Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012353
CDS Infomation

pacid=37453047 polypeptide=PGSC0003DMP400008587 locus=PGSC0003DMG402004840 ID=PGSC0003DMT400012353.v4.03 annot-version=v4.03
Sequence

ATGGCTGGAATTGTAGTGTTTTTCGACTTTGACAAGACGATTATCGATGTGGATAGTGAT
AATTGGGTGGTGGATGAGTTAGGCGCCACTGATTTGTTCAATCAGCTTCTCCCCACTATG
CCATGGAACTCTCTCATGGATAGAATGATGAAGGAGCTTCATACGCAAGGCAAAACAATA
CAAGACATTGAAGAGGTACTGAAACGGGTTCCCAGACACCCTAGGATTGTTCCAGCTATT
AAATCAGCTTATGCATTAGGGTGTGATTTGAGAGTAATAAGCGATGCAAATGTATTCTTC
ATTGAAACTATTTTGAAACATGTCGGAATTAGGGATTGTTTCTCAGAGATCAACACCAAT
CCAGGTTACGTCGATGAGGAAGGCAGGCTTCGAATCCTTCCTTATGTTGATTTTCAAACA
TCCCCTCATGGTTGCAATCTCTGCCCTCCCAACATGTGCAAGGGTATGATAGTAGAAAGA
ATTCAAGCCAGCATTGCTAAGGAAGCGAAGAGAAGAATGATCTATCTCGGGGATGGAATC
GGAGATTTCTGCCCCAGTTTGAAGCTGAGGGAAGGAGATTTTGTGATGCCAAGAAAAGAT
TTCCCTGCCTGGAATTTGATAAACAAAAACAGGACACTAGTAAAAGCAGCTGTCCACGAG
TGGACTGATGGGGAAGAACTCGAGCGAATTCTGCTACAACTAATCAACACAATCAACATT
GAAGAAAGCCAATTGTTATCAGTGGAGTTCTGCAAATTCCAGACGATACCCAAAGCAGCT
CATGGAGCCTTGCCACAGGCTCTTCCTGTGCCTTACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008587
PEP Infomation

pacid=37453047 transcript=PGSC0003DMT400012353 locus=PGSC0003DMG402004840 ID=PGSC0003DMT400012353.v4.03 annot-version=v4.03
Sequence

MAGIVVFFDFDKTIIDVDSDNWVVDELGATDLFNQLLPTMPWNSLMDRMMKELHTQGKTI
QDIEEVLKRVPRHPRIVPAIKSAYALGCDLRVISDANVFFIETILKHVGIRDCFSEINTN
PGYVDEEGRLRILPYVDFQTSPHGCNLCPPNMCKGMIVERIQASIAKEAKRRMIYLGDGI
GDFCPSLKLREGDFVMPRKDFPAWNLINKNRTLVKAAVHEWTDGEELERILLQLINTINI
EESQLLSVEFCKFQTIPKAAHGALPQALPVPY*

Transcript Sequence

Transcript ID

PGSC0003DMT400012353
Transcript Infomation

pacid=37453047 locus=PGSC0003DMG402004840 ID=PGSC0003DMT400012353.v4.03 annot-version=v4.03
Sequence

ATGGCTGGAATTGTAGTGTTTTTCGACTTTGACAAGACGATTATCGATGTGGATAGTGAT
AATTGGGTGGTGGATGAGTTAGGCGCCACTGATTTGTTCAATCAGCTTCTCCCCACTATG
CCATGGAACTCTCTCATGGATAGAATGATGAAGGAGCTTCATACGCAAGGCAAAACAATA
CAAGACATTGAAGAGGTACTGAAACGGGTTCCCAGACACCCTAGGATTGTTCCAGCTATT
AAATCAGCTTATGCATTAGGGTGTGATTTGAGAGTAATAAGCGATGCAAATGTATTCTTC
ATTGAAACTATTTTGAAACATGTCGGAATTAGGGATTGTTTCTCAGAGATCAACACCAAT
CCAGGTTACGTCGATGAGGAAGGCAGGCTTCGAATCCTTCCTTATGTTGATTTTCAAACA
TCCCCTCATGGTTGCAATCTCTGCCCTCCCAACATGTGCAAGGGTATGATAGTAGAAAGA
ATTCAAGCCAGCATTGCTAAGGAAGCGAAGAGAAGAATGATCTATCTCGGGGATGGAATC
GGAGATTTCTGCCCCAGTTTGAAGCTGAGGGAAGGAGATTTTGTGATGCCAAGAAAAGAT
TTCCCTGCCTGGAATTTGATAAACAAAAACAGGACACTAGTAAAAGCAGCTGTCCACGAG
TGGACTGATGGGGAAGAACTCGAGCGAATTCTGCTACAACTAATCAACACAATCAACATT
GAAGAAAGCCAATTGTTATCAGTGGAGTTCTGCAAATTCCAGACGATACCCAAAGCAGCT
CATGGAGCCTTGCCACAGGCTCTTCCTGTGCCTTACTGA