Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012218
CDS Infomation

pacid=37470851 polypeptide=PGSC0003DMP400008494 locus=PGSC0003DMG400004791 ID=PGSC0003DMT400012218.v4.03 annot-version=v4.03
Sequence

ATGTCATCCTCTTTGCATTCTCCGCTATACTCCTCTCTCTCATCTTCCTCGGCTCTCCAG
GACAGAAAGCTGATAAATGCAGTTAATTTTGCGAAGCCGAATTTGATTTTCAAGCCTCGC
CGATCGTTTCCTCTAATCCGAGCTTCCGCTGGCTTCTCTTCATCTCTCGATACAGGTTTG
AGTACTGAATTGGATGCTGTAGCAAGTCATAGTGAGATCGTTCCAGATACAGTCATTTTC
GATGATTTCGAGAAATTTCCTCCAACTGCTGGTACTGTAAGCTCTTCTCTGCTCTTAGGC
ATATGCGGTCTTCCTGATACAAAATTTAAGAGTGCTGTAGACAGAGCTTTATCAGATTCT
GAGTGTTATGGATTGGAAAGTTCTGATCTTCAGATGTCTTGTTTTTTCAACAAGGCTTTA
GCACACGTTGGTGGTGATCTAGCAAAGCTTGTGCCTGGTCGAGTTTCTACTGAAGTGGAT
GCTCGCCTCGCATACGACACACATGGCATTGTGCGAAAGGTGCATGACCTTTTGAAAGCC
TATACCGAAATTGAAGTGCCTCCAGAAAGATTGCTGTTCAAAATTCCTGCAACTTGGCAA
GGAATTGAGGCATCAAGGGTGCTCGAAGCTGAGGGTATACAGACACATTTAACTTTTGTT
TACAGCTTTTGTCAAGCTGCTGCTGCTGCTCAAGCTGGTGCTTCTGTCATTCAGATTTTT
GTTGGTCGCCTGAGGGATTGGTCTCGCAATCACACTGGTGACTCTGAAGTTGAAAGTGCT
CTTAGAAGAGGAGAAGACCCAGGGTTGGCTTTGGTAACAAAAGCTTATAATTACATCCAC
AAGTATGGGCACAAGACAAAGTTGATGGCTGCAGCAGTACGGAACAAGCAGGATGTCTTC
AACCTTTTGGGGGTGGATTACATTATTACCCCACTGAAGGTATTGCAATCTCTTAAAGAA
TCAGTGACCCTACCTGATGAGAAGTACTCATTTACTAGAAGGTTATCCCCACAATCCGCT
GCTACCTTCAATTTCACTCAAGATGAGCTTCAAAAGTGGGATCAGTATAGCTTTTCCTCG
GCTATGGGTCCTGCATCGGTGGAGCTCCTCACTATTGGAATGGATGGGTATACTAATCAG
GCTAAGCGGGTTGAAGAATTGTTTGGCAAGATATGGCCACCACCAAATGTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400008494
PEP Infomation

pacid=37470851 transcript=PGSC0003DMT400012218 locus=PGSC0003DMG400004791 ID=PGSC0003DMT400012218.v4.03 annot-version=v4.03
Sequence

MSSSLHSPLYSSLSSSSALQDRKLINAVNFAKPNLIFKPRRSFPLIRASAGFSSSLDTGL
STELDAVASHSEIVPDTVIFDDFEKFPPTAGTVSSSLLLGICGLPDTKFKSAVDRALSDS
ECYGLESSDLQMSCFFNKALAHVGGDLAKLVPGRVSTEVDARLAYDTHGIVRKVHDLLKA
YTEIEVPPERLLFKIPATWQGIEASRVLEAEGIQTHLTFVYSFCQAAAAAQAGASVIQIF
VGRLRDWSRNHTGDSEVESALRRGEDPGLALVTKAYNYIHKYGHKTKLMAAAVRNKQDVF
NLLGVDYIITPLKVLQSLKESVTLPDEKYSFTRRLSPQSAATFNFTQDELQKWDQYSFSS
AMGPASVELLTIGMDGYTNQAKRVEELFGKIWPPPNV*

Transcript Sequence

Transcript ID

PGSC0003DMT400012218
Transcript Infomation

pacid=37470851 locus=PGSC0003DMG400004791 ID=PGSC0003DMT400012218.v4.03 annot-version=v4.03
Sequence

ATGTCATCCTCTTTGCATTCTCCGCTATACTCCTCTCTCTCATCTTCCTCGGCTCTCCAG
GACAGAAAGCTGATAAATGCAGTTAATTTTGCGAAGCCGAATTTGATTTTCAAGCCTCGC
CGATCGTTTCCTCTAATCCGAGCTTCCGCTGGCTTCTCTTCATCTCTCGATACAGGTTTG
AGTACTGAATTGGATGCTGTAGCAAGTCATAGTGAGATCGTTCCAGATACAGTCATTTTC
GATGATTTCGAGAAATTTCCTCCAACTGCTGGTACTGTAAGCTCTTCTCTGCTCTTAGGC
ATATGCGGTCTTCCTGATACAAAATTTAAGAGTGCTGTAGACAGAGCTTTATCAGATTCT
GAGTGTTATGGATTGGAAAGTTCTGATCTTCAGATGTCTTGTTTTTTCAACAAGGCTTTA
GCACACGTTGGTGGTGATCTAGCAAAGCTTGTGCCTGGTCGAGTTTCTACTGAAGTGGAT
GCTCGCCTCGCATACGACACACATGGCATTGTGCGAAAGGTGCATGACCTTTTGAAAGCC
TATACCGAAATTGAAGTGCCTCCAGAAAGATTGCTGTTCAAAATTCCTGCAACTTGGCAA
GGAATTGAGGCATCAAGGGTGCTCGAAGCTGAGGGTATACAGACACATTTAACTTTTGTT
TACAGCTTTTGTCAAGCTGCTGCTGCTGCTCAAGCTGGTGCTTCTGTCATTCAGATTTTT
GTTGGTCGCCTGAGGGATTGGTCTCGCAATCACACTGGTGACTCTGAAGTTGAAAGTGCT
CTTAGAAGAGGAGAAGACCCAGGGTTGGCTTTGGTAACAAAAGCTTATAATTACATCCAC
AAGTATGGGCACAAGACAAAGTTGATGGCTGCAGCAGTACGGAACAAGCAGGATGTCTTC
AACCTTTTGGGGGTGGATTACATTATTACCCCACTGAAGGTATTGCAATCTCTTAAAGAA
TCAGTGACCCTACCTGATGAGAAGTACTCATTTACTAGAAGGTTATCCCCACAATCCGCT
GCTACCTTCAATTTCACTCAAGATGAGCTTCAAAAGTGGGATCAGTATAGCTTTTCCTCG
GCTATGGGTCCTGCATCGGTGGAGCTCCTCACTATTGGAATGGATGGGTATACTAATCAG
GCTAAGCGGGTTGAAGAATTGTTTGGCAAGATATGGCCACCACCAAATGTATGA