Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012383
CDS Infomation

pacid=37453485 polypeptide=PGSC0003DMP400008608 locus=PGSC0003DMG400004853 ID=PGSC0003DMT400012383.v4.03 annot-version=v4.03
Sequence

ATGGCACGAGGTAGCAGCAAAAGGGCAAAGATCCAATGGAGCAATCTCTATACATTTGGT
TGCTATCGTCCACGAACTGATGAGGAAGAGGGCCCCCATCGGCTAGGGGCTGGGTTTTCT
AGAGTAGTTCATTGCAACCAGTCCCATCTCCATGAAAAGAAACCTTTTAAGTACCGCACA
AACTACATATCTACCACTAAGTATAATTTCATCACATTTCTACCCAAGGCTATATTTGAG
CAATTCAGACGTGTTGCTAACTTGTATTTCCTCCTTGCGGCAATTCTGTCAGCCACAACA
AATCTTTCTCCATTCTCATCTGTCAGTATGATAGCTCCTTTGGTCTTTGTTGTTGGGTTG
AGCATGGCGAAGGAGGCATTGGAAGACTCGCGGCGGTTCATACAAGATATGAAGGTCAAT
CTGCGAAAAGCTCGTCTACGTAAGGAAGGTGGTGTGTTTGGTCTAAGGCCATGGATGAAG
ATTCGTGTCGGAGACATTGTGAAGGTGGAAAAGGACCAATTTTTTCCCGCTGATTTACTT
CTTCTATCATCGAGTTATCAAGATGGAATTTGTTATGTGGAAACTATGAACTTGGATGGG
GAGACAAACTTGAAGGTAAAAAGAGCTTTGGAGGTTACCCTACCATTGGATGATAATGAG
GCTTTCAAGGAATTCAGGGCTACCATAAAATGTGAAGATCCCAATCCTAACCTTTACACT
TTTGTGGGGAACCTTGAATATGATCGTCAAATTTATCCTCTTGATCCCACTCAGATTCTC
CTCAGGGATTCAAAGCTCAGGAACACGGCATATATCTATGGAGTTGTTATATTTACTGGT
CATGACAGCAAAGTTATGCAAAATTCTACAGAATCTCCCTCAAAAAGGAGTAGGATCGAA
CTTCAGATGGACAAGATAATTTACGTCCTCTTCACCCTCCTTGTCGTGATATCATTTATC
AGTTCCATCGGCTTTGCCGTAAAAACAAGATTGAACATGCCAAGCTGGTGGTATATGCAG
CCTATGGACAAGAAGAATAACACAACTGATCCAAACAAGCCTGAGTTGTCAGCCATTTTC
CATCTGATCACTGCACTAATATTATATGGCTATTTGATTCCTATTTCCCTCTATGTTTCT
ATTGAAGTAGTGAAGGTCCTACAGGCATTGTTCATAAACCAAGATATTAATATGTATGAT
GACGAGACAGGAACTCCTGCTCAAGCACGAACATCAAACTTAAATGAGGAGTTGGGGCAG
GTTGATACCATCCTCTCAGATAAAACTGGCACTTTGACATGCAACCAAATGGACTTCCTA
AAATGCTCCATTGCTGGTAGTGCATATGGGACACGGGCCAGTGATGTAGAACTTGCAGCG
GCAAAGCAGATGGCAGAGGACCTTGGTGGGCAAGACCCTGACATTTCACGGAGACGGTCA
TCAGAAATTGAACTAGAGAGGGTCGTCACTTCTAAAGATGAGATCAGGCCTGCAATAAAG
GGGTTCAGCTTTGAGGATAGCCGACTTATGAAGGGAAATTGGATGAAGGAACCAAATGCA
GATGTCATCTTGCTATTCTTTAGGATACTCTCACTTTGTCATACTGCTATTCCTGAGTTA
AATGAGGAGACTGGCAGCTATAATTTCGAAGCAGAGTCTCCTGATGAAGCAGCATTTCTT
GTTGCAGCTAGGGAATTTGGCTTTGAGTTCTGTAAAAGAACTCAATCAAGAGTTTATATA
CGTGAGAAGTATCCTTCTTTTCAAGAGCCCACTGAAAGGGAATTCAAAGTTCTCAATCTA
TTGGACTTCACCAGCAAGCGGAAGAGAATGTCTGTTATCATTCGAGATGAGAGCGGCCAG
ATTCTTCTATTGTGTAAAGGAGCAGACAGCATCATCTATGAGAGATTAGCTAAGAATGGA
AGGAGATTTGAGGAGGCTACCACAAAGCATTTGAATGAATATGGGGAAGCAGGGTTACGT
ACTCTCGTGCTTGCCTACAAAAAGCTGGATGAGACAGAGTACTCTGCGTGGAATGAAGAA
TTCACTAAAGCCAAAGCTTCAATCAGTGGTGATAGAGATGCCATGCTTGAATGTCTATCT
GATATGATGGAAAAGGAATTGATCCTTATTGGTGCTACGGCTGTTGAGGATAAACTACAG
AAGGGAGTTCCTCAGTGTATTGATAAACTGGCGCAAGCTGGTCTCAAGATCTGGGTTCTG
ACAGGTGACAAGATGGAAACAGCCATCAACATAGGGTACGCATGTAGTCTACTTCGGCAT
GGGATGAGACAAATATGCATAACGGCGATGAATGCAGACTCAGTGGAAAGAAGCTCTGAA
CAGGCTATAAGGGAGAACATTTTGATGCAAATCACAAATGCTTCTCAAATGATCAAGCTT
GAAAAGGACCCACATGCTGCATTTGCCTTGATTATTGATGGGAAAACTCTTACATATGCT
TTGGCGTATGATATGAAACATCATTTTTTGAATTTAGCAGTCAGCTGTGCATCTGTCATT
TGCTGTCGTGTCTCTCCTAAGCAGAAGGCCTTGGTTACTAGGTTAGTAAAGGAAGGAACT
GGAAAAACCACATTAGCAATTGGTGATGGTGCAAATGATGTTGGGATGATCCAAGAAGCG
GACATTGGAGTTGGCATTAGCGGTGCAGAAGGAATGCAGGCTGTGATGGCTAGTGACTTT
GCTATTGCACAGTTTCGGTTCTTGGAGAGACTTCTTGTTGTACACGGACATTGGTGCTAC
AAACGAATTGCTCAGATGATATGCTATTTCTTCTACAAAAATATAGCTTTTGGTCTCACA
CTCTTTTACTTCGAGGCTTTTGCGGGCTTTTCGGGCCAGTCTGTCTATGATGATTCATAC
ATGATTCTGTTCAATGTGATTCTTACCTCACTACCCGTGATCGCACTGGGAGTATTCGAG
CAGGATGTGCCTTCTGAAGTGTGCTTACAGTTTCCAGCACTGTACCAGCAAGGGCCCAAA
AACTTGTTCTTTGACTGGTATAGAATATTCGGTTGGCTTGGCAACGGTGTCTACACCTCT
CTCATTGTTTTCTTCCTCAACATTATCATCTTCTATGATCAAGCCTTCCAGGCTGAAGGC
CAGACTGCCGACCTGACTGCTATGGGCACTACGATGTTCACCTGCATTGTCTGGGCTGTC
AACTGTCAGATTGCACTCACAATGAGTCATTTCACATGGATACAACATATTTTCATCTGG
GGAAGTATTGCTAGTTGGTACCTGTTTCTTTTGATCTATGGTATGATAGCGCCAGATTAT
TCTAAATATGCCTTCAGAATCCTTGTGGAAGCTCTAGCTCCTGCTCCAGTCTACTGGTGT
ACCACCCTTTTAGTAATTGTTGTCTGCACCCTTCCCTACCTTGCGCACATATCTTACCAA
AGGTCGTTCAATCCGATGGATCATCACATTATTCAAGAAATCATATATTACAAGAAAGAC
GTTAAAGATCATCATATGTGGAAGAGAGAACGGTCTAAAGCAAGACAGAGTACAAACATC
GGGTTCACAGCAAGAGTAGATGCCAAAATTAGACAGTTGAGAGGGAGGCTTCACAAAAAG
TATACCTCAATGGGTTCCCAAATTGAATTAACACAACCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400008608
PEP Infomation

pacid=37453485 transcript=PGSC0003DMT400012383 locus=PGSC0003DMG400004853 ID=PGSC0003DMT400012383.v4.03 annot-version=v4.03
Sequence

MARGSSKRAKIQWSNLYTFGCYRPRTDEEEGPHRLGAGFSRVVHCNQSHLHEKKPFKYRT
NYISTTKYNFITFLPKAIFEQFRRVANLYFLLAAILSATTNLSPFSSVSMIAPLVFVVGL
SMAKEALEDSRRFIQDMKVNLRKARLRKEGGVFGLRPWMKIRVGDIVKVEKDQFFPADLL
LLSSSYQDGICYVETMNLDGETNLKVKRALEVTLPLDDNEAFKEFRATIKCEDPNPNLYT
FVGNLEYDRQIYPLDPTQILLRDSKLRNTAYIYGVVIFTGHDSKVMQNSTESPSKRSRIE
LQMDKIIYVLFTLLVVISFISSIGFAVKTRLNMPSWWYMQPMDKKNNTTDPNKPELSAIF
HLITALILYGYLIPISLYVSIEVVKVLQALFINQDINMYDDETGTPAQARTSNLNEELGQ
VDTILSDKTGTLTCNQMDFLKCSIAGSAYGTRASDVELAAAKQMAEDLGGQDPDISRRRS
SEIELERVVTSKDEIRPAIKGFSFEDSRLMKGNWMKEPNADVILLFFRILSLCHTAIPEL
NEETGSYNFEAESPDEAAFLVAAREFGFEFCKRTQSRVYIREKYPSFQEPTEREFKVLNL
LDFTSKRKRMSVIIRDESGQILLLCKGADSIIYERLAKNGRRFEEATTKHLNEYGEAGLR
TLVLAYKKLDETEYSAWNEEFTKAKASISGDRDAMLECLSDMMEKELILIGATAVEDKLQ
KGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRHGMRQICITAMNADSVERSSE
QAIRENILMQITNASQMIKLEKDPHAAFALIIDGKTLTYALAYDMKHHFLNLAVSCASVI
CCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGAEGMQAVMASDF
AIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFAGFSGQSVYDDSY
MILFNVILTSLPVIALGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRIFGWLGNGVYTS
LIVFFLNIIIFYDQAFQAEGQTADLTAMGTTMFTCIVWAVNCQIALTMSHFTWIQHIFIW
GSIASWYLFLLIYGMIAPDYSKYAFRILVEALAPAPVYWCTTLLVIVVCTLPYLAHISYQ
RSFNPMDHHIIQEIIYYKKDVKDHHMWKRERSKARQSTNIGFTARVDAKIRQLRGRLHKK
YTSMGSQIELTQP*

Transcript Sequence

Transcript ID

PGSC0003DMT400012383
Transcript Infomation

pacid=37453485 locus=PGSC0003DMG400004853 ID=PGSC0003DMT400012383.v4.03 annot-version=v4.03
Sequence

ATGGCACGAGGTAGCAGCAAAAGGGCAAAGATCCAATGGAGCAATCTCTATACATTTGGT
TGCTATCGTCCACGAACTGATGAGGAAGAGGGCCCCCATCGGCTAGGGGCTGGGTTTTCT
AGAGTAGTTCATTGCAACCAGTCCCATCTCCATGAAAAGAAACCTTTTAAGTACCGCACA
AACTACATATCTACCACTAAGTATAATTTCATCACATTTCTACCCAAGGCTATATTTGAG
CAATTCAGACGTGTTGCTAACTTGTATTTCCTCCTTGCGGCAATTCTGTCAGCCACAACA
AATCTTTCTCCATTCTCATCTGTCAGTATGATAGCTCCTTTGGTCTTTGTTGTTGGGTTG
AGCATGGCGAAGGAGGCATTGGAAGACTCGCGGCGGTTCATACAAGATATGAAGGTCAAT
CTGCGAAAAGCTCGTCTACGTAAGGAAGGTGGTGTGTTTGGTCTAAGGCCATGGATGAAG
ATTCGTGTCGGAGACATTGTGAAGGTGGAAAAGGACCAATTTTTTCCCGCTGATTTACTT
CTTCTATCATCGAGTTATCAAGATGGAATTTGTTATGTGGAAACTATGAACTTGGATGGG
GAGACAAACTTGAAGGTAAAAAGAGCTTTGGAGGTTACCCTACCATTGGATGATAATGAG
GCTTTCAAGGAATTCAGGGCTACCATAAAATGTGAAGATCCCAATCCTAACCTTTACACT
TTTGTGGGGAACCTTGAATATGATCGTCAAATTTATCCTCTTGATCCCACTCAGATTCTC
CTCAGGGATTCAAAGCTCAGGAACACGGCATATATCTATGGAGTTGTTATATTTACTGGT
CATGACAGCAAAGTTATGCAAAATTCTACAGAATCTCCCTCAAAAAGGAGTAGGATCGAA
CTTCAGATGGACAAGATAATTTACGTCCTCTTCACCCTCCTTGTCGTGATATCATTTATC
AGTTCCATCGGCTTTGCCGTAAAAACAAGATTGAACATGCCAAGCTGGTGGTATATGCAG
CCTATGGACAAGAAGAATAACACAACTGATCCAAACAAGCCTGAGTTGTCAGCCATTTTC
CATCTGATCACTGCACTAATATTATATGGCTATTTGATTCCTATTTCCCTCTATGTTTCT
ATTGAAGTAGTGAAGGTCCTACAGGCATTGTTCATAAACCAAGATATTAATATGTATGAT
GACGAGACAGGAACTCCTGCTCAAGCACGAACATCAAACTTAAATGAGGAGTTGGGGCAG
GTTGATACCATCCTCTCAGATAAAACTGGCACTTTGACATGCAACCAAATGGACTTCCTA
AAATGCTCCATTGCTGGTAGTGCATATGGGACACGGGCCAGTGATGTAGAACTTGCAGCG
GCAAAGCAGATGGCAGAGGACCTTGGTGGGCAAGACCCTGACATTTCACGGAGACGGTCA
TCAGAAATTGAACTAGAGAGGGTCGTCACTTCTAAAGATGAGATCAGGCCTGCAATAAAG
GGGTTCAGCTTTGAGGATAGCCGACTTATGAAGGGAAATTGGATGAAGGAACCAAATGCA
GATGTCATCTTGCTATTCTTTAGGATACTCTCACTTTGTCATACTGCTATTCCTGAGTTA
AATGAGGAGACTGGCAGCTATAATTTCGAAGCAGAGTCTCCTGATGAAGCAGCATTTCTT
GTTGCAGCTAGGGAATTTGGCTTTGAGTTCTGTAAAAGAACTCAATCAAGAGTTTATATA
CGTGAGAAGTATCCTTCTTTTCAAGAGCCCACTGAAAGGGAATTCAAAGTTCTCAATCTA
TTGGACTTCACCAGCAAGCGGAAGAGAATGTCTGTTATCATTCGAGATGAGAGCGGCCAG
ATTCTTCTATTGTGTAAAGGAGCAGACAGCATCATCTATGAGAGATTAGCTAAGAATGGA
AGGAGATTTGAGGAGGCTACCACAAAGCATTTGAATGAATATGGGGAAGCAGGGTTACGT
ACTCTCGTGCTTGCCTACAAAAAGCTGGATGAGACAGAGTACTCTGCGTGGAATGAAGAA
TTCACTAAAGCCAAAGCTTCAATCAGTGGTGATAGAGATGCCATGCTTGAATGTCTATCT
GATATGATGGAAAAGGAATTGATCCTTATTGGTGCTACGGCTGTTGAGGATAAACTACAG
AAGGGAGTTCCTCAGTGTATTGATAAACTGGCGCAAGCTGGTCTCAAGATCTGGGTTCTG
ACAGGTGACAAGATGGAAACAGCCATCAACATAGGGTACGCATGTAGTCTACTTCGGCAT
GGGATGAGACAAATATGCATAACGGCGATGAATGCAGACTCAGTGGAAAGAAGCTCTGAA
CAGGCTATAAGGGAGAACATTTTGATGCAAATCACAAATGCTTCTCAAATGATCAAGCTT
GAAAAGGACCCACATGCTGCATTTGCCTTGATTATTGATGGGAAAACTCTTACATATGCT
TTGGCGTATGATATGAAACATCATTTTTTGAATTTAGCAGTCAGCTGTGCATCTGTCATT
TGCTGTCGTGTCTCTCCTAAGCAGAAGGCCTTGGTTACTAGGTTAGTAAAGGAAGGAACT
GGAAAAACCACATTAGCAATTGGTGATGGTGCAAATGATGTTGGGATGATCCAAGAAGCG
GACATTGGAGTTGGCATTAGCGGTGCAGAAGGAATGCAGGCTGTGATGGCTAGTGACTTT
GCTATTGCACAGTTTCGGTTCTTGGAGAGACTTCTTGTTGTACACGGACATTGGTGCTAC
AAACGAATTGCTCAGATGATATGCTATTTCTTCTACAAAAATATAGCTTTTGGTCTCACA
CTCTTTTACTTCGAGGCTTTTGCGGGCTTTTCGGGCCAGTCTGTCTATGATGATTCATAC
ATGATTCTGTTCAATGTGATTCTTACCTCACTACCCGTGATCGCACTGGGAGTATTCGAG
CAGGATGTGCCTTCTGAAGTGTGCTTACAGTTTCCAGCACTGTACCAGCAAGGGCCCAAA
AACTTGTTCTTTGACTGGTATAGAATATTCGGTTGGCTTGGCAACGGTGTCTACACCTCT
CTCATTGTTTTCTTCCTCAACATTATCATCTTCTATGATCAAGCCTTCCAGGCTGAAGGC
CAGACTGCCGACCTGACTGCTATGGGCACTACGATGTTCACCTGCATTGTCTGGGCTGTC
AACTGTCAGATTGCACTCACAATGAGTCATTTCACATGGATACAACATATTTTCATCTGG
GGAAGTATTGCTAGTTGGTACCTGTTTCTTTTGATCTATGGTATGATAGCGCCAGATTAT
TCTAAATATGCCTTCAGAATCCTTGTGGAAGCTCTAGCTCCTGCTCCAGTCTACTGGTGT
ACCACCCTTTTAGTAATTGTTGTCTGCACCCTTCCCTACCTTGCGCACATATCTTACCAA
AGGTCGTTCAATCCGATGGATCATCACATTATTCAAGAAATCATATATTACAAGAAAGAC
GTTAAAGATCATCATATGTGGAAGAGAGAACGGTCTAAAGCAAGACAGAGTACAAACATC
GGGTTCACAGCAAGAGTAGATGCCAAAATTAGACAGTTGAGAGGGAGGCTTCACAAAAAG
TATACCTCAATGGGTTCCCAAATTGAATTAACACAACCATAG