Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012537
CDS Infomation

pacid=37450155 polypeptide=PGSC0003DMP400008705 locus=PGSC0003DMG400004891 ID=PGSC0003DMT400012537.v4.03 annot-version=v4.03
Sequence

ATGGCGAAAATCTCCGTTCTTTCTAGTATATTTTTCATTATCTCTTTCTGCCTAACTCCG
GTGGCCATTTCCGTCCAATCCGACGGCCATGAAACTTTCATCATTCACGTAGCCAAATCC
GACAAGCCCCATGTCTTTTCCACCCATCACCATTGGTACTCTTCCATCGTCCGATCTATT
TCTCCGCCCTCTCACCACCGTTCTAAAATCCTCTACACCTACGAACGCGCCGCCGTGGGT
TTCTCCGCCCGTCTTACCGCCGGGCAGGCTGATCAGCTCCGCCGTGTTCCTGGGGTAATC
TCTGTCATTCCTGACCAAGTACGGTATCTCCACACCACCCATACCCCTACCTTCTTAAAA
CTTGCTGACTCCTTCGGCCTCTGGCCTGACTCTGACTATGCTGATGATGTCATTGTTGGG
GTTCTGGATACGGGTATTTGGCCGGAAAGACCTAGTTTTTCCGATGAGGGGTTATCTCCT
GTTCCTGCAGGTTGGAAAGGGAAATGCGTGACTGGACCGGGTTTTCCGCGAAGTTCATGT
AATCGGAAAATTATTGGTGCTCGGATGTTTTACAAAGGGTATGAAGCTTCACATGGTCCA
ATGGACGAATCAAAAGAAGCGAAATCACCGAGAGATACTGAAGGTCATGGAACACATACA
GCATCAACTGCAGCTGGTTCATTGGTAGCAAATGCTAGTTTTTACCAATATGCTAAAGGT
GAAGCTAGAGGAATGGCGATTAAAGCTAGAATAGCTGCTTACAAGATTTGTTGGAAAGAT
GGTTGTTTTGATTCCGATATACTGGCTGCCATGGATCAAGCTGTTGCTGATGGTGTTCAT
GTGATTTCACTTTCCGTCGGCGCTAACGGATATGCTCCACATTACCTCCATGACTCCATC
GCCATCGGAGCTTTTGGTGCCTCCGAACATGGGGTCCTCGTCTCATGCTCAGCTGGAAAT
TCCGGTCCCGGCCCTTACACAGCAGTGAACATTGCCCCGTGGATCCTTACAGTTGGTGCT
TCAACCATAGACCGAGAGTTTCCAGCTGATGTTATTCTAGGAGACGATAGAGTATTTGGT
GGCGTTTCCTTATACTCTGGCAATCCCTTAACCGATTCCAAATTTCCCGTGGTTTATTCC
GGTGATTGTGGTAGCAAATACTGTTATCCAGGAAAGCTGGACCATAAAAAAGTCGCCGGT
AAAATTGTCCTCTGCGACAGAGGAGGCAACGCTAGAGTTGAAAAAGGAAGTGCAGTGAAG
CTGGCAGGTGGTGTAGGAATGATACTCGCTAATTTAGCTGAATCCGGTGAAGAACTCGTT
GCAGATTCACATCTTCTCCCGGCGACAATGGTCGGTCAAAAAGCCGGAGACAAAATAAGA
GAATACGTCACGTCTGATACATCACCAACAGCTACAATCGTATTCAGAGGAACCGTGATC
GGAAATTCACCAGCGGCGCCGCGTGTGGCGGCGTTCTCAAGCCGCGGACCGAATCATTTA
ACGCCGGAGATTCTTAAACCGGATGTTATTGCACCCGGCGTCAACATTTTAGCCGGTTGG
ACCGGAAGCACCGGTCCAACCGATTTAGCAATTGACCCGAGAAGAGTAGAATTTAATATT
ATTTCAGGGACTTCCATGTCGTGTCCTCACGTTAGTGGATTAGCTGCTTTACTTAGAAGG
GCCCACTCAAAGTGGACCCCAGCAGCCATAAAGTCAGCACTCATGACAACAGCTTATAAT
TTGGACAATTCAGGTAAGATATTTACTGATCTTGCCACTGGTGAAGAATCCACACCTTTT
GTTCATGGATCCGGGCATGTGGATCCGAACCGAGCATTGGATCCGGGTTTGGTTTACGAT
ATTGAAACCAGCGACTACGTGAACTTCCTATGCACCATTGGCTATGACGGCGACGACATT
GCGGTGTTCGTGAGAGATTCTTCTCGGGTGAATTGCAGTGAACGGAGTTTGGCTACTCCG
GGAGATCTGAATTACCCGTCGTTCTCCGTTGATTTTACCAGTGATAGTAACGGTGTGGTG
AAATACAAGCGTGTGGTGAAGAATGTAGGGGGGGATTCAAATGCTGTGTATGAAGTGAAG
GTGAATGCACCTTCAGCTGTGGAGGTGAGTGTGTCACCGGCGAAGCTTGTTTTCAGTGAG
GAAAATAATAGTTTGTCATATGAGATTAGTTTTACGAGTAAAAGAAGTGAAGATATTATG
GTGAAGGGGATTCAATCTGCGTTTGGATCGATTGAATGGAGTGATGGGATTCACAGTGTG
AGAAGTCCAATTGCAGTGCGTTGGCGATACCAATCTGCTGTGTCCATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008705
PEP Infomation

pacid=37450155 transcript=PGSC0003DMT400012537 locus=PGSC0003DMG400004891 ID=PGSC0003DMT400012537.v4.03 annot-version=v4.03
Sequence

MAKISVLSSIFFIISFCLTPVAISVQSDGHETFIIHVAKSDKPHVFSTHHHWYSSIVRSI
SPPSHHRSKILYTYERAAVGFSARLTAGQADQLRRVPGVISVIPDQVRYLHTTHTPTFLK
LADSFGLWPDSDYADDVIVGVLDTGIWPERPSFSDEGLSPVPAGWKGKCVTGPGFPRSSC
NRKIIGARMFYKGYEASHGPMDESKEAKSPRDTEGHGTHTASTAAGSLVANASFYQYAKG
EARGMAIKARIAAYKICWKDGCFDSDILAAMDQAVADGVHVISLSVGANGYAPHYLHDSI
AIGAFGASEHGVLVSCSAGNSGPGPYTAVNIAPWILTVGASTIDREFPADVILGDDRVFG
GVSLYSGNPLTDSKFPVVYSGDCGSKYCYPGKLDHKKVAGKIVLCDRGGNARVEKGSAVK
LAGGVGMILANLAESGEELVADSHLLPATMVGQKAGDKIREYVTSDTSPTATIVFRGTVI
GNSPAAPRVAAFSSRGPNHLTPEILKPDVIAPGVNILAGWTGSTGPTDLAIDPRRVEFNI
ISGTSMSCPHVSGLAALLRRAHSKWTPAAIKSALMTTAYNLDNSGKIFTDLATGEESTPF
VHGSGHVDPNRALDPGLVYDIETSDYVNFLCTIGYDGDDIAVFVRDSSRVNCSERSLATP
GDLNYPSFSVDFTSDSNGVVKYKRVVKNVGGDSNAVYEVKVNAPSAVEVSVSPAKLVFSE
ENNSLSYEISFTSKRSEDIMVKGIQSAFGSIEWSDGIHSVRSPIAVRWRYQSAVSM*

Transcript Sequence

Transcript ID

PGSC0003DMT400012537
Transcript Infomation

pacid=37450155 locus=PGSC0003DMG400004891 ID=PGSC0003DMT400012537.v4.03 annot-version=v4.03
Sequence

ATGGCGAAAATCTCCGTTCTTTCTAGTATATTTTTCATTATCTCTTTCTGCCTAACTCCG
GTGGCCATTTCCGTCCAATCCGACGGCCATGAAACTTTCATCATTCACGTAGCCAAATCC
GACAAGCCCCATGTCTTTTCCACCCATCACCATTGGTACTCTTCCATCGTCCGATCTATT
TCTCCGCCCTCTCACCACCGTTCTAAAATCCTCTACACCTACGAACGCGCCGCCGTGGGT
TTCTCCGCCCGTCTTACCGCCGGGCAGGCTGATCAGCTCCGCCGTGTTCCTGGGGTAATC
TCTGTCATTCCTGACCAAGTACGGTATCTCCACACCACCCATACCCCTACCTTCTTAAAA
CTTGCTGACTCCTTCGGCCTCTGGCCTGACTCTGACTATGCTGATGATGTCATTGTTGGG
GTTCTGGATACGGGTATTTGGCCGGAAAGACCTAGTTTTTCCGATGAGGGGTTATCTCCT
GTTCCTGCAGGTTGGAAAGGGAAATGCGTGACTGGACCGGGTTTTCCGCGAAGTTCATGT
AATCGGAAAATTATTGGTGCTCGGATGTTTTACAAAGGGTATGAAGCTTCACATGGTCCA
ATGGACGAATCAAAAGAAGCGAAATCACCGAGAGATACTGAAGGTCATGGAACACATACA
GCATCAACTGCAGCTGGTTCATTGGTAGCAAATGCTAGTTTTTACCAATATGCTAAAGGT
GAAGCTAGAGGAATGGCGATTAAAGCTAGAATAGCTGCTTACAAGATTTGTTGGAAAGAT
GGTTGTTTTGATTCCGATATACTGGCTGCCATGGATCAAGCTGTTGCTGATGGTGTTCAT
GTGATTTCACTTTCCGTCGGCGCTAACGGATATGCTCCACATTACCTCCATGACTCCATC
GCCATCGGAGCTTTTGGTGCCTCCGAACATGGGGTCCTCGTCTCATGCTCAGCTGGAAAT
TCCGGTCCCGGCCCTTACACAGCAGTGAACATTGCCCCGTGGATCCTTACAGTTGGTGCT
TCAACCATAGACCGAGAGTTTCCAGCTGATGTTATTCTAGGAGACGATAGAGTATTTGGT
GGCGTTTCCTTATACTCTGGCAATCCCTTAACCGATTCCAAATTTCCCGTGGTTTATTCC
GGTGATTGTGGTAGCAAATACTGTTATCCAGGAAAGCTGGACCATAAAAAAGTCGCCGGT
AAAATTGTCCTCTGCGACAGAGGAGGCAACGCTAGAGTTGAAAAAGGAAGTGCAGTGAAG
CTGGCAGGTGGTGTAGGAATGATACTCGCTAATTTAGCTGAATCCGGTGAAGAACTCGTT
GCAGATTCACATCTTCTCCCGGCGACAATGGTCGGTCAAAAAGCCGGAGACAAAATAAGA
GAATACGTCACGTCTGATACATCACCAACAGCTACAATCGTATTCAGAGGAACCGTGATC
GGAAATTCACCAGCGGCGCCGCGTGTGGCGGCGTTCTCAAGCCGCGGACCGAATCATTTA
ACGCCGGAGATTCTTAAACCGGATGTTATTGCACCCGGCGTCAACATTTTAGCCGGTTGG
ACCGGAAGCACCGGTCCAACCGATTTAGCAATTGACCCGAGAAGAGTAGAATTTAATATT
ATTTCAGGGACTTCCATGTCGTGTCCTCACGTTAGTGGATTAGCTGCTTTACTTAGAAGG
GCCCACTCAAAGTGGACCCCAGCAGCCATAAAGTCAGCACTCATGACAACAGCTTATAAT
TTGGACAATTCAGGTAAGATATTTACTGATCTTGCCACTGGTGAAGAATCCACACCTTTT
GTTCATGGATCCGGGCATGTGGATCCGAACCGAGCATTGGATCCGGGTTTGGTTTACGAT
ATTGAAACCAGCGACTACGTGAACTTCCTATGCACCATTGGCTATGACGGCGACGACATT
GCGGTGTTCGTGAGAGATTCTTCTCGGGTGAATTGCAGTGAACGGAGTTTGGCTACTCCG
GGAGATCTGAATTACCCGTCGTTCTCCGTTGATTTTACCAGTGATAGTAACGGTGTGGTG
AAATACAAGCGTGTGGTGAAGAATGTAGGGGGGGATTCAAATGCTGTGTATGAAGTGAAG
GTGAATGCACCTTCAGCTGTGGAGGTGAGTGTGTCACCGGCGAAGCTTGTTTTCAGTGAG
GAAAATAATAGTTTGTCATATGAGATTAGTTTTACGAGTAAAAGAAGTGAAGATATTATG
GTGAAGGGGATTCAATCTGCGTTTGGATCGATTGAATGGAGTGATGGGATTCACAGTGTG
AGAAGTCCAATTGCAGTGCGTTGGCGATACCAATCTGCTGTGTCCATGTGA