTAACTTCAAACCGAGGGAGAATCATTTATCA
GGAAGCTCAATAAAGGCTCCAAGATCATTCTTTTCTTTATCGTCATTCAGAAGCAAAGGA
AAGGACTCGAAGCCAAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400008713
PEP Infomation

pacid=37452698 transcript=PGSC0003DMT400012545 locus=PGSC0003DMG400004896 ID=PGSC0003DMT400012545.v4.03 annot-version=v4.03
Sequence

MSYPSSHMANERINSLIIPSVEQFRRVRQSKGNQELNDELKIKANELEKLFAEHQLRTPT
SAGNYQSNYFTRSKTSRHGHMQSWPSAIDNAGGAFLEDQVFDNDSINIDKNSSDHELIGF
AGSPGKFYDMYMQKRDAKLRDEWNTKGAEKEAKLRAMEDCLERSTAQMKSIERRRSFSSS
SIFSRDQQQSVLFQQCDDREDMSEFMNQKRNDVLRSSSETSLEEVSKHTTAPRKKQNLPI
KPSSKPRNIVVASVPRSPMKVSSSPSSQRKSQAESPLARSVPNLSYMRKENAEPYSPAGK
TTPRAPYSRSKLLHSQSLRKSSAMNSEGVMLAPLKFDKDKMEQSPKCVMSAPPKSVKDKM
GQSLSDKFSNISDTKTSLKKGKDADFSSRGGLTETTRGSNIASTFTHNDGEDVDDMELDS
EDSMGRDVDEFENMISAVEENFDIGAPRPSHEMEKKSPGPENRRLLRSLSQVCYASEAGY
SPSSVPSNFLNSPVSQTHEISDVDALDSPVGSPTSWDSHFLSSTQANGATRTRKKWGTTA
QNPINIIKSSQSLSRKDKARGFKRLLKFGRKNPDADSLVKDWIAATTSKGDDCTRNGHDS
RHCSNDSLYEDVLLNERVQSLHRSIPAPPANFKPRENHLSGSSIKAPRSFFSLSSFRSKG
KDSKPR*

Transcript Sequence

Transcript ID

PGSC0003DMT400012545
Transcript Infomation

pacid=37452698 locus=PGSC0003DMG400004896 ID=PGSC0003DMT400012545.v4.03 annot-version=v4.03
Sequence

ATGTCGTACCCATCGTCTCATATGGCAAATGAAAGAATCAATTCATTAATCATACCGTCT
GTGGAGCAATTTCGAAGGGTGCGGCAATCAAAAGGAAACCAGGAGCTGAATGATGAGTTG
AAAATAAAAGCAAATGAACTCGAAAAGCTTTTCGCAGAGCATCAATTGCGCACTCCTACG
TCAGCTGGAAATTATCAATCTAATTATTTTACCAGAAGCAAAACTAGTAGGCATGGTCAC
ATGCAAAGCTGGCCATCAGCTATTGACAATGCCGGCGGCGCCTTTCTGGAGGATCAAGTA
TTTGATAATGATAGTATTAATATAGATAAAAACTCTTCTGATCATGAGTTAATTGGTTTT
GCGGGTTCTCCGGGGAAATTCTATGATATGTATATGCAGAAAAGGGATGCGAAACTTAGG
GATGAATGGAATACTAAAGGAGCGGAGAAGGAAGCGAAGCTGAGGGCTATGGAGGATTGT
CTTGAGAGGAGTACAGCTCAAATGAAGAGTATTGAGAGACGCAGATCGTTTAGCTCCAGC
TCAATCTTTAGCAGAGACCAGCAACAATCAGTACTCTTTCAGCAATGTGATGATAGAGAA
GATATGTCTGAATTCATGAATCAGAAAAGGAATGATGTACTCAGGTCTTCTAGTGAAACA
TCTTTGGAAGAAGTTTCTAAGCATACTACTGCTCCGAGGAAGAAACAAAATTTACCTATC
AAACCTTCATCCAAACCTCGGAACATAGTAGTAGCATCTGTTCCGAGGTCTCCTATGAAG
GTTTCTAGTAGTCCTTCCAGTCAGCGAAAATCTCAAGCTGAAAGTCCACTTGCACGATCC
GTTCCAAACTTGTCTTACATGAGAAAGGAAAATGCTGAGCCTTATTCTCCAGCTGGTAAA
ACAACTCCTCGTGCACCTTATTCGCGTAGCAAATTACTGCACTCACAGTCCTTAAGAAAA
AGCTCTGCTATGAATTCTGAGGGTGTTATGTTGGCACCTCTCAAATTTGACAAAGACAAA
ATGGAACAAAGTCCTAAGTGTGTAATGTCAGCACCTCCTAAATCTGTGAAGGACAAGATG
GGACAGAGTCTCAGTGATAAATTTTCCAACATTTCGGATACAAAGACCTCACTAAAGAAG
GGAAAAGATGCTGATTTCAGTTCAAGAGGTGGTTTGACTGAGACAACAAGGGGTTCTAAC
ATTGCATCTACGTTTACGCACAACGATGGTGAGGATGTTGATGACATGGAATTGGATTCT
GAGGACTCAATGGGTAGAGATGTGGATGAATTTGAGAACATGATATCTGCAGTTGAGGAA
AATTTTGATATTGGGGCACCAAGACCGAGTCATGAGATGGAGAAGAAAAGTCCTGGACCA
GAAAATAGACGTTTACTGAGATCACTTTCTCAAGTTTGCTATGCTTCGGAAGCCGGATAT
TCACCTTCTTCTGTGCCTTCCAACTTCCTAAATAGTCCTGTCTCACAGACTCATGAGATA
TCTGATGTTGATGCTTTAGACTCTCCTGTGGGAAGTCCTACATCCTGGGATTCACATTTT
CTGAGTTCAACACAGGCGAATGGTGCTACTAGAACGAGGAAGAAATGGGGAACGACAGCT
CAGAATCCAATCAATATCATAAAATCTTCTCAAAGTCTTTCACGGAAGGATAAGGCCAGA
GGATTTAAGCGATTACTAAAGTTTGGGAGGAAAAACCCTGACGCAGATAGTCTGGTTAAA
GACTGGATTGCTGCAACTACCTCTAAAGGAGATGATTGCACAAGAAATGGACATGATAGT
CGCCATTGCTCTAATGATAGCTTATATGAGGATGTGCTTTTAAACGAACGAGTTCAATCC
TTGCACAGGTCTATTCCGGCACCTCCAGCTAACTTCAAACCGAGGGAGAATCATTTATCA
GGAAGCTCAATAAAGGCTCCAAGATCATTCTTTTCTTTATCGTCATTCAGAAGCAAAGGA
AAGGACTCGAAGCCAAGATAA