Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012413
CDS Infomation

pacid=37449716 polypeptide=PGSC0003DMP400008626 locus=PGSC0003DMG400004860 ID=PGSC0003DMT400012413.v4.03 annot-version=v4.03
Sequence

ATGGTTACTTGTGGAATTGACTGGAAATCTGTTCTGCCTAATTGTTTTAAGGGCAATAAT
GTTCGTTCGGAGGCGAAGGTGATGGAGAACAGTAAACAGATGAATTCTGATCATCATAGG
TTAGCTTTTTCAGATATAAGTACTGATTCTAGATCAGTACTTATATCGTTGGATGATCTC
TCATCGAACGCGGTTATTGGTTCAAATCTTCATGTATTCACATATGAGGAGCTTAAACTC
ATCACTAGTGATTTCTCCCCTGCTAATTTTCTCGGTAAAGGTGGATTTGGACCCGTTCAC
AAGGGGTTCATTGATGATAAGATTAAGCCTGGTTTGGATGCTCAACCTGTTGCTGTTAAA
TTGCTTGATTTGGATGGAAATCAGGGCCATCAAGAATGGCTGACTGAAGTGGTCTTTTTG
GGGCAATTGAGGCATCACCATCTAGTGAAGTTGATTGGATATTGTTGGGAGGAGGAGCAG
AGACTTCTCGTTTACGAGTATATGGCAAGGGGAAACCTTGAGGATCAACTATTTTCGAGA
TATTCGAGTTGTTTGCCATGGTTGACCAGAATAAAAATTATGGTTGGTGCTGCAAAGGGA
CTGGCTTTTCTTCACGGAGAAGAAAAGCCAGTAATCTACCGTGATTTTAAGGCTTCTAAC
ATCCTCTTAGACTCGGATTACAGGGCCAAACTATCTGATTTCGGGCTAGCAAAGGATGGA
CCAGAAGGCGATGACACACATGTCTCGACTCGTGTGATGGGCACTCATGGCTACGCTGCT
CCAGAGTACATCATGACTGGTCATTTGACAAGCAAGAGCGATGTGTACAGCTTCGGAGTA
GTTTTGTTAGAACTAATAACAGGACGACAAGCCATGGACAAGAAACGCCCCCTCAAAGAG
CGAATCCTGGTGGATTGGGCAAGACCAATGTTAAGGGATCCACACAAACTTGACAGAATA
ATGGACCCACGACTTGAAGGTCAGTACTCGACACAAGGAGCAAAGAAGGTTGCTGCATTG
GCTTATCAATGCTTAAGCCACCAGCCAAGGTCTAGGCCCACTATGAGCAACATAGTGAAG
ATCTTGGAGCCAGTCTTGGACATGAAGGATATACCAATGGGCCCATTTGTTTACGTCGTC
CCCTCCTCAAAACCTGACAAGGGAACGGAAATTGGTGAATTGAAGAGTAAAGTGGACGAT
GAAAACAAGGCGAATGTAAGGGAAAAAGAAGTAGGAAATGCAGGGGAAAACAGAGAGGAT
GGTAATGCTAAGCAACGGAGAGCCGGACACAGGCATAAACACAGGCTAAAGACTGATGCT
TCTGTTTACTCAGATACTCATTTGTATCAAAAGACTGTAAGGCACGAAAGAACAAACAAA
TTAAATTCTTGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008626
PEP Infomation

pacid=37449716 transcript=PGSC0003DMT400012413 locus=PGSC0003DMG400004860 ID=PGSC0003DMT400012413.v4.03 annot-version=v4.03
Sequence

MVTCGIDWKSVLPNCFKGNNVRSEAKVMENSKQMNSDHHRLAFSDISTDSRSVLISLDDL
SSNAVIGSNLHVFTYEELKLITSDFSPANFLGKGGFGPVHKGFIDDKIKPGLDAQPVAVK
LLDLDGNQGHQEWLTEVVFLGQLRHHHLVKLIGYCWEEEQRLLVYEYMARGNLEDQLFSR
YSSCLPWLTRIKIMVGAAKGLAFLHGEEKPVIYRDFKASNILLDSDYRAKLSDFGLAKDG
PEGDDTHVSTRVMGTHGYAAPEYIMTGHLTSKSDVYSFGVVLLELITGRQAMDKKRPLKE
RILVDWARPMLRDPHKLDRIMDPRLEGQYSTQGAKKVAALAYQCLSHQPRSRPTMSNIVK
ILEPVLDMKDIPMGPFVYVVPSSKPDKGTEIGELKSKVDDENKANVREKEVGNAGENRED
GNAKQRRAGHRHKHRLKTDASVYSDTHLYQKTVRHERTNKLNSC*

Transcript Sequence

Transcript ID

PGSC0003DMT400012413
Transcript Infomation

pacid=37449716 locus=PGSC0003DMG400004860 ID=PGSC0003DMT400012413.v4.03 annot-version=v4.03
Sequence

ATGGTTACTTGTGGAATTGACTGGAAATCTGTTCTGCCTAATTGTTTTAAGGGCAATAAT
GTTCGTTCGGAGGCGAAGGTGATGGAGAACAGTAAACAGATGAATTCTGATCATCATAGG
TTAGCTTTTTCAGATATAAGTACTGATTCTAGATCAGTACTTATATCGTTGGATGATCTC
TCATCGAACGCGGTTATTGGTTCAAATCTTCATGTATTCACATATGAGGAGCTTAAACTC
ATCACTAGTGATTTCTCCCCTGCTAATTTTCTCGGTAAAGGTGGATTTGGACCCGTTCAC
AAGGGGTTCATTGATGATAAGATTAAGCCTGGTTTGGATGCTCAACCTGTTGCTGTTAAA
TTGCTTGATTTGGATGGAAATCAGGGCCATCAAGAATGGCTGACTGAAGTGGTCTTTTTG
GGGCAATTGAGGCATCACCATCTAGTGAAGTTGATTGGATATTGTTGGGAGGAGGAGCAG
AGACTTCTCGTTTACGAGTATATGGCAAGGGGAAACCTTGAGGATCAACTATTTTCGAGA
TATTCGAGTTGTTTGCCATGGTTGACCAGAATAAAAATTATGGTTGGTGCTGCAAAGGGA
CTGGCTTTTCTTCACGGAGAAGAAAAGCCAGTAATCTACCGTGATTTTAAGGCTTCTAAC
ATCCTCTTAGACTCGGATTACAGGGCCAAACTATCTGATTTCGGGCTAGCAAAGGATGGA
CCAGAAGGCGATGACACACATGTCTCGACTCGTGTGATGGGCACTCATGGCTACGCTGCT
CCAGAGTACATCATGACTGGTCATTTGACAAGCAAGAGCGATGTGTACAGCTTCGGAGTA
GTTTTGTTAGAACTAATAACAGGACGACAAGCCATGGACAAGAAACGCCCCCTCAAAGAG
CGAATCCTGGTGGATTGGGCAAGACCAATGTTAAGGGATCCACACAAACTTGACAGAATA
ATGGACCCACGACTTGAAGGTCAGTACTCGACACAAGGAGCAAAGAAGGTTGCTGCATTG
GCTTATCAATGCTTAAGCCACCAGCCAAGGTCTAGGCCCACTATGAGCAACATAGTGAAG
ATCTTGGAGCCAGTCTTGGACATGAAGGATATACCAATGGGCCCATTTGTTTACGTCGTC
CCCTCCTCAAAACCTGACAAGGGAACGGAAATTGGTGAATTGAAGAGTAAAGTGGACGAT
GAAAACAAGGCGAATGTAAGGGAAAAAGAAGTAGGAAATGCAGGGGAAAACAGAGAGGAT
GGTAATGCTAAGCAACGGAGAGCCGGACACAGGCATAAACACAGGCTAAAGACTGATGCT
TCTGTTTACTCAGATACTCATTTGTATCAAAAGACTGTAAGGCACGAAAGAACAAACAAA
TTAAATTCTTGTTGA