Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012364
CDS Infomation

pacid=37454027 polypeptide=PGSC0003DMP400008594 locus=PGSC0003DMG400004844 ID=PGSC0003DMT400012364.v4.03 annot-version=v4.03
Sequence

ATGGCGGTGGTAATTGGTGCAGTTTTGCCTGTGATTGTCAAGCTCTTCTTACTGCTTTTA
TGCCTCAATTTTAACTCTTCTCTCACTCAAGCAAGAAAATGGGAATCATGGAAAGATAAA
TACCCATTCATAAAGCCAGCAAGCTCATTCTCATCATCAAATGTTTGGAGCAGTGGCAGT
GGGAGCAGCAAGGGTCATAATTATGACTACATAATAGTGGGAGGAGGCACAGCTGGCTGT
CCATTGGCAGCAACTTTGTCACAGAAATTCAATGTGTTGTTACTGGAAAGAGGAGGAGTC
CCATTTACCAATGCAAATGTCTCCTTAATGCAAAATTTTCACATCTCTTTGGCTGACACT
TCTCCTGCTTCTGCTTCTCAATTTTTTGCCTCAACTGATGGTGTGTTTAATGCAAGGGCT
AGAGTCTTGGGTGGAGGCACTTGCATCAATGCTGGTTTCTATAGTCGCGCTAGCGAAAGC
TATATCGAGAAAGCAGGATGGGATTCTAAACTGGTAAATGAATCATTCCCCTGGATTGAG
AAGCAAATTGTTCATAGACCAATCTTAGCACCATGGCAAAAAGCAGTAAGCGACGGTCTA
CTAGAAGTTGGTATATCACCTTATAATGGATTCACTTATGATCATATATATGGAACCAAG
TTTGGAGGAACCCTTTTCGATAGATTTGGTCATCGAAAGACTGCAGCTGATCTTCTCACC
TCAGCCAACCCTGAGAAGCTTGATGTTTTGGTGCACGCGATAGTTCAAAAGATCAAGTTT
GACACATCAGGAAAGAAGCCAAGAGCAGTAGGAGTCATTTTCAAAGACGAAAAGGGGAAC
CTACACACGGCATTTCTTTCAAAGAGAAAGGGAAGTGAAATTATAGTGTCATCTGGTGCA
ATTGGAAGTCCTCAAATTCTGTTGCTCAGTGGAATAGGACCAAAGGCTGAATTGAAAAAA
TTGAACATCTCGGTGGTGCTTGACAATAAGTTCGTCGGGAAAGGCATGTCTGACAACCCT
ATGAACACCATATTTGTTCCCACAAATAGGCCTGTTCAGCAGTCACTTATTCAGACTGTA
GGAATTACCAAGATGGGGGTCTATATTGAAGCTAGTAGTGGATATGGACAGACTGAAGAT
AGCATTCATTGCCATCATGGTATCGTTTCAGCTGAGATAGGGCAACTCTCCGCAATTCCT
CCAAAGCAGAGAACACTGGAAGCAATTGAAGTCTACAAAAGAAATAAGAAACATGTTCCA
CAAGAAGCATTCAGGGGAGGTTTCATATTAGAAAAGATCGCGACACCTTTATCAACAGGG
CATATTAGCTTGAAGAGCACCGAGATTGATGACAGTCCTTCCGTCACCTTCAACTACTTC
AGCCATCCACGTGACCTGAAGAGATGTGTAGATGGCATACGCATCATGGAGAAGATTGTG
AAATCAAAACATTTCACCACTTACGCACAGTGTGACAAGGATACACTGGACAAGTTGCTA
AACATGAGTGTCCAAGCTAACATTAATCTTATACCGAAACACACTAATGATACAGAGTCA
CTTGAACAGTTCTGCAAAGACACTGTGATCACAATATGGCACTATCACGGCGGTTGCCAA
GTAGGCAAGGTGGTAACCCCTGATTACAGGGTTATGAATGTCAACAGGCTCCGGGTCATT
GATGGTTCGACATTCAACGAGTCACCAGGCACCAATCCTCAAGCCACAGTGTTGATGATG
GGCAGGTACATGGGAGTAAAGATTTTAAGAGAAAGATTAGGAAGAGCAGCTGGTTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008594
PEP Infomation

pacid=37454027 transcript=PGSC0003DMT400012364 locus=PGSC0003DMG400004844 ID=PGSC0003DMT400012364.v4.03 annot-version=v4.03
Sequence

MAVVIGAVLPVIVKLFLLLLCLNFNSSLTQARKWESWKDKYPFIKPASSFSSSNVWSSGS
GSSKGHNYDYIIVGGGTAGCPLAATLSQKFNVLLLERGGVPFTNANVSLMQNFHISLADT
SPASASQFFASTDGVFNARARVLGGGTCINAGFYSRASESYIEKAGWDSKLVNESFPWIE
KQIVHRPILAPWQKAVSDGLLEVGISPYNGFTYDHIYGTKFGGTLFDRFGHRKTAADLLT
SANPEKLDVLVHAIVQKIKFDTSGKKPRAVGVIFKDEKGNLHTAFLSKRKGSEIIVSSGA
IGSPQILLLSGIGPKAELKKLNISVVLDNKFVGKGMSDNPMNTIFVPTNRPVQQSLIQTV
GITKMGVYIEASSGYGQTEDSIHCHHGIVSAEIGQLSAIPPKQRTLEAIEVYKRNKKHVP
QEAFRGGFILEKIATPLSTGHISLKSTEIDDSPSVTFNYFSHPRDLKRCVDGIRIMEKIV
KSKHFTTYAQCDKDTLDKLLNMSVQANINLIPKHTNDTESLEQFCKDTVITIWHYHGGCQ
VGKVVTPDYRVMNVNRLRVIDGSTFNESPGTNPQATVLMMGRYMGVKILRERLGRAAGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400012364
Transcript Infomation

pacid=37454027 locus=PGSC0003DMG400004844 ID=PGSC0003DMT400012364.v4.03 annot-version=v4.03
Sequence

ATGGCGGTGGTAATTGGTGCAGTTTTGCCTGTGATTGTCAAGCTCTTCTTACTGCTTTTA
TGCCTCAATTTTAACTCTTCTCTCACTCAAGCAAGAAAATGGGAATCATGGAAAGATAAA
TACCCATTCATAAAGCCAGCAAGCTCATTCTCATCATCAAATGTTTGGAGCAGTGGCAGT
GGGAGCAGCAAGGGTCATAATTATGACTACATAATAGTGGGAGGAGGCACAGCTGGCTGT
CCATTGGCAGCAACTTTGTCACAGAAATTCAATGTGTTGTTACTGGAAAGAGGAGGAGTC
CCATTTACCAATGCAAATGTCTCCTTAATGCAAAATTTTCACATCTCTTTGGCTGACACT
TCTCCTGCTTCTGCTTCTCAATTTTTTGCCTCAACTGATGGTGTGTTTAATGCAAGGGCT
AGAGTCTTGGGTGGAGGCACTTGCATCAATGCTGGTTTCTATAGTCGCGCTAGCGAAAGC
TATATCGAGAAAGCAGGATGGGATTCTAAACTGGTAAATGAATCATTCCCCTGGATTGAG
AAGCAAATTGTTCATAGACCAATCTTAGCACCATGGCAAAAAGCAGTAAGCGACGGTCTA
CTAGAAGTTGGTATATCACCTTATAATGGATTCACTTATGATCATATATATGGAACCAAG
TTTGGAGGAACCCTTTTCGATAGATTTGGTCATCGAAAGACTGCAGCTGATCTTCTCACC
TCAGCCAACCCTGAGAAGCTTGATGTTTTGGTGCACGCGATAGTTCAAAAGATCAAGTTT
GACACATCAGGAAAGAAGCCAAGAGCAGTAGGAGTCATTTTCAAAGACGAAAAGGGGAAC
CTACACACGGCATTTCTTTCAAAGAGAAAGGGAAGTGAAATTATAGTGTCATCTGGTGCA
ATTGGAAGTCCTCAAATTCTGTTGCTCAGTGGAATAGGACCAAAGGCTGAATTGAAAAAA
TTGAACATCTCGGTGGTGCTTGACAATAAGTTCGTCGGGAAAGGCATGTCTGACAACCCT
ATGAACACCATATTTGTTCCCACAAATAGGCCTGTTCAGCAGTCACTTATTCAGACTGTA
GGAATTACCAAGATGGGGGTCTATATTGAAGCTAGTAGTGGATATGGACAGACTGAAGAT
AGCATTCATTGCCATCATGGTATCGTTTCAGCTGAGATAGGGCAACTCTCCGCAATTCCT
CCAAAGCAGAGAACACTGGAAGCAATTGAAGTCTACAAAAGAAATAAGAAACATGTTCCA
CAAGAAGCATTCAGGGGAGGTTTCATATTAGAAAAGATCGCGACACCTTTATCAACAGGG
CATATTAGCTTGAAGAGCACCGAGATTGATGACAGTCCTTCCGTCACCTTCAACTACTTC
AGCCATCCACGTGACCTGAAGAGATGTGTAGATGGCATACGCATCATGGAGAAGATTGTG
AAATCAAAACATTTCACCACTTACGCACAGTGTGACAAGGATACACTGGACAAGTTGCTA
AACATGAGTGTCCAAGCTAACATTAATCTTATACCGAAACACACTAATGATACAGAGTCA
CTTGAACAGTTCTGCAAAGACACTGTGATCACAATATGGCACTATCACGGCGGTTGCCAA
GTAGGCAAGGTGGTAACCCCTGATTACAGGGTTATGAATGTCAACAGGCTCCGGGTCATT
GATGGTTCGACATTCAACGAGTCACCAGGCACCAATCCTCAAGCCACAGTGTTGATGATG
GGCAGGTACATGGGAGTAAAGATTTTAAGAGAAAGATTAGGAAGAGCAGCTGGTTTGTAA