Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012486
CDS Infomation

pacid=37450927 polypeptide=PGSC0003DMP400008671 locus=PGSC0003DMG400004874 ID=PGSC0003DMT400012486.v4.03 annot-version=v4.03
Sequence

ATGGCTAATGCGGCTGTGATTTCTCTGGTACGATCTTTGGAGGAATTGGTGCAGCGAAAA
CCACATTTGATAAGTGATGAAACAAGAAGAATGGTGGATTCTGTCCTTGATAGTCTTGAA
TATTTCCAAGACTTTCTTGAGAGCACTAGCAAGAGAAGGCAAAAATATTGTAGAAAGGTT
GAAGAGTTGGAGAGAGAGATTAGAATGGAAGTCGAAAAAGCAGAAGATGTGATTGAACTA
AAGATCATGTATGGGATAATGAAAAAAGAGGGATTATCCAAGACTTTCTTGAGAACACTT
GTAGGAAAGATTGATGCACCAAGGGAAAGAAAGGCAATACGCAAAACGTTGCTACCATTT
GTAAAAAAGATTGATGCTGTGAAGAGTAATGTGATGGGAAGTAGTTTTGGTACAAATCAA
GTTCAAGGCTATGATGATTCTACAAATGAGGATTTGTTGCCTGGTCTTTCATCGAGAAAT
GTTGCAAAACTGAATCCAGAAAATATTGTCGTGGGTCTTGAAGATGACCTCGTGAGAATA
ATCAGAAGACTAAAAGGGCCAACGTTAACTCGAGAGATTATCCCCATTTTAGGAATGGGG
GGAATAGGAAAAACCACTCTTGCTAGAAAGGCTTTTGATGATTTTGAAACTAGGCATCGC
TTTGACATCCGTATTTGGGTGACCGTATCTCAAGAGTATCGGATAAAAGGTATGCTGTTG
GACATTCTTCGTTGTACTTCAGATGAGACCAATGAAAAGTCTAATGATCGGTTGATGGAT
ATGATATACAAGAAGTTAAAGGGTTGGAGATATCTTGTTGTAATGGATGATATTTGGAGT
AATGATGTCTGGGATCTTATGACAAGAACTTTTCCAGATGATAACAATGGGAGCCGAATT
ATTTTGACTAGTAGGCAAGAAGAGGTTGCTAATCATGCAGATCCTCATAGCAATCCTCAT
AAAATGAACCTCTTAAATTCAGATAATAGTTGGAAGTTACTTCGTGACAAAGTGTTTGGG
GTAGAACATGCATGTCCTCCTGAATTGGAGGATATTGGAGAACAAGTAGCACAAAGATGC
CAAGGACTGCCCTTAGCTCTTCTAGTGGTAGCGGGACATCTCTCTAAAATTTCTAGAACA
CAAGAAAGTTGGAAAGATGTTGCCAAAAGTGTAAGTAAAGTTGTTGCTGATGAATCAGAT
ATATGTCTAGGAGTGCTTTCTATGAGTTACAATTACTTACCTGATCATCTTAAACCATGT
TTCCTTTACATGGGAGTCTTTCCCGAAGACAGTGTTGTTAACATTGTTAGATTGATCAAC
TTATGGATTTCTGAGGGTTTTATATCAGATGAATTAGAGGGAAGAGATTGTTTGGAGGAT
CTTGTTAGCAGGAATCTGGTAATGGTTAGAAACAGGAGTTTTAATGGCGAGGCAAAAACA
TGTGGTGTCCATGATCTGATTCGTGATTTGATTTTAAGAGAAGCCGAGAAAGAGAAGTTC
CTAGAGGTTACTAGAATTCATGAAGCCGCTAATCCTTCGGCAGAGAAGCTTAGAAGTGCT
CGTCGCTATTGTTTCCATTCATGCGATCAGACTGTTTTTTGGAAGCTATCCAGTATCATC
CGAACATTGCACTTCTTCGATGGATTTCAAAAACTTTCTAAACAAGTTCCTCTTTTGGTG
TCCTTCAAATTGCTAAGAGTGTTGGCAATCCTAAATGTAACATTTCAAACATTCCCACTT
GAGATAACAAAATTAGTACAACTCAGATACCTTCAATTCACTTGTTATGATGATATTCAC
TGGTCAGTGTCAAAGCTTCATAATCTGCAGACATTCATTCTTGGTTACGGAGTTGCAGGT
TTATTACCTCCAACCATACCTGCGGGAATTTGGCAAATGAGCAACCTAAGGCATCTTCAT
ATCGGCGACTTCTTTTCTTTCCCTATTCCATCGAACAAGCTACAAAATTTACAGGAACTC
TCCCGTCTAGCTTTGACTAGCTGCACTTCTGAATTATTTTCTGCTATTCCCAATCTTAAA
AAGCTGAAAATTATTGGAAATTATCTGATGGAAATGAAGAGAGAGCGCCTAAATAGCCTT
TCCTGTTTAAAAAAACTTGAAATCTTGAAGTACAGGGATGACGGGATACAACCTTCCCAA
ATCCCAAGTAAGTATGTTTTGCCTGCATCACTGAAGAGGTTGACTTTAAGTTGCACTAGT
TTACCATGGAAAGACATGGCAAATGTTATAACATTACCAAACCTCGAGGTGCTTAAAATT
AAAGACAACGGATTTCTTGGTGATGAATGGATGTTAAACGATGAAGAGATTTTCAAGCAA
CTTAAGTTCCTCCTAATCAGTTGGACAGGTCTGAAGCACTGGAAAGCTGGTAGTGTTAAC
TTCCCAAAGCTGCAACGCCTATTTCTGAAAAGATGCATGAACCTGGAGAAAATCCCTCAA
GACTTTGGGGAAATATGTACCTTGGAGTCAATAGAGTTGCATAAATGCAGTATATCTGCA
GCTAAATCCGGCAAAGACATTCAAGAAGAACAGGAGAGCATGGGGAATGAATGCCTTAGT
GTCCTCATCTATAATCATCCGTCATCTTCAGCTCAGCATATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008671
PEP Infomation

pacid=37450927 transcript=PGSC0003DMT400012486 locus=PGSC0003DMG400004874 ID=PGSC0003DMT400012486.v4.03 annot-version=v4.03
Sequence

MANAAVISLVRSLEELVQRKPHLISDETRRMVDSVLDSLEYFQDFLESTSKRRQKYCRKV
EELEREIRMEVEKAEDVIELKIMYGIMKKEGLSKTFLRTLVGKIDAPRERKAIRKTLLPF
VKKIDAVKSNVMGSSFGTNQVQGYDDSTNEDLLPGLSSRNVAKLNPENIVVGLEDDLVRI
IRRLKGPTLTREIIPILGMGGIGKTTLARKAFDDFETRHRFDIRIWVTVSQEYRIKGMLL
DILRCTSDETNEKSNDRLMDMIYKKLKGWRYLVVMDDIWSNDVWDLMTRTFPDDNNGSRI
ILTSRQEEVANHADPHSNPHKMNLLNSDNSWKLLRDKVFGVEHACPPELEDIGEQVAQRC
QGLPLALLVVAGHLSKISRTQESWKDVAKSVSKVVADESDICLGVLSMSYNYLPDHLKPC
FLYMGVFPEDSVVNIVRLINLWISEGFISDELEGRDCLEDLVSRNLVMVRNRSFNGEAKT
CGVHDLIRDLILREAEKEKFLEVTRIHEAANPSAEKLRSARRYCFHSCDQTVFWKLSSII
RTLHFFDGFQKLSKQVPLLVSFKLLRVLAILNVTFQTFPLEITKLVQLRYLQFTCYDDIH
WSVSKLHNLQTFILGYGVAGLLPPTIPAGIWQMSNLRHLHIGDFFSFPIPSNKLQNLQEL
SRLALTSCTSELFSAIPNLKKLKIIGNYLMEMKRERLNSLSCLKKLEILKYRDDGIQPSQ
IPSKYVLPASLKRLTLSCTSLPWKDMANVITLPNLEVLKIKDNGFLGDEWMLNDEEIFKQ
LKFLLISWTGLKHWKAGSVNFPKLQRLFLKRCMNLEKIPQDFGEICTLESIELHKCSISA
AKSGKDIQEEQESMGNECLSVLIYNHPSSSAQHI*

Transcript Sequence

Transcript ID

PGSC0003DMT400012486
Transcript Infomation

pacid=37450927 locus=PGSC0003DMG400004874 ID=PGSC0003DMT400012486.v4.03 annot-version=v4.03
Sequence

ATGGCTAATGCGGCTGTGATTTCTCTGGTACGATCTTTGGAGGAATTGGTGCAGCGAAAA
CCACATTTGATAAGTGATGAAACAAGAAGAATGGTGGATTCTGTCCTTGATAGTCTTGAA
TATTTCCAAGACTTTCTTGAGAGCACTAGCAAGAGAAGGCAAAAATATTGTAGAAAGGTT
GAAGAGTTGGAGAGAGAGATTAGAATGGAAGTCGAAAAAGCAGAAGATGTGATTGAACTA
AAGATCATGTATGGGATAATGAAAAAAGAGGGATTATCCAAGACTTTCTTGAGAACACTT
GTAGGAAAGATTGATGCACCAAGGGAAAGAAAGGCAATACGCAAAACGTTGCTACCATTT
GTAAAAAAGATTGATGCTGTGAAGAGTAATGTGATGGGAAGTAGTTTTGGTACAAATCAA
GTTCAAGGCTATGATGATTCTACAAATGAGGATTTGTTGCCTGGTCTTTCATCGAGAAAT
GTTGCAAAACTGAATCCAGAAAATATTGTCGTGGGTCTTGAAGATGACCTCGTGAGAATA
ATCAGAAGACTAAAAGGGCCAACGTTAACTCGAGAGATTATCCCCATTTTAGGAATGGGG
GGAATAGGAAAAACCACTCTTGCTAGAAAGGCTTTTGATGATTTTGAAACTAGGCATCGC
TTTGACATCCGTATTTGGGTGACCGTATCTCAAGAGTATCGGATAAAAGGTATGCTGTTG
GACATTCTTCGTTGTACTTCAGATGAGACCAATGAAAAGTCTAATGATCGGTTGATGGAT
ATGATATACAAGAAGTTAAAGGGTTGGAGATATCTTGTTGTAATGGATGATATTTGGAGT
AATGATGTCTGGGATCTTATGACAAGAACTTTTCCAGATGATAACAATGGGAGCCGAATT
ATTTTGACTAGTAGGCAAGAAGAGGTTGCTAATCATGCAGATCCTCATAGCAATCCTCAT
AAAATGAACCTCTTAAATTCAGATAATAGTTGGAAGTTACTTCGTGACAAAGTGTTTGGG
GTAGAACATGCATGTCCTCCTGAATTGGAGGATATTGGAGAACAAGTAGCACAAAGATGC
CAAGGACTGCCCTTAGCTCTTCTAGTGGTAGCGGGACATCTCTCTAAAATTTCTAGAACA
CAAGAAAGTTGGAAAGATGTTGCCAAAAGTGTAAGTAAAGTTGTTGCTGATGAATCAGAT
ATATGTCTAGGAGTGCTTTCTATGAGTTACAATTACTTACCTGATCATCTTAAACCATGT
TTCCTTTACATGGGAGTCTTTCCCGAAGACAGTGTTGTTAACATTGTTAGATTGATCAAC
TTATGGATTTCTGAGGGTTTTATATCAGATGAATTAGAGGGAAGAGATTGTTTGGAGGAT
CTTGTTAGCAGGAATCTGGTAATGGTTAGAAACAGGAGTTTTAATGGCGAGGCAAAAACA
TGTGGTGTCCATGATCTGATTCGTGATTTGATTTTAAGAGAAGCCGAGAAAGAGAAGTTC
CTAGAGGTTACTAGAATTCATGAAGCCGCTAATCCTTCGGCAGAGAAGCTTAGAAGTGCT
CGTCGCTATTGTTTCCATTCATGCGATCAGACTGTTTTTTGGAAGCTATCCAGTATCATC
CGAACATTGCACTTCTTCGATGGATTTCAAAAACTTTCTAAACAAGTTCCTCTTTTGGTG
TCCTTCAAATTGCTAAGAGTGTTGGCAATCCTAAATGTAACATTTCAAACATTCCCACTT
GAGATAACAAAATTAGTACAACTCAGATACCTTCAATTCACTTGTTATGATGATATTCAC
TGGTCAGTGTCAAAGCTTCATAATCTGCAGACATTCATTCTTGGTTACGGAGTTGCAGGT
TTATTACCTCCAACCATACCTGCGGGAATTTGGCAAATGAGCAACCTAAGGCATCTTCAT
ATCGGCGACTTCTTTTCTTTCCCTATTCCATCGAACAAGCTACAAAATTTACAGGAACTC
TCCCGTCTAGCTTTGACTAGCTGCACTTCTGAATTATTTTCTGCTATTCCCAATCTTAAA
AAGCTGAAAATTATTGGAAATTATCTGATGGAAATGAAGAGAGAGCGCCTAAATAGCCTT
TCCTGTTTAAAAAAACTTGAAATCTTGAAGTACAGGGATGACGGGATACAACCTTCCCAA
ATCCCAAGTAAGTATGTTTTGCCTGCATCACTGAAGAGGTTGACTTTAAGTTGCACTAGT
TTACCATGGAAAGACATGGCAAATGTTATAACATTACCAAACCTCGAGGTGCTTAAAATT
AAAGACAACGGATTTCTTGGTGATGAATGGATGTTAAACGATGAAGAGATTTTCAAGCAA
CTTAAGTTCCTCCTAATCAGTTGGACAGGTCTGAAGCACTGGAAAGCTGGTAGTGTTAAC
TTCCCAAAGCTGCAACGCCTATTTCTGAAAAGATGCATGAACCTGGAGAAAATCCCTCAA
GACTTTGGGGAAATATGTACCTTGGAGTCAATAGAGTTGCATAAATGCAGTATATCTGCA
GCTAAATCCGGCAAAGACATTCAAGAAGAACAGGAGAGCATGGGGAATGAATGCCTTAGT
GTCCTCATCTATAATCATCCGTCATCTTCAGCTCAGCATATTTGA