Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012522
CDS Infomation

pacid=37450989 polypeptide=PGSC0003DMP400008694 locus=PGSC0003DMG400004886 ID=PGSC0003DMT400012522.v4.03 annot-version=v4.03
Sequence

ATGGCGGCTTCTTGCATGCTCAGATCCTCTTTCCTCTCTCCTAACCCTCATCTTCATCAA
CAATCCCCTGCTAAATCTAACCGTGCTTCCTTCTTCACTCCTATCAAAGCCACATCTTCT
TCAGACGATGCAAACTCCAAATCTCCACAACTTCAGAAGCACCGCCGCCCTGCTGACGAG
AATATCCGTGAGGAAGCCCGACGCGACATCTCTTCCCACAATTTCTCTGCTAGGTATGTA
CCTTTTAATGCCGATCCTAACTCCAGCGAGTGGTATCCTCTCGATGAGATTATTTATCGC
AGCCGATCCGGTGGCTTACTTGATGTCCAACACGATATGGACGCCCTAAAGAAATTTGAC
GGCCAGTATTGGCGGTCCCTGTTTGATTCCAGGGTGGGCAAGACAACATGGCCTTATGGT
TCAGGTGTTTGGTCCAAGAAAGAATGGGTCCTGCCTGAAATTGACAGTGATGATATTATC
AGTGCTTTTGAAGGAAATTCCAATCTTTTCTGGGCTGAGCGTTACGGCAAACAATTCCTA
GGCATGAGTGATTTGTGGGTCAAACATTGTGGAATCAGCCACACCGGTAGCTTCAAGGAT
CTTGGCATGACCGTATTGGTGAGTCAAGTAAATCGGTTGCGGAAAATGCATAAACCAGTT
GTGGGTGTTGGATGTGCTTCCACTGGAGACACGTCCGCTGCGCTGTCGGCTTACTGTGCA
TCTGCAGGCATTCCATCAATTGTGTTTTTACCTGCAAATAAGATATCTATGGCACAACTG
GTTCAACCAATAGCCAATGGGGCCTTTGTGTTGAGTATCGACACTGATTTTGATGGTTGT
ATGCAGTTGATTCGCGAAGTCACAGCTGAGTTGCCAATTTACTTGGCTAATTCCTTGAAT
AGTTTGAGGCTAGAAGGACAAAAGACGGCAGCAATAGAGATTCTGCAGCAGTTTGAATGG
GAAGTTCCAGACTGGGTGATAGTTCCGGGTGGTAACCTGGGCAATATATATGCATTTTAC
AAAGGTTTCCACATGTGCAAGGAGCTGGGGCTTGTTGATCGTATCCCAAGACTTGTTTGT
GCTCAAGCAGCCAATGCAAATCCACTTTACGTGCATTATAAGTCTGGTTGGAAAGATTTC
AAACCTGTCAAGGCAAATACAACATTTGCATCTGCTATACAGATTGGTGACCCAGTATCT
ATTGATAGGGCTGTCTTTGCTCTAAAGAAGTCCAATGGGATAGTGGAGGAGGCAACTGAG
GAAGAGTTGATGGATGCGATGGCTCAGGCTGATTCAACTGGGATGTTTATATGCCCCCAC
ACTGGTGTGGCATTGACTGCACTCTCCAAGCTGAGAAAGGCTGGAGTTATTGCGCCTACT
GATAGGACAGTGGTTGTGAGTACAGCTCATGGATTGAAGTTTACTCAATCCAAGGTTGAT
TATCATTCAAAAGAAATAAAGAACATGGAGTGTCGGTTTGCTAATCCCCCAGTACAAGTG
AAAGCAGACTTTGGATCCGTCATGGATGTTCTGAAGAAGTATTTGTTGAGCAAAAATTCC
AAGTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008694
PEP Infomation

pacid=37450989 transcript=PGSC0003DMT400012522 locus=PGSC0003DMG400004886 ID=PGSC0003DMT400012522.v4.03 annot-version=v4.03
Sequence

MAASCMLRSSFLSPNPHLHQQSPAKSNRASFFTPIKATSSSDDANSKSPQLQKHRRPADE
NIREEARRDISSHNFSARYVPFNADPNSSEWYPLDEIIYRSRSGGLLDVQHDMDALKKFD
GQYWRSLFDSRVGKTTWPYGSGVWSKKEWVLPEIDSDDIISAFEGNSNLFWAERYGKQFL
GMSDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMHKPVVGVGCASTGDTSAALSAYCA
SAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGCMQLIREVTAELPIYLANSLN
SLRLEGQKTAAIEILQQFEWEVPDWVIVPGGNLGNIYAFYKGFHMCKELGLVDRIPRLVC
AQAANANPLYVHYKSGWKDFKPVKANTTFASAIQIGDPVSIDRAVFALKKSNGIVEEATE
EELMDAMAQADSTGMFICPHTGVALTALSKLRKAGVIAPTDRTVVVSTAHGLKFTQSKVD
YHSKEIKNMECRFANPPVQVKADFGSVMDVLKKYLLSKNSKF*

Transcript Sequence

Transcript ID

PGSC0003DMT400012522
Transcript Infomation

pacid=37450989 locus=PGSC0003DMG400004886 ID=PGSC0003DMT400012522.v4.03 annot-version=v4.03
Sequence

ATGGCGGCTTCTTGCATGCTCAGATCCTCTTTCCTCTCTCCTAACCCTCATCTTCATCAA
CAATCCCCTGCTAAATCTAACCGTGCTTCCTTCTTCACTCCTATCAAAGCCACATCTTCT
TCAGACGATGCAAACTCCAAATCTCCACAACTTCAGAAGCACCGCCGCCCTGCTGACGAG
AATATCCGTGAGGAAGCCCGACGCGACATCTCTTCCCACAATTTCTCTGCTAGGTATGTA
CCTTTTAATGCCGATCCTAACTCCAGCGAGTGGTATCCTCTCGATGAGATTATTTATCGC
AGCCGATCCGGTGGCTTACTTGATGTCCAACACGATATGGACGCCCTAAAGAAATTTGAC
GGCCAGTATTGGCGGTCCCTGTTTGATTCCAGGGTGGGCAAGACAACATGGCCTTATGGT
TCAGGTGTTTGGTCCAAGAAAGAATGGGTCCTGCCTGAAATTGACAGTGATGATATTATC
AGTGCTTTTGAAGGAAATTCCAATCTTTTCTGGGCTGAGCGTTACGGCAAACAATTCCTA
GGCATGAGTGATTTGTGGGTCAAACATTGTGGAATCAGCCACACCGGTAGCTTCAAGGAT
CTTGGCATGACCGTATTGGTGAGTCAAGTAAATCGGTTGCGGAAAATGCATAAACCAGTT
GTGGGTGTTGGATGTGCTTCCACTGGAGACACGTCCGCTGCGCTGTCGGCTTACTGTGCA
TCTGCAGGCATTCCATCAATTGTGTTTTTACCTGCAAATAAGATATCTATGGCACAACTG
GTTCAACCAATAGCCAATGGGGCCTTTGTGTTGAGTATCGACACTGATTTTGATGGTTGT
ATGCAGTTGATTCGCGAAGTCACAGCTGAGTTGCCAATTTACTTGGCTAATTCCTTGAAT
AGTTTGAGGCTAGAAGGACAAAAGACGGCAGCAATAGAGATTCTGCAGCAGTTTGAATGG
GAAGTTCCAGACTGGGTGATAGTTCCGGGTGGTAACCTGGGCAATATATATGCATTTTAC
AAAGGTTTCCACATGTGCAAGGAGCTGGGGCTTGTTGATCGTATCCCAAGACTTGTTTGT
GCTCAAGCAGCCAATGCAAATCCACTTTACGTGCATTATAAGTCTGGTTGGAAAGATTTC
AAACCTGTCAAGGCAAATACAACATTTGCATCTGCTATACAGATTGGTGACCCAGTATCT
ATTGATAGGGCTGTCTTTGCTCTAAAGAAGTCCAATGGGATAGTGGAGGAGGCAACTGAG
GAAGAGTTGATGGATGCGATGGCTCAGGCTGATTCAACTGGGATGTTTATATGCCCCCAC
ACTGGTGTGGCATTGACTGCACTCTCCAAGCTGAGAAAGGCTGGAGTTATTGCGCCTACT
GATAGGACAGTGGTTGTGAGTACAGCTCATGGATTGAAGTTTACTCAATCCAAGGTTGAT
TATCATTCAAAAGAAATAAAGAACATGGAGTGTCGGTTTGCTAATCCCCCAGTACAAGTG
AAAGCAGACTTTGGATCCGTCATGGATGTTCTGAAGAAGTATTTGTTGAGCAAAAATTCC
AAGTTCTAA