Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012190
CDS Infomation

pacid=37468172 polypeptide=PGSC0003DMP400008474 locus=PGSC0003DMG400004778 ID=PGSC0003DMT400012190.v4.03 annot-version=v4.03
Sequence

ATGTCTCTCAAATTCTTCAAACCCCTTTTTGATTCTTTCCCATGGCCCCTTCAACAACTC
AATGTTGAGCAAAAGGGTGTGTTTTTCTCCTGTTTTCTTGCTTTTTTAGCTTTACTTTGG
TTTTTCATCAGTAACTCAAACAAGAGATTGCCACCAGGGCCTAAAGCTTTTCCCTTGATA
GGTAATCTCCATTCTCTTGATCCTGAACTACACACCTATTTTGCATCTCTGTCCCAAACT
TATGGCCCCATTTGTAGAATCTGGCTTGGTAAAAAACTTGGGATTATTATTACTTCCCCT
GCTTTAGCTCGCGAGGTTCTTAAGGATAAAGATACCATTTTTGCAAACAGAGATGTCCCT
GCTGCTGGAAGCGAATTTTCATATGGTGGCAATAATGTACTTTGGACTCCTTATGGACCG
AAATGGCGCATGTTGAGGAAGGTTTGTGTTCGCGATATGCTTAATTCTTCTACTTTAGAT
TCGGTTTATGCACTAAGGAGAAGGGAGCTTAGACAATCGATTAATTACTTCTATAGTAAG
AAGGGTTTACCAGTGAATGTTGGTGAGCAGATGTTCTTGACTATACTTAATGTGATTACA
AGCATGTTATGGGGTGGCACAGTGAAGGGTGAGGAAAGAGCTAGTCTTGGAGCTGAGTTT
AGGCTTGTTGTGACTGAGATAGCTAAGTTGGTCAGTATTCCCAACCTTTCCGATTTTTAC
CCGGGCTTGGCTTGGTTTGATTTCCAGGGTGTTATAAAGAAGATGAAGTTGTTGGCAAAG
AGATTTGATAAGATATTTGAGAGCATGATTGATCAAAGACAAAAATTGGACAGAAATGGT
GTTGGCCAAGAAAGCAAGGACTTTTTGCAAGTTTTGCTGAAGTTGAAAGATGAAGCAGAT
CCCGAAATGCCTCTGACCATGACTGAAATCAAAGCCTTACTTATGGAAATGGTTCTCGGT
GGAACTGACACTTCCGTCAACACAATTGAGTTTGCCATGGCTGAAATTATGCACAAACCC
GATGTCCTGAGGAAATTACAACAAGAAGTAGATACAGCTGTGGGAAAAGATAATATTGTG
GAAGAGTCTCATATTCAGCAATTACCATATCTCTATGCAGTGATGAAAGAAGTGTTGCGC
CTACATCCAGCTGCTCCACTATTGATACCACATTGTCCTAGTGAAACATGCACTGTGGGA
GGTTACACTGTTCCTAAAGGATCTTGTATTTTCATAAATGTATGGGCTATTCAGAGAGAT
GCTTCTATATGGAAAAATCCAACAGAGTTCCGTCCAGAGAGATTTTTGGACAATAAATGG
GATTATAGTGGAAAAGATTTGAACTATTTCCCATTTGGTTCTGGCAGAAGAATTTGTGCG
GGGATAGGCATGGCAGAGAGGATGTTCCTGTATTCACTGGCTTCACTCATTCATTCTTTT
GATTGGAAATTGCCCGAAGGAGTGACATCAGACGTTACAGAGATGTTTGGTATTACTTTG
AGGAAGAAAATTCCTCTGGTGGCTATACCTACTCCAAGATTGTCCAATCCAACACTGTAT
GAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008474
PEP Infomation

pacid=37468172 transcript=PGSC0003DMT400012190 locus=PGSC0003DMG400004778 ID=PGSC0003DMT400012190.v4.03 annot-version=v4.03
Sequence

MSLKFFKPLFDSFPWPLQQLNVEQKGVFFSCFLAFLALLWFFISNSNKRLPPGPKAFPLI
GNLHSLDPELHTYFASLSQTYGPICRIWLGKKLGIIITSPALAREVLKDKDTIFANRDVP
AAGSEFSYGGNNVLWTPYGPKWRMLRKVCVRDMLNSSTLDSVYALRRRELRQSINYFYSK
KGLPVNVGEQMFLTILNVITSMLWGGTVKGEERASLGAEFRLVVTEIAKLVSIPNLSDFY
PGLAWFDFQGVIKKMKLLAKRFDKIFESMIDQRQKLDRNGVGQESKDFLQVLLKLKDEAD
PEMPLTMTEIKALLMEMVLGGTDTSVNTIEFAMAEIMHKPDVLRKLQQEVDTAVGKDNIV
EESHIQQLPYLYAVMKEVLRLHPAAPLLIPHCPSETCTVGGYTVPKGSCIFINVWAIQRD
ASIWKNPTEFRPERFLDNKWDYSGKDLNYFPFGSGRRICAGIGMAERMFLYSLASLIHSF
DWKLPEGVTSDVTEMFGITLRKKIPLVAIPTPRLSNPTLYE*

Transcript Sequence

Transcript ID

PGSC0003DMT400012190
Transcript Infomation

pacid=37468172 locus=PGSC0003DMG400004778 ID=PGSC0003DMT400012190.v4.03 annot-version=v4.03
Sequence

ATGTCTCTCAAATTCTTCAAACCCCTTTTTGATTCTTTCCCATGGCCCCTTCAACAACTC
AATGTTGAGCAAAAGGGTGTGTTTTTCTCCTGTTTTCTTGCTTTTTTAGCTTTACTTTGG
TTTTTCATCAGTAACTCAAACAAGAGATTGCCACCAGGGCCTAAAGCTTTTCCCTTGATA
GGTAATCTCCATTCTCTTGATCCTGAACTACACACCTATTTTGCATCTCTGTCCCAAACT
TATGGCCCCATTTGTAGAATCTGGCTTGGTAAAAAACTTGGGATTATTATTACTTCCCCT
GCTTTAGCTCGCGAGGTTCTTAAGGATAAAGATACCATTTTTGCAAACAGAGATGTCCCT
GCTGCTGGAAGCGAATTTTCATATGGTGGCAATAATGTACTTTGGACTCCTTATGGACCG
AAATGGCGCATGTTGAGGAAGGTTTGTGTTCGCGATATGCTTAATTCTTCTACTTTAGAT
TCGGTTTATGCACTAAGGAGAAGGGAGCTTAGACAATCGATTAATTACTTCTATAGTAAG
AAGGGTTTACCAGTGAATGTTGGTGAGCAGATGTTCTTGACTATACTTAATGTGATTACA
AGCATGTTATGGGGTGGCACAGTGAAGGGTGAGGAAAGAGCTAGTCTTGGAGCTGAGTTT
AGGCTTGTTGTGACTGAGATAGCTAAGTTGGTCAGTATTCCCAACCTTTCCGATTTTTAC
CCGGGCTTGGCTTGGTTTGATTTCCAGGGTGTTATAAAGAAGATGAAGTTGTTGGCAAAG
AGATTTGATAAGATATTTGAGAGCATGATTGATCAAAGACAAAAATTGGACAGAAATGGT
GTTGGCCAAGAAAGCAAGGACTTTTTGCAAGTTTTGCTGAAGTTGAAAGATGAAGCAGAT
CCCGAAATGCCTCTGACCATGACTGAAATCAAAGCCTTACTTATGGAAATGGTTCTCGGT
GGAACTGACACTTCCGTCAACACAATTGAGTTTGCCATGGCTGAAATTATGCACAAACCC
GATGTCCTGAGGAAATTACAACAAGAAGTAGATACAGCTGTGGGAAAAGATAATATTGTG
GAAGAGTCTCATATTCAGCAATTACCATATCTCTATGCAGTGATGAAAGAAGTGTTGCGC
CTACATCCAGCTGCTCCACTATTGATACCACATTGTCCTAGTGAAACATGCACTGTGGGA
GGTTACACTGTTCCTAAAGGATCTTGTATTTTCATAAATGTATGGGCTATTCAGAGAGAT
GCTTCTATATGGAAAAATCCAACAGAGTTCCGTCCAGAGAGATTTTTGGACAATAAATGG
GATTATAGTGGAAAAGATTTGAACTATTTCCCATTTGGTTCTGGCAGAAGAATTTGTGCG
GGGATAGGCATGGCAGAGAGGATGTTCCTGTATTCACTGGCTTCACTCATTCATTCTTTT
GATTGGAAATTGCCCGAAGGAGTGACATCAGACGTTACAGAGATGTTTGGTATTACTTTG
AGGAAGAAAATTCCTCTGGTGGCTATACCTACTCCAAGATTGTCCAATCCAACACTGTAT
GAGTAA