Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012303
CDS Infomation

pacid=37471267 polypeptide=PGSC0003DMP400008551 locus=PGSC0003DMG400004822 ID=PGSC0003DMT400012303.v4.03 annot-version=v4.03
Sequence

ATGGTAGCAATAGTGAAATATGGAATAATTGGTGTTGGTATGATGGGAAGAGAACATTTA
ATCAATCTTTATCATCTTAAATCTGAAGGAGTTTCTGTTGTTGCCATTGCTGATCCACAT
CTTCCTTCACAAAAATATGCACAAAAATTAGCAGATTCATTTGATTGGCCTCTTCAGGTT
TATGCAGGGCACAAGCAGTTGTTAGAAAGTGGGCTATGTGATGTGGTGGTAGTTTCAACT
CCAAACATGACTCACTATGAAATTCTCATGGATATCATCAATCACCCAAAACCCCATCAT
GTTTTGGTGGAGAAGCCTTTGTGCACAAATGTTTCAGACTGCAAAAAGGTCATAACTGCT
GCCAAAACGAGATCCGATATGGTGGTACAAGTTGGGCTAGAGTACAGATACATGCCTCCT
GTTGCTAAACTGATAGACATAGTTAAAGAAGGAGCTTTAGGACAAGTGAAGATGGTGTCA
ATTCGAGAACATCGATTTCCATTTCTTGTTAAGGTCGATAATTGGAATCGTTTCAACTGC
AACACTGGAGGTACTCTGGTGGAGAAATGCTGTCATTTCTTTGATCTCATGAGGCTTTTC
ATTGGAGCTAATCCTGTTCGTGTTATGGCATCTGGAGCGATGGATTTGAATCACAAAGAT
GAAGTGTATGATGGACGGGTGCCTGATATAATTGACAATGCTTATGTTATTGTGGAATTC
GACAATGGTTGTCGTGGTATGCTTGATCTATGTATGTTTGCTGAAGGAAGTAAAAATGAG
CAAGAAATATCTGTAGTAGGTGATACTGGAAAGGGTGAGGCACTTGTGCCTGAGAGCATT
GTGCGTTGGGGGACACGAGCTGAAGGAAGAAACGGTGTACAGACATTACTAGCTGAAGAT
AAGCGGATAAAATATGATGGGCTACATCACGGTTCAAGCTACTTAGAGCACCTACAGTTT
TTGTCAGCAGTAAGAGCAAAAGGAGAACAAGCTCCTGCTGTTGATTTACATGATGGATTG
GTTTCAGTAGCCATTGGAGTTGCTGCACAGCTTTCGATTCAGAAAGGACGATCTGTTACG
ATTGAGGAAGTCATGCATGAACAGCTTCTTCAATCCACCAAGTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008551
PEP Infomation

pacid=37471267 transcript=PGSC0003DMT400012303 locus=PGSC0003DMG400004822 ID=PGSC0003DMT400012303.v4.03 annot-version=v4.03
Sequence

MVAIVKYGIIGVGMMGREHLINLYHLKSEGVSVVAIADPHLPSQKYAQKLADSFDWPLQV
YAGHKQLLESGLCDVVVVSTPNMTHYEILMDIINHPKPHHVLVEKPLCTNVSDCKKVITA
AKTRSDMVVQVGLEYRYMPPVAKLIDIVKEGALGQVKMVSIREHRFPFLVKVDNWNRFNC
NTGGTLVEKCCHFFDLMRLFIGANPVRVMASGAMDLNHKDEVYDGRVPDIIDNAYVIVEF
DNGCRGMLDLCMFAEGSKNEQEISVVGDTGKGEALVPESIVRWGTRAEGRNGVQTLLAED
KRIKYDGLHHGSSYLEHLQFLSAVRAKGEQAPAVDLHDGLVSVAIGVAAQLSIQKGRSVT
IEEVMHEQLLQSTKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400012303
Transcript Infomation

pacid=37471267 locus=PGSC0003DMG400004822 ID=PGSC0003DMT400012303.v4.03 annot-version=v4.03
Sequence

ATGGTAGCAATAGTGAAATATGGAATAATTGGTGTTGGTATGATGGGAAGAGAACATTTA
ATCAATCTTTATCATCTTAAATCTGAAGGAGTTTCTGTTGTTGCCATTGCTGATCCACAT
CTTCCTTCACAAAAATATGCACAAAAATTAGCAGATTCATTTGATTGGCCTCTTCAGGTT
TATGCAGGGCACAAGCAGTTGTTAGAAAGTGGGCTATGTGATGTGGTGGTAGTTTCAACT
CCAAACATGACTCACTATGAAATTCTCATGGATATCATCAATCACCCAAAACCCCATCAT
GTTTTGGTGGAGAAGCCTTTGTGCACAAATGTTTCAGACTGCAAAAAGGTCATAACTGCT
GCCAAAACGAGATCCGATATGGTGGTACAAGTTGGGCTAGAGTACAGATACATGCCTCCT
GTTGCTAAACTGATAGACATAGTTAAAGAAGGAGCTTTAGGACAAGTGAAGATGGTGTCA
ATTCGAGAACATCGATTTCCATTTCTTGTTAAGGTCGATAATTGGAATCGTTTCAACTGC
AACACTGGAGGTACTCTGGTGGAGAAATGCTGTCATTTCTTTGATCTCATGAGGCTTTTC
ATTGGAGCTAATCCTGTTCGTGTTATGGCATCTGGAGCGATGGATTTGAATCACAAAGAT
GAAGTGTATGATGGACGGGTGCCTGATATAATTGACAATGCTTATGTTATTGTGGAATTC
GACAATGGTTGTCGTGGTATGCTTGATCTATGTATGTTTGCTGAAGGAAGTAAAAATGAG
CAAGAAATATCTGTAGTAGGTGATACTGGAAAGGGTGAGGCACTTGTGCCTGAGAGCATT
GTGCGTTGGGGGACACGAGCTGAAGGAAGAAACGGTGTACAGACATTACTAGCTGAAGAT
AAGCGGATAAAATATGATGGGCTACATCACGGTTCAAGCTACTTAGAGCACCTACAGTTT
TTGTCAGCAGTAAGAGCAAAAGGAGAACAAGCTCCTGCTGTTGATTTACATGATGGATTG
GTTTCAGTAGCCATTGGAGTTGCTGCACAGCTTTCGATTCAGAAAGGACGATCTGTTACG
ATTGAGGAAGTCATGCATGAACAGCTTCTTCAATCCACCAAGTCTTGA