Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012216
CDS Infomation

pacid=37467878 polypeptide=PGSC0003DMP400008492 locus=PGSC0003DMG400004789 ID=PGSC0003DMT400012216.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCTTCTTCTTCTTCTACTTCTACTTGGTCTTTCTTAATTACCCTTATCTGC
ATTTTCTTGTTTATGGGGTTAAGTTTTGCTGGAGATCCATTTAAGTTTTTTAACTTTGAG
GTCTCTTACATTGATGCTTCTCCACTTGGGGTGTCTCAACAGGTTATTGCTATTAATGGA
AAGTTTCCTGGACCAACTATGAATGTAACTACTAATGACAATGTTGTTGTTAATGTGAGG
AACAAATTAGATGAAGAACTTCTCTTACATTGGTCTGGGGTTCAGCAGAAGAGGAGTACC
TGGCAAGATGGTCTACCAGGAACAAACTGTCCTATTCCTCCAAAGTGGAACTGGACTTAC
CAATTTCAGGTCAAGGACCAAATTGGAAGTTTCTTTTATTTCCCTTCTCTGCATTTTCAG
AGAGCATCAGGGGGTTTTGGTGGAATTACTATTAATAACAGGGAGGAAATCCCAATTCCT
TTTGATTTACCATATGATGATATAACTATTATGATTGGTGATTGGTACACCAGAAATCAC
ACGTCTTTGAGGAGCACTCTTCTTGCTGGCAAAGATCTAGGAAAACCAGATGGTGTTTTA
ATTAATGGAAAAGGTCCTTACAGATATAATGATACTATTGTGCCTGATGGCATTGACTAT
GAAACAATCACTGTCCATCCAGGCAAAACCTATCGAATTCGTGTAAGCAATGTAGGAATA
TCAACCAGCTTGAACTTCAGAATTCAGAATCATAACTTACTTTTGGCAGAAGCAGAGGGA
TCATACACTGTGCAGCAAAATTATACTAGCTTAGATATACATGTTGGACAATCTTACTCT
TTTTTGGTATCCATGGATCAGAATGCAAGTTCTGATTACTACATTGTGGCAAGTGCCAGA
TTTGTGAACCAATCACAATGGCAAAGAGTCACTGGTGTAGGCATTTTGAAATATACAAAC
TCGAAAGGAAAGGCACACGGCCCTCTTCCTGAACCACCACAAGATGAATTCGACAAAACT
TTCTCCATGAACCAGGCGAGATCTATTAGGTGGAATGTAACTGCCAGCGGAGCTCGCCCA
AATCCTCAAGGTTCTTTCAGATATGGCTCAATTAATGTGACAGAGATATACGTGGTCCAA
AATACGCCGCCACAGATGGTAGATGGAAAAAGGAGAACAACACTTAATGGGATTTCATTT
GTTAATCCTAAAACACCAATCAGACTTGCTGACCAGTACAAATTAAAGGGTGTATATAAA
CTAGATTTCCCTACGGCACCACTAACCGGACCTCCTAAGATGGAAACCTCTATTATCAAT
GGTACCTACAGGGGATTTATGGAAATAATATTACAGAATAATGATACCAAAATGCACACA
TACCATATGAGTGGATATGCCGTTTTTGTGGTCGGGATGGATTTTGGCGTGTGGTCAAAT
AATAGTAGGGGTACTTACAACAAATGGGATGGAATAGCTCGCACCACAACACAGGTTTTC
CCCGGGGCATGGACAGCAATCTTGGTCTCCCTTGACAATGTTGGAGTTTGGAACCTGAGG
ACAGAAAACCTCGACTCGTGGTTTCTAGGACAAGAAACATACATCAGGGTTGTTAACTCC
GAGCCTACTAACAAGACAGAGTTGCCAATGCCAGACAATACTCTCTTCTGTGGTCAACTT
GGCAAACTACAAAAGCCACAAGATATATCATATGCAACATCCATGAGAGGCAACGGATCG
AAATTCTCCTTCATGATTATCATGCTGGTATCCGCGATATTCGTTGTGTTCCAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400008492
PEP Infomation

pacid=37467878 transcript=PGSC0003DMT400012216 locus=PGSC0003DMG400004789 ID=PGSC0003DMT400012216.v4.03 annot-version=v4.03
Sequence

MASSSSSSTSTWSFLITLICIFLFMGLSFAGDPFKFFNFEVSYIDASPLGVSQQVIAING
KFPGPTMNVTTNDNVVVNVRNKLDEELLLHWSGVQQKRSTWQDGLPGTNCPIPPKWNWTY
QFQVKDQIGSFFYFPSLHFQRASGGFGGITINNREEIPIPFDLPYDDITIMIGDWYTRNH
TSLRSTLLAGKDLGKPDGVLINGKGPYRYNDTIVPDGIDYETITVHPGKTYRIRVSNVGI
STSLNFRIQNHNLLLAEAEGSYTVQQNYTSLDIHVGQSYSFLVSMDQNASSDYYIVASAR
FVNQSQWQRVTGVGILKYTNSKGKAHGPLPEPPQDEFDKTFSMNQARSIRWNVTASGARP
NPQGSFRYGSINVTEIYVVQNTPPQMVDGKRRTTLNGISFVNPKTPIRLADQYKLKGVYK
LDFPTAPLTGPPKMETSIINGTYRGFMEIILQNNDTKMHTYHMSGYAVFVVGMDFGVWSN
NSRGTYNKWDGIARTTTQVFPGAWTAILVSLDNVGVWNLRTENLDSWFLGQETYIRVVNS
EPTNKTELPMPDNTLFCGQLGKLQKPQDISYATSMRGNGSKFSFMIIMLVSAIFVVFQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400012216
Transcript Infomation

pacid=37467878 locus=PGSC0003DMG400004789 ID=PGSC0003DMT400012216.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCTTCTTCTTCTTCTACTTCTACTTGGTCTTTCTTAATTACCCTTATCTGC
ATTTTCTTGTTTATGGGGTTAAGTTTTGCTGGAGATCCATTTAAGTTTTTTAACTTTGAG
GTCTCTTACATTGATGCTTCTCCACTTGGGGTGTCTCAACAGGTTATTGCTATTAATGGA
AAGTTTCCTGGACCAACTATGAATGTAACTACTAATGACAATGTTGTTGTTAATGTGAGG
AACAAATTAGATGAAGAACTTCTCTTACATTGGTCTGGGGTTCAGCAGAAGAGGAGTACC
TGGCAAGATGGTCTACCAGGAACAAACTGTCCTATTCCTCCAAAGTGGAACTGGACTTAC
CAATTTCAGGTCAAGGACCAAATTGGAAGTTTCTTTTATTTCCCTTCTCTGCATTTTCAG
AGAGCATCAGGGGGTTTTGGTGGAATTACTATTAATAACAGGGAGGAAATCCCAATTCCT
TTTGATTTACCATATGATGATATAACTATTATGATTGGTGATTGGTACACCAGAAATCAC
ACGTCTTTGAGGAGCACTCTTCTTGCTGGCAAAGATCTAGGAAAACCAGATGGTGTTTTA
ATTAATGGAAAAGGTCCTTACAGATATAATGATACTATTGTGCCTGATGGCATTGACTAT
GAAACAATCACTGTCCATCCAGGCAAAACCTATCGAATTCGTGTAAGCAATGTAGGAATA
TCAACCAGCTTGAACTTCAGAATTCAGAATCATAACTTACTTTTGGCAGAAGCAGAGGGA
TCATACACTGTGCAGCAAAATTATACTAGCTTAGATATACATGTTGGACAATCTTACTCT
TTTTTGGTATCCATGGATCAGAATGCAAGTTCTGATTACTACATTGTGGCAAGTGCCAGA
TTTGTGAACCAATCACAATGGCAAAGAGTCACTGGTGTAGGCATTTTGAAATATACAAAC
TCGAAAGGAAAGGCACACGGCCCTCTTCCTGAACCACCACAAGATGAATTCGACAAAACT
TTCTCCATGAACCAGGCGAGATCTATTAGGTGGAATGTAACTGCCAGCGGAGCTCGCCCA
AATCCTCAAGGTTCTTTCAGATATGGCTCAATTAATGTGACAGAGATATACGTGGTCCAA
AATACGCCGCCACAGATGGTAGATGGAAAAAGGAGAACAACACTTAATGGGATTTCATTT
GTTAATCCTAAAACACCAATCAGACTTGCTGACCAGTACAAATTAAAGGGTGTATATAAA
CTAGATTTCCCTACGGCACCACTAACCGGACCTCCTAAGATGGAAACCTCTATTATCAAT
GGTACCTACAGGGGATTTATGGAAATAATATTACAGAATAATGATACCAAAATGCACACA
TACCATATGAGTGGATATGCCGTTTTTGTGGTCGGGATGGATTTTGGCGTGTGGTCAAAT
AATAGTAGGGGTACTTACAACAAATGGGATGGAATAGCTCGCACCACAACACAGGTTTTC
CCCGGGGCATGGACAGCAATCTTGGTCTCCCTTGACAATGTTGGAGTTTGGAACCTGAGG
ACAGAAAACCTCGACTCGTGGTTTCTAGGACAAGAAACATACATCAGGGTTGTTAACTCC
GAGCCTACTAACAAGACAGAGTTGCCAATGCCAGACAATACTCTCTTCTGTGGTCAACTT
GGCAAACTACAAAAGCCACAAGATATATCATATGCAACATCCATGAGAGGCAACGGATCG
AAATTCTCCTTCATGATTATCATGCTGGTATCCGCGATATTCGTTGTGTTCCAGTAG