Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012347
CDS Infomation

pacid=37451028 polypeptide=PGSC0003DMP400008581 locus=PGSC0003DMG401004840 ID=PGSC0003DMT400012347.v4.03 annot-version=v4.03
Sequence

ATGGCTGGAATTGTAGTGTTTTTCGACTTTGACAAGACGATTATCGATGTGGATAGTGAT
AATTGGGTGGTGGATGAGTTAGGCGCCACTGATTTGTTCAATCAGCTTCTCCCCACTATG
CCATGGAACTCTCTCATGGATAGAATGATGAACGAACTTCATACACAAGTCATAACAATA
CAAGATATTGAAGAGGTACTGAAACGGGTTCCCATACACCCTAGGATTGTTCCAGCTATT
AAATCAGCTTATGCATTAGGGTGTGATTTGAGAGTAATAAGCGATGCAAATGTATTCTTC
ATTGAAACTATCTTGAAACATGTCGGAATTAGGGATTGTTTCTCTGAGATCAACACCAAT
CCAGGCTACGTCAATGAAGAAGGCAGGCTTCGAATCCTCCCTTATGTTGATTTTCAAACA
TCCCCTCATGGATGCAATCTCTGCCCTCCCAACATGTGCAAGGGTATGATAGTAGAAAGA
ATTCAAGCCAGCATGACTAAAGAAGGGAAGAAAAGAATGATCTATCTAGGTGATGGAATC
GGGGATTTCTGTCCCAGTTTGAAGCTCATGGAAGCAGATTTTGTGATGCCAAGAAAAGAT
TTCCCAGCCTGGAATTTGATAAATAAAAACAGGACACTAGTAAAAGCAACTGTCCACGAG
TGGGCAGATGGGGAAGAATTCGAGCACATTCTACTACAACTAATAAACACAATCAGTGTT
GAAGAAAGCCGATTGTTATCAGTTGAGTACTGCAAATTCCAGACAATGTCAAAAGCAACT
CATGGAGCATTGCCACCGGCTCTTCCAGTGCCTTACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008581
PEP Infomation

pacid=37451028 transcript=PGSC0003DMT400012347 locus=PGSC0003DMG401004840 ID=PGSC0003DMT400012347.v4.03 annot-version=v4.03
Sequence

MAGIVVFFDFDKTIIDVDSDNWVVDELGATDLFNQLLPTMPWNSLMDRMMNELHTQVITI
QDIEEVLKRVPIHPRIVPAIKSAYALGCDLRVISDANVFFIETILKHVGIRDCFSEINTN
PGYVNEEGRLRILPYVDFQTSPHGCNLCPPNMCKGMIVERIQASMTKEGKKRMIYLGDGI
GDFCPSLKLMEADFVMPRKDFPAWNLINKNRTLVKATVHEWADGEEFEHILLQLINTISV
EESRLLSVEYCKFQTMSKATHGALPPALPVPY*

Transcript Sequence

Transcript ID

PGSC0003DMT400012347
Transcript Infomation

pacid=37451028 locus=PGSC0003DMG401004840 ID=PGSC0003DMT400012347.v4.03 annot-version=v4.03
Sequence

ATGGCTGGAATTGTAGTGTTTTTCGACTTTGACAAGACGATTATCGATGTGGATAGTGAT
AATTGGGTGGTGGATGAGTTAGGCGCCACTGATTTGTTCAATCAGCTTCTCCCCACTATG
CCATGGAACTCTCTCATGGATAGAATGATGAACGAACTTCATACACAAGTCATAACAATA
CAAGATATTGAAGAGGTACTGAAACGGGTTCCCATACACCCTAGGATTGTTCCAGCTATT
AAATCAGCTTATGCATTAGGGTGTGATTTGAGAGTAATAAGCGATGCAAATGTATTCTTC
ATTGAAACTATCTTGAAACATGTCGGAATTAGGGATTGTTTCTCTGAGATCAACACCAAT
CCAGGCTACGTCAATGAAGAAGGCAGGCTTCGAATCCTCCCTTATGTTGATTTTCAAACA
TCCCCTCATGGATGCAATCTCTGCCCTCCCAACATGTGCAAGGGTATGATAGTAGAAAGA
ATTCAAGCCAGCATGACTAAAGAAGGGAAGAAAAGAATGATCTATCTAGGTGATGGAATC
GGGGATTTCTGTCCCAGTTTGAAGCTCATGGAAGCAGATTTTGTGATGCCAAGAAAAGAT
TTCCCAGCCTGGAATTTGATAAATAAAAACAGGACACTAGTAAAAGCAACTGTCCACGAG
TGGGCAGATGGGGAAGAATTCGAGCACATTCTACTACAACTAATAAACACAATCAGTGTT
GAAGAAAGCCGATTGTTATCAGTTGAGTACTGCAAATTCCAGACAATGTCAAAAGCAACT
CATGGAGCATTGCCACCGGCTCTTCCAGTGCCTTACTAA