Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012477
CDS Infomation

pacid=37451549 polypeptide=PGSC0003DMP400008668 locus=PGSC0003DMG400004872 ID=PGSC0003DMT400012477.v4.03 annot-version=v4.03
Sequence

ATGACTATACTCATTGAGCAGCTTCCTGTTGAGATCCAGGCAGATGAAACGAATATTCAT
CAAAAGGAATTGGTATTGGTTGATGGATTTGCAGTTCCTCAAACCAATGCATTTGGCCAT
AATTTTAGGGACTACACTGTTGAAAGTGCAAGGCAACAAGGGGTAGAATTTTTTTACAAG
ATCAATCACTTTAATCAAACCTATGATTATGTAAGTAAAATGAGGGTTGATTATGCAAAA
TTGGACAAGGCAGAAATGAGCATCTGGGAATGCTGTGAACTATTGAATGATGTGGTTGAT
GACAGTGACCCTGATTTGGATGAACCTCAAATTCAACACTTGTTGCAAAGTGCTGAAGCC
ATTAGGAAAGACTATCCTAATGAAGATTGGCTCCATTTGACTGCCCTTATTCATGATTTG
GGGAAAGTGCTTCTTCTTCCTAGCTTTGGAGAGCTTCCTCAATGGGCTGTTGTTGGTGAC
ACATTCCCTGTTGGCTGTGCTTTCCATGACTCAATTGTTCACTCCAAGTACTTTAAGGAA
AATCCTGACTACAATAATCCTGCTTACAACAGCAAATTTGGAGTTTACTCTGAGGGTTGT
GGATTAGACAAGGTGTTGATGTCATGGGGTCACGATGATTATATGTACTTGGTTGCAAAA
GAGAATGGGACAACGTTGCCATCAGCTGGTCTTTTCATCATTAGATATCATTCATTTTAT
GCCTTGCATAAGTCTGGAGCTTACAAGGAACTAATGAATGAGGAAGATAAGGAAAATCTT
AAGTGGCTTCATATTTTTAACAAATATGACTTGTACAGCAAAAGCAAAGTTCAGGTTAAC
GTGGAAGAGGTCAAGCCTTACTACATGTCTCTAATTGAAAAGTATTTCCCAGCAAAGCTG
AAATGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008668
PEP Infomation

pacid=37451549 transcript=PGSC0003DMT400012477 locus=PGSC0003DMG400004872 ID=PGSC0003DMT400012477.v4.03 annot-version=v4.03
Sequence

MTILIEQLPVEIQADETNIHQKELVLVDGFAVPQTNAFGHNFRDYTVESARQQGVEFFYK
INHFNQTYDYVSKMRVDYAKLDKAEMSIWECCELLNDVVDDSDPDLDEPQIQHLLQSAEA
IRKDYPNEDWLHLTALIHDLGKVLLLPSFGELPQWAVVGDTFPVGCAFHDSIVHSKYFKE
NPDYNNPAYNSKFGVYSEGCGLDKVLMSWGHDDYMYLVAKENGTTLPSAGLFIIRYHSFY
ALHKSGAYKELMNEEDKENLKWLHIFNKYDLYSKSKVQVNVEEVKPYYMSLIEKYFPAKL
KW*

Transcript Sequence

Transcript ID

PGSC0003DMT400012477
Transcript Infomation

pacid=37451549 locus=PGSC0003DMG400004872 ID=PGSC0003DMT400012477.v4.03 annot-version=v4.03
Sequence

ATGACTATACTCATTGAGCAGCTTCCTGTTGAGATCCAGGCAGATGAAACGAATATTCAT
CAAAAGGAATTGGTATTGGTTGATGGATTTGCAGTTCCTCAAACCAATGCATTTGGCCAT
AATTTTAGGGACTACACTGTTGAAAGTGCAAGGCAACAAGGGGTAGAATTTTTTTACAAG
ATCAATCACTTTAATCAAACCTATGATTATGTAAGTAAAATGAGGGTTGATTATGCAAAA
TTGGACAAGGCAGAAATGAGCATCTGGGAATGCTGTGAACTATTGAATGATGTGGTTGAT
GACAGTGACCCTGATTTGGATGAACCTCAAATTCAACACTTGTTGCAAAGTGCTGAAGCC
ATTAGGAAAGACTATCCTAATGAAGATTGGCTCCATTTGACTGCCCTTATTCATGATTTG
GGGAAAGTGCTTCTTCTTCCTAGCTTTGGAGAGCTTCCTCAATGGGCTGTTGTTGGTGAC
ACATTCCCTGTTGGCTGTGCTTTCCATGACTCAATTGTTCACTCCAAGTACTTTAAGGAA
AATCCTGACTACAATAATCCTGCTTACAACAGCAAATTTGGAGTTTACTCTGAGGGTTGT
GGATTAGACAAGGTGTTGATGTCATGGGGTCACGATGATTATATGTACTTGGTTGCAAAA
GAGAATGGGACAACGTTGCCATCAGCTGGTCTTTTCATCATTAGATATCATTCATTTTAT
GCCTTGCATAAGTCTGGAGCTTACAAGGAACTAATGAATGAGGAAGATAAGGAAAATCTT
AAGTGGCTTCATATTTTTAACAAATATGACTTGTACAGCAAAAGCAAAGTTCAGGTTAAC
GTGGAAGAGGTCAAGCCTTACTACATGTCTCTAATTGAAAAGTATTTCCCAGCAAAGCTG
AAATGGTAA