Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012323
CDS Infomation

pacid=37471399 polypeptide=PGSC0003DMP400008567 locus=PGSC0003DMG400004829 ID=PGSC0003DMT400012323.v4.03 annot-version=v4.03
Sequence

ATGGAAACTGAAACCTTCATTAGACCCAACAACAAATCAAAGAAGAAACAAAGATCTCCA
CTTTTAACTTTCCTTTTTCTCTTCACTTTGATTCTCCTTTTCTTCTACTTCAAGAACTTC
ATTTCCCCTTCTCTTCTTCCCCTTTCCAAAAAATCAATACCCATTATTCCCCGTCCCCAA
CAATGCAACCCCACAAATCGTCTTCAAGGAAAGTTCATGTGGTATGCGCCTCACAGTGGG
TTCAGCAACCAGTTGGCTGAGTTCAAGAATGCGATTTTGATGGCTAAGATTCTTAATCGG
ACCCTAGTTGTACCACCCGTGTTGGATCATCATGCTGTTGCGCTTGGTAGTTGTCCTAAA
TTTAGGGTTTTGGAACCTAATGAATTGAGATACTTGGTTTGGAATCATAGTATTCAGCTC
TTGCGTGATTGCAGATATGTATCCATGGCTGATATAGTTGACCTTTCACCACTTGCTTCT
TATTCAACAGTGAGATTTATAGATTTTCGTGCTTTTGTGTCCTCCTGGTGTGGTGTAAAC
TTGGATGTTATTTGCTCTAAGGACCAAAATATACCATCTCCATTATCTGAGAGCCTTCGA
CAATGTGGTTCTCTATTGTCTGGTTATTATGGTAGTTTCAGTGGTTGTTTGTCTGCGTTA
AAAGAAGATTGTAGAACAACAGTTTGGACATATAAAAAGGACAATGAAGATGGAGCTTTA
GACTCGTTTCAACCTGATGACCAACTTAGGAAGAAAAAGAAGATATCATTTATTAGGAGA
AGGAAAGATGTGTATAAAGCTCTTGGTCCTGGTTCTGCTGCAGAATCAGCCACTGTTTTG
GCATTTGGAAGCCTTTTTACTGCTCCTTATAAGGGATCTGAATCCCATGTTGACATTCAT
GAAGCTCCTAATGATCCCATTGTACAGACCTTAATAAAAAAGATAGAGTTCCTTCCCTTT
GTGCCCGAAATAATAAATGCCGGCAAGAAGTTTGCTCTTCAAACTATCAAGGGTCCCTTT
CTTTGTGCACAGCTCAGGCTACTAGATGGACAATTCAAGAACCACCATAAAGCTACTTTT
CTTGGTCTGAAGCAGAAAATAGAATCTTTGAGGCAAACAGGACAGAAACAGATCCATGTA
TTTGTGATGACTGATCTCCCCATGGCTAATTGGACAGGGAGTTACTTGGGGAACTTAGCA
AAAGATTCAGATGCCTTTAAGCTGTTTGTTATTAGAGAAGAAGATGACTTGGTTCAAGAA
ACTGCTAAAGAAGTCATGGCTGCAGGGCATGGGCTAAAACTTGGTTCTGTTTCACAGAGT
TCGGCAGGGATTGACAAGCGTCACTATCCTCAATCATTAACTGATGTTCTCTTATACATA
GAGGAAGTAGTCTGCAGCTGTGCTTCTCTTGGTTTTGTGGGCACTGCTGGGTCAACAATT
GCCGAGAGCATAGAATTAATGAGAAAACATGACATTTGTTCTGGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008567
PEP Infomation

pacid=37471399 transcript=PGSC0003DMT400012323 locus=PGSC0003DMG400004829 ID=PGSC0003DMT400012323.v4.03 annot-version=v4.03
Sequence

METETFIRPNNKSKKKQRSPLLTFLFLFTLILLFFYFKNFISPSLLPLSKKSIPIIPRPQ
QCNPTNRLQGKFMWYAPHSGFSNQLAEFKNAILMAKILNRTLVVPPVLDHHAVALGSCPK
FRVLEPNELRYLVWNHSIQLLRDCRYVSMADIVDLSPLASYSTVRFIDFRAFVSSWCGVN
LDVICSKDQNIPSPLSESLRQCGSLLSGYYGSFSGCLSALKEDCRTTVWTYKKDNEDGAL
DSFQPDDQLRKKKKISFIRRRKDVYKALGPGSAAESATVLAFGSLFTAPYKGSESHVDIH
EAPNDPIVQTLIKKIEFLPFVPEIINAGKKFALQTIKGPFLCAQLRLLDGQFKNHHKATF
LGLKQKIESLRQTGQKQIHVFVMTDLPMANWTGSYLGNLAKDSDAFKLFVIREEDDLVQE
TAKEVMAAGHGLKLGSVSQSSAGIDKRHYPQSLTDVLLYIEEVVCSCASLGFVGTAGSTI
AESIELMRKHDICSG*

Transcript Sequence

Transcript ID

PGSC0003DMT400012323
Transcript Infomation

pacid=37471399 locus=PGSC0003DMG400004829 ID=PGSC0003DMT400012323.v4.03 annot-version=v4.03
Sequence

ATGGAAACTGAAACCTTCATTAGACCCAACAACAAATCAAAGAAGAAACAAAGATCTCCA
CTTTTAACTTTCCTTTTTCTCTTCACTTTGATTCTCCTTTTCTTCTACTTCAAGAACTTC
ATTTCCCCTTCTCTTCTTCCCCTTTCCAAAAAATCAATACCCATTATTCCCCGTCCCCAA
CAATGCAACCCCACAAATCGTCTTCAAGGAAAGTTCATGTGGTATGCGCCTCACAGTGGG
TTCAGCAACCAGTTGGCTGAGTTCAAGAATGCGATTTTGATGGCTAAGATTCTTAATCGG
ACCCTAGTTGTACCACCCGTGTTGGATCATCATGCTGTTGCGCTTGGTAGTTGTCCTAAA
TTTAGGGTTTTGGAACCTAATGAATTGAGATACTTGGTTTGGAATCATAGTATTCAGCTC
TTGCGTGATTGCAGATATGTATCCATGGCTGATATAGTTGACCTTTCACCACTTGCTTCT
TATTCAACAGTGAGATTTATAGATTTTCGTGCTTTTGTGTCCTCCTGGTGTGGTGTAAAC
TTGGATGTTATTTGCTCTAAGGACCAAAATATACCATCTCCATTATCTGAGAGCCTTCGA
CAATGTGGTTCTCTATTGTCTGGTTATTATGGTAGTTTCAGTGGTTGTTTGTCTGCGTTA
AAAGAAGATTGTAGAACAACAGTTTGGACATATAAAAAGGACAATGAAGATGGAGCTTTA
GACTCGTTTCAACCTGATGACCAACTTAGGAAGAAAAAGAAGATATCATTTATTAGGAGA
AGGAAAGATGTGTATAAAGCTCTTGGTCCTGGTTCTGCTGCAGAATCAGCCACTGTTTTG
GCATTTGGAAGCCTTTTTACTGCTCCTTATAAGGGATCTGAATCCCATGTTGACATTCAT
GAAGCTCCTAATGATCCCATTGTACAGACCTTAATAAAAAAGATAGAGTTCCTTCCCTTT
GTGCCCGAAATAATAAATGCCGGCAAGAAGTTTGCTCTTCAAACTATCAAGGGTCCCTTT
CTTTGTGCACAGCTCAGGCTACTAGATGGACAATTCAAGAACCACCATAAAGCTACTTTT
CTTGGTCTGAAGCAGAAAATAGAATCTTTGAGGCAAACAGGACAGAAACAGATCCATGTA
TTTGTGATGACTGATCTCCCCATGGCTAATTGGACAGGGAGTTACTTGGGGAACTTAGCA
AAAGATTCAGATGCCTTTAAGCTGTTTGTTATTAGAGAAGAAGATGACTTGGTTCAAGAA
ACTGCTAAAGAAGTCATGGCTGCAGGGCATGGGCTAAAACTTGGTTCTGTTTCACAGAGT
TCGGCAGGGATTGACAAGCGTCACTATCCTCAATCATTAACTGATGTTCTCTTATACATA
GAGGAAGTAGTCTGCAGCTGTGCTTCTCTTGGTTTTGTGGGCACTGCTGGGTCAACAATT
GCCGAGAGCATAGAATTAATGAGAAAACATGACATTTGTTCTGGCTAA