Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012219
CDS Infomation

pacid=37467977 polypeptide=PGSC0003DMP400008495 locus=PGSC0003DMG400004792 ID=PGSC0003DMT400012219.v4.03 annot-version=v4.03
Sequence

ATGGACTTGAATTCGGCACAAGCTTCTCCAGTTCTTACTGATCCTTCACCGTTGAACAAG
TCCAGATTGGGAATCCATTCTAGTTTATTTCCTTATTCACAATCTGGGCCTTCATTCTCC
ACTAGCGTGCTATCAATTCCTAGAAAGAAGCCAGCGAAGCTTGATGATGTTCGATCCAAT
GGTTGGCTTGACGCAATGAAGTCGTCTTCACCTCCTAGGAAGAAGATTCTGAAGGATGTA
AACATTGATGTTTCTTCTGATGATGCTGATGTTACTTACCTTTCTTGGATGATAAAGTAT
CCATCAGCTCTCAACTGCTTTCAGCAAATTATGAGGCAAGCAAGGAATAAACAGATAGTG
ATTTTCTTAGATTATGATGGGACTCTTTCTCCTATCGTTGATGACCCTGACCGTGCTTTT
ATGTCCAATGAGATGCGCTCTGTTGTCAGTAATGTTGCAAAGTATTTCCCAACAACAATC
ATCAGTGGGAGAAGACGTGATAAGGTTTATGAGTTGGTAGGTCTAACAGAACTTTATTAT
GCCGGTAGCCATGGTATGGACATCATGCTGCCAATCAAGAATACGTTGTCTGCTAACGAT
TCAAATTGTATCAAAGATACTGACCAGCAGGGCAAGGAAGTCAATCTGTTCCAGCCTGCT
CGTAAATTTTTATCAATGATTGATGAGGTTTTTAAAACCCTTGTCGAGAAAACTAAAGAC
ATTAAGGGTGCAAAAGTTGAGCACCATAAGTTTTGTGCCTCTGTACATTACCGTAATGTA
GATGAGAATAATTGGTCTCTCATTGCACAATATGTCCATGATGTCTTGAAAGACTACCCT
CGGCTACGGCTAACTCATGGGAGAAAGGTTTTAGAGGTCCGTCCTGATATTGACTGGGAC
AAAGGAAAAGCAGTTGAATTTCTGCTGCAATCACTAGGTTTTAGTACCCCCAGAGACGTG
CTCCCGATATATATTGGAGATGATAGAACAGACGAAGACGCATTCAAGGTATTGAGGGGG
AAATATAAAGGGTATGGAATTCTTGTTTCAACTACCCCAAAAGAGAGTAACGCATCCTTT
TCTCTCAAGGATACTTCACAGGTGAAGAAGTTCTTGGAATGTCTTGCGAAAACGATGGAA
GTTGATGAGATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400008495
PEP Infomation

pacid=37467977 transcript=PGSC0003DMT400012219 locus=PGSC0003DMG400004792 ID=PGSC0003DMT400012219.v4.03 annot-version=v4.03
Sequence

MDLNSAQASPVLTDPSPLNKSRLGIHSSLFPYSQSGPSFSTSVLSIPRKKPAKLDDVRSN
GWLDAMKSSSPPRKKILKDVNIDVSSDDADVTYLSWMIKYPSALNCFQQIMRQARNKQIV
IFLDYDGTLSPIVDDPDRAFMSNEMRSVVSNVAKYFPTTIISGRRRDKVYELVGLTELYY
AGSHGMDIMLPIKNTLSANDSNCIKDTDQQGKEVNLFQPARKFLSMIDEVFKTLVEKTKD
IKGAKVEHHKFCASVHYRNVDENNWSLIAQYVHDVLKDYPRLRLTHGRKVLEVRPDIDWD
KGKAVEFLLQSLGFSTPRDVLPIYIGDDRTDEDAFKVLRGKYKGYGILVSTTPKESNASF
SLKDTSQVKKFLECLAKTMEVDEI*

Transcript Sequence

Transcript ID

PGSC0003DMT400012219
Transcript Infomation

pacid=37467977 locus=PGSC0003DMG400004792 ID=PGSC0003DMT400012219.v4.03 annot-version=v4.03
Sequence

ATGGACTTGAATTCGGCACAAGCTTCTCCAGTTCTTACTGATCCTTCACCGTTGAACAAG
TCCAGATTGGGAATCCATTCTAGTTTATTTCCTTATTCACAATCTGGGCCTTCATTCTCC
ACTAGCGTGCTATCAATTCCTAGAAAGAAGCCAGCGAAGCTTGATGATGTTCGATCCAAT
GGTTGGCTTGACGCAATGAAGTCGTCTTCACCTCCTAGGAAGAAGATTCTGAAGGATGTA
AACATTGATGTTTCTTCTGATGATGCTGATGTTACTTACCTTTCTTGGATGATAAAGTAT
CCATCAGCTCTCAACTGCTTTCAGCAAATTATGAGGCAAGCAAGGAATAAACAGATAGTG
ATTTTCTTAGATTATGATGGGACTCTTTCTCCTATCGTTGATGACCCTGACCGTGCTTTT
ATGTCCAATGAGATGCGCTCTGTTGTCAGTAATGTTGCAAAGTATTTCCCAACAACAATC
ATCAGTGGGAGAAGACGTGATAAGGTTTATGAGTTGGTAGGTCTAACAGAACTTTATTAT
GCCGGTAGCCATGGTATGGACATCATGCTGCCAATCAAGAATACGTTGTCTGCTAACGAT
TCAAATTGTATCAAAGATACTGACCAGCAGGGCAAGGAAGTCAATCTGTTCCAGCCTGCT
CGTAAATTTTTATCAATGATTGATGAGGTTTTTAAAACCCTTGTCGAGAAAACTAAAGAC
ATTAAGGGTGCAAAAGTTGAGCACCATAAGTTTTGTGCCTCTGTACATTACCGTAATGTA
GATGAGAATAATTGGTCTCTCATTGCACAATATGTCCATGATGTCTTGAAAGACTACCCT
CGGCTACGGCTAACTCATGGGAGAAAGGTTTTAGAGGTCCGTCCTGATATTGACTGGGAC
AAAGGAAAAGCAGTTGAATTTCTGCTGCAATCACTAGGTTTTAGTACCCCCAGAGACGTG
CTCCCGATATATATTGGAGATGATAGAACAGACGAAGACGCATTCAAGGTATTGAGGGGG
AAATATAAAGGGTATGGAATTCTTGTTTCAACTACCCCAAAAGAGAGTAACGCATCCTTT
TCTCTCAAGGATACTTCACAGGTGAAGAAGTTCTTGGAATGTCTTGCGAAAACGATGGAA
GTTGATGAGATATAA