Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012318
CDS Infomation

pacid=37467976 polypeptide=PGSC0003DMP400008565 locus=PGSC0003DMG400004827 ID=PGSC0003DMT400012318.v4.03 annot-version=v4.03
Sequence

ATGGAGAGAATAGATTACTTGGCTGATGAGAGGAAGAAAGCTGAGTTCAATGTTGATGAG
ATGAAAATTGTTTGGGCTGGTTCTCGCCGTGCTTTTGAAGTTTCAGATTATATCTCCAAG
CTTGTTGCTGATGATCCTGGCTTCAGTAAGGAGGAAAGGACCATGCTTCCCAGGAAAGAA
CTATTTAAGAACACTCTAAGGAAGTCAGCATGCTCATGGAAACACATCATTGATCTTCAG
CTTTCTGAAGAAGAAGCAGAAAGGTTAAGATATTTCGTCGATGAGCCTGCTTTTATTGAT
TCTCATTTGGGAGTGTTTATACCCGCTATAAAAGGACAGGGCACGAAGGAACAACTGAAA
AAGTGGTTGCCGTTGGCATACAAGATGCAAATTATTGGCTGCTATGCTCAAACTGAACTT
GGACATGGGTCCAATGTTCAAGGCCTTGAAACCACTGCCACATTCGATCCCCAAACAGAT
GAATTTGTCATGCATAGTCCAACACTGACATCAAGCAAGTGGTGGCCTGGTGGATTGGGT
AAAGTCTCTACCCATGCGATTGTGTATGCTCGTCTTATAACAGATGGTATAGATCATGGG
ATAAACGGTTTTATTGTCCAACTACGGAGCTTGGAGGACCACAAACCTCTTCCAGGCATT
ACTGTCGGAGATATTGGAACAAAATTTGGAAACGGGGCATACAATACCATGGATAATGGG
GTACTAAGATTTGATCACGTGCGTATTCCAAGAGATCAAATGCTGATGAGGGTTGCACAA
GTTACCAAGGACGGAAAATATGTCCAATCTGATGTTCCTCGACAACTTCTCTATGTGTCC
ATGGTATATACTCGTCAAGAACTTGTAACATATGCTTCTGGTGCTTTGTCTCGGGCAGTG
TGTATTGCAACGAGATATAGTGCTGTTCGTAGACAATTTGGTTCTCAAAATGGTGGACAA
GAAATTCAGGTGATTGACTACAAAACTCAACAAAGCAGGCTCTTCCCCTTGTTAGCTTCT
GCATATGCCTTCAGATTTGTTGGTGAGTGGCTGAAATGGTTTTACACTGATGTAACTCAA
AGACTGCAAGCAAATGATTTCTCAACGCTGCCTGAGTTGCACGCGACTACAGCAGGAATA
AAGTCTTTGACAACCACTGCCACTGCTGATGGAATTGAAGAATGCCGAAAGTTGTGTGGA
GGTCATGGTTATCTTTGTAGCAGTGGACTTCCAGAATTATATGCCGTTTATGTCCCTGCC
TGTACATTTGAAGGAGATAACGTCGTGCTACTGCTTCAGGTTGCAAGGTTTCTTATGAAA
ACTGTTTCACAGCTGAGCTCCGGAAAGAAGCCAACGGGTACCATAACTTATATGGGGAAA
ATTGAACACTTGATGCAATGCCATTCTGATGTGGAACAAGCCAAGGACTGGCTGAAACCT
AGTGCAATATTGGAAGCATTTGAATCAAGGGCTGCCAGGATGTCTGTTGCCTGTGCTCAG
AGTCTTACCAAGTTTGATAATCCAGAAGAAGGCTTTCAAGAACTTGCACCTGATTTAGTT
GAAGCAGCACTTGCTCATTCTCAGTTGATTGTTGTCTCCAAGTTTATCGAAAAGCTGCAA
CAAGACATTCCAGGGGAAGGCGTTAAGCAACAGCTGGAGGTGCTTTGTAGCATCTATGCA
CTCTTCCTACTTCACAAACATCAAGGAGATTTCCTCGCGACTGGCTACATCACCTCAAAG
CAGGGGTTATTTGCTAATGAGCAGCTCAGGGCCTTGTATACTCAGGTTCGTCCAAATGCT
GTATCGTTGGCTGATGCATTTAACCATACCGATCATTTCCTTGGTTCAATTCTTGGACGT
TATGATGGAAATGTGTACCCAAAACTGTATGAGGCTGCGTGGAAGGATCCTCTCAACGAA
TCAGATGTACCCGATGGCTTCGATGAATATATCAGGCCACTACTCAAGCAGCAACTGCAG
ACTGCTAGATTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008565
PEP Infomation

pacid=37467976 transcript=PGSC0003DMT400012318 locus=PGSC0003DMG400004827 ID=PGSC0003DMT400012318.v4.03 annot-version=v4.03
Sequence

MERIDYLADERKKAEFNVDEMKIVWAGSRRAFEVSDYISKLVADDPGFSKEERTMLPRKE
LFKNTLRKSACSWKHIIDLQLSEEEAERLRYFVDEPAFIDSHLGVFIPAIKGQGTKEQLK
KWLPLAYKMQIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVMHSPTLTSSKWWPGGLG
KVSTHAIVYARLITDGIDHGINGFIVQLRSLEDHKPLPGITVGDIGTKFGNGAYNTMDNG
VLRFDHVRIPRDQMLMRVAQVTKDGKYVQSDVPRQLLYVSMVYTRQELVTYASGALSRAV
CIATRYSAVRRQFGSQNGGQEIQVIDYKTQQSRLFPLLASAYAFRFVGEWLKWFYTDVTQ
RLQANDFSTLPELHATTAGIKSLTTTATADGIEECRKLCGGHGYLCSSGLPELYAVYVPA
CTFEGDNVVLLLQVARFLMKTVSQLSSGKKPTGTITYMGKIEHLMQCHSDVEQAKDWLKP
SAILEAFESRAARMSVACAQSLTKFDNPEEGFQELAPDLVEAALAHSQLIVVSKFIEKLQ
QDIPGEGVKQQLEVLCSIYALFLLHKHQGDFLATGYITSKQGLFANEQLRALYTQVRPNA
VSLADAFNHTDHFLGSILGRYDGNVYPKLYEAAWKDPLNESDVPDGFDEYIRPLLKQQLQ
TARL*

Transcript Sequence

Transcript ID

PGSC0003DMT400012318
Transcript Infomation

pacid=37467976 locus=PGSC0003DMG400004827 ID=PGSC0003DMT400012318.v4.03 annot-version=v4.03
Sequence

ATGGAGAGAATAGATTACTTGGCTGATGAGAGGAAGAAAGCTGAGTTCAATGTTGATGAG
ATGAAAATTGTTTGGGCTGGTTCTCGCCGTGCTTTTGAAGTTTCAGATTATATCTCCAAG
CTTGTTGCTGATGATCCTGGCTTCAGTAAGGAGGAAAGGACCATGCTTCCCAGGAAAGAA
CTATTTAAGAACACTCTAAGGAAGTCAGCATGCTCATGGAAACACATCATTGATCTTCAG
CTTTCTGAAGAAGAAGCAGAAAGGTTAAGATATTTCGTCGATGAGCCTGCTTTTATTGAT
TCTCATTTGGGAGTGTTTATACCCGCTATAAAAGGACAGGGCACGAAGGAACAACTGAAA
AAGTGGTTGCCGTTGGCATACAAGATGCAAATTATTGGCTGCTATGCTCAAACTGAACTT
GGACATGGGTCCAATGTTCAAGGCCTTGAAACCACTGCCACATTCGATCCCCAAACAGAT
GAATTTGTCATGCATAGTCCAACACTGACATCAAGCAAGTGGTGGCCTGGTGGATTGGGT
AAAGTCTCTACCCATGCGATTGTGTATGCTCGTCTTATAACAGATGGTATAGATCATGGG
ATAAACGGTTTTATTGTCCAACTACGGAGCTTGGAGGACCACAAACCTCTTCCAGGCATT
ACTGTCGGAGATATTGGAACAAAATTTGGAAACGGGGCATACAATACCATGGATAATGGG
GTACTAAGATTTGATCACGTGCGTATTCCAAGAGATCAAATGCTGATGAGGGTTGCACAA
GTTACCAAGGACGGAAAATATGTCCAATCTGATGTTCCTCGACAACTTCTCTATGTGTCC
ATGGTATATACTCGTCAAGAACTTGTAACATATGCTTCTGGTGCTTTGTCTCGGGCAGTG
TGTATTGCAACGAGATATAGTGCTGTTCGTAGACAATTTGGTTCTCAAAATGGTGGACAA
GAAATTCAGGTGATTGACTACAAAACTCAACAAAGCAGGCTCTTCCCCTTGTTAGCTTCT
GCATATGCCTTCAGATTTGTTGGTGAGTGGCTGAAATGGTTTTACACTGATGTAACTCAA
AGACTGCAAGCAAATGATTTCTCAACGCTGCCTGAGTTGCACGCGACTACAGCAGGAATA
AAGTCTTTGACAACCACTGCCACTGCTGATGGAATTGAAGAATGCCGAAAGTTGTGTGGA
GGTCATGGTTATCTTTGTAGCAGTGGACTTCCAGAATTATATGCCGTTTATGTCCCTGCC
TGTACATTTGAAGGAGATAACGTCGTGCTACTGCTTCAGGTTGCAAGGTTTCTTATGAAA
ACTGTTTCACAGCTGAGCTCCGGAAAGAAGCCAACGGGTACCATAACTTATATGGGGAAA
ATTGAACACTTGATGCAATGCCATTCTGATGTGGAACAAGCCAAGGACTGGCTGAAACCT
AGTGCAATATTGGAAGCATTTGAATCAAGGGCTGCCAGGATGTCTGTTGCCTGTGCTCAG
AGTCTTACCAAGTTTGATAATCCAGAAGAAGGCTTTCAAGAACTTGCACCTGATTTAGTT
GAAGCAGCACTTGCTCATTCTCAGTTGATTGTTGTCTCCAAGTTTATCGAAAAGCTGCAA
CAAGACATTCCAGGGGAAGGCGTTAAGCAACAGCTGGAGGTGCTTTGTAGCATCTATGCA
CTCTTCCTACTTCACAAACATCAAGGAGATTTCCTCGCGACTGGCTACATCACCTCAAAG
CAGGGGTTATTTGCTAATGAGCAGCTCAGGGCCTTGTATACTCAGGTTCGTCCAAATGCT
GTATCGTTGGCTGATGCATTTAACCATACCGATCATTTCCTTGGTTCAATTCTTGGACGT
TATGATGGAAATGTGTACCCAAAACTGTATGAGGCTGCGTGGAAGGATCCTCTCAACGAA
TCAGATGTACCCGATGGCTTCGATGAATATATCAGGCCACTACTCAAGCAGCAACTGCAG
ACTGCTAGATTGTGA