Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012233
CDS Infomation

pacid=37471184 polypeptide=PGSC0003DMP400008505 locus=PGSC0003DMG400004800 ID=PGSC0003DMT400012233.v4.03 annot-version=v4.03
Sequence

ATGAAAAATAGTAGTTCATCATCATCACTTGGCCCTGGTGGTCTAGACTTGAGCCAAGTT
TTTTTCAAGTCAATTTCCAATGCTGCCCCTCCTTCACCCACAAAACGCCACACTAAAATC
TCCGTCATCGGCGTCGGAAACGTCGGTATGGCAATTGCACAAACAATCCTAACACAAGAC
CTAGCCGACGAGCTTGCACTCGTCGACGCAAAATCCGACAAGCTCCGAGGAGAAATGCTG
GATCTTCAGCACGCGGCAGCGTTTCTGCCGCGTACGAAGATCAACGCATCGACTGATTAC
TCGGTTACTTCCGGGTCGGATCTTTGCATTGTAACTGCAGGTGCCCGACAGAATCCGGGT
GAGAGTAGGTTGAATTTGTTGCAGAGGAATGTGGCTCTGTTTAAGAGTATTATTCCGCCG
TTGGTGAAGTATTCGCCGGACACTACGCTTCTAGTAGTTTCGAATCCGGTAGATGTGCTG
ACGTATGTTGCTTGGAAATTGTCTGGGTTTCCGGCGAATCGGGTTATCGGGTCGGGAACG
AATTTGGATTCTTCTAGATTTCGGTTTTTGATTGCGGATCATCTTGATGTTAATGCCCAG
GATGTACAGGCATACATTGTTGGAGAGCATGGTGATAGCTCAGTGGCACTTTGGTCAGGC
ATTAGTGTAGGAGGAGTGCCAGTCCTCAGTTTCCTTGAGAGGCAACAAATTGCTTTGGAA
AAAGAGACACTGGAAAAAATCCACCAAGAAGTTGTGCACAGTGCATATGAAGTGATTAGT
CTGAAAGGTTACACATCATGGGCAATTGGCTACTCTGTTGCTAACTTGGCTCGAACAATC
CTTCGCGATCAAAGAAGGATTCATCCTGTTTCGGTTCTTGCAAAGGGGTTTTATGGCATT
GATGGTGGCGATGTGTTCTTGAGCTTGCCTGCACAGCTTGGTAGAAGTGGAGTTTTGGGC
GTGACGAATGTGCATCTTACTGATGAAGAAATTGAGCAACTTAGGAACTCTGCTAAGACT
ATTTTGGAAGTGCAGAGTCAGTTGGGAATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008505
PEP Infomation

pacid=37471184 transcript=PGSC0003DMT400012233 locus=PGSC0003DMG400004800 ID=PGSC0003DMT400012233.v4.03 annot-version=v4.03
Sequence

MKNSSSSSSLGPGGLDLSQVFFKSISNAAPPSPTKRHTKISVIGVGNVGMAIAQTILTQD
LADELALVDAKSDKLRGEMLDLQHAAAFLPRTKINASTDYSVTSGSDLCIVTAGARQNPG
ESRLNLLQRNVALFKSIIPPLVKYSPDTTLLVVSNPVDVLTYVAWKLSGFPANRVIGSGT
NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSGISVGGVPVLSFLERQQIALE
KETLEKIHQEVVHSAYEVISLKGYTSWAIGYSVANLARTILRDQRRIHPVSVLAKGFYGI
DGGDVFLSLPAQLGRSGVLGVTNVHLTDEEIEQLRNSAKTILEVQSQLGI*

Transcript Sequence

Transcript ID

PGSC0003DMT400012233
Transcript Infomation

pacid=37471184 locus=PGSC0003DMG400004800 ID=PGSC0003DMT400012233.v4.03 annot-version=v4.03
Sequence

ATGAAAAATAGTAGTTCATCATCATCACTTGGCCCTGGTGGTCTAGACTTGAGCCAAGTT
TTTTTCAAGTCAATTTCCAATGCTGCCCCTCCTTCACCCACAAAACGCCACACTAAAATC
TCCGTCATCGGCGTCGGAAACGTCGGTATGGCAATTGCACAAACAATCCTAACACAAGAC
CTAGCCGACGAGCTTGCACTCGTCGACGCAAAATCCGACAAGCTCCGAGGAGAAATGCTG
GATCTTCAGCACGCGGCAGCGTTTCTGCCGCGTACGAAGATCAACGCATCGACTGATTAC
TCGGTTACTTCCGGGTCGGATCTTTGCATTGTAACTGCAGGTGCCCGACAGAATCCGGGT
GAGAGTAGGTTGAATTTGTTGCAGAGGAATGTGGCTCTGTTTAAGAGTATTATTCCGCCG
TTGGTGAAGTATTCGCCGGACACTACGCTTCTAGTAGTTTCGAATCCGGTAGATGTGCTG
ACGTATGTTGCTTGGAAATTGTCTGGGTTTCCGGCGAATCGGGTTATCGGGTCGGGAACG
AATTTGGATTCTTCTAGATTTCGGTTTTTGATTGCGGATCATCTTGATGTTAATGCCCAG
GATGTACAGGCATACATTGTTGGAGAGCATGGTGATAGCTCAGTGGCACTTTGGTCAGGC
ATTAGTGTAGGAGGAGTGCCAGTCCTCAGTTTCCTTGAGAGGCAACAAATTGCTTTGGAA
AAAGAGACACTGGAAAAAATCCACCAAGAAGTTGTGCACAGTGCATATGAAGTGATTAGT
CTGAAAGGTTACACATCATGGGCAATTGGCTACTCTGTTGCTAACTTGGCTCGAACAATC
CTTCGCGATCAAAGAAGGATTCATCCTGTTTCGGTTCTTGCAAAGGGGTTTTATGGCATT
GATGGTGGCGATGTGTTCTTGAGCTTGCCTGCACAGCTTGGTAGAAGTGGAGTTTTGGGC
GTGACGAATGTGCATCTTACTGATGAAGAAATTGAGCAACTTAGGAACTCTGCTAAGACT
ATTTTGGAAGTGCAGAGTCAGTTGGGAATTTGA