Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012187
CDS Infomation

pacid=37468755 polypeptide=PGSC0003DMP400008473 locus=PGSC0003DMG400004777 ID=PGSC0003DMT400012187.v4.03 annot-version=v4.03
Sequence

ATGTCTCTCGAATTCTTCAAACCTCTTTTTGATTCTTTCCCATGGCTCCTTCAACAACTC
AATGTTGAGCAAAAGGCTGTGATTTTCTCCTGTTTTCTTGGGTTTTTAGCTTTACTTTGG
TTTTTCATCAGTAACTCAAACAAGGGACTGCCACCAGGGCCTAAACCTTTGCCCTTGGTA
GGTAATCTCCATTCTCTTGATCCTCAACTTCACACCTATTTTGCATCTCTGTCCCAAACT
TATGGCCCCATTTGTAGACTCTGGCTTGGTAAAAAAGTTGGGATTATTATTACTTCACCA
GCCTTAGCTCGCGAGGTTCTTAAGGATAAAGATACCATTTTTGCTAACAGAGATGTCCCT
GCTGCTGGAAGAGAATTTTCATACGGTGTCAATGACTTACTTTGGACTCCTTATGGACCG
AAATGGCGAATGTTGAGGAAGGTTTGTGTTCGCGATATGCTTAGTTGTTCTACATTAGAT
TCTGTTTATGCACTAAGGAAAAGGGAGCTTAGACAATCGATCAAATACTTGTATAGTCAG
AAGGGTTTACCGGTGAATGTTGGTGAACAGATGTTCTTGACTGTGCTTAATGTGATTACA
AGCATGTTATGGGGTGGCACAATGAAGGGTGAGGAAAGAGCTAGTGTTGGAGCTGAGTTT
AGGCATGTTGTGACCGAGATAGCTGAGTTGATCAGTATTCCCAATCTTTCCGATTTTTAC
CCAGGCATGGCTTGGTTTGATTTCCAGGGTGTTGTAAAGAAGATGAAGGTGGTTCTAAAG
AGATTTGATAAGATATTTGAAACCATGATTGATCAAAGACAAAAATTGGACAGAAATGGT
GTTGGCCAAGAAAGCAAAGACTTTCTGCAAGTTTTGCTGAAGTTGAAAGATGAAGCAGAT
CCCAAAATGCCTCTGACCATGACTGAAATCAAAGCCTTACTTATGGATATGGTTACTGGT
GGAGCTAGCTCAACGTCCAATGCGATTGAGTTTGCCATGGCTGAAATTATGAACAAACCA
GACGTCCTGAGGAAATTACAACAAGAACTAGAGACAGTTGTGGGAAAAGATAATATTGTG
GAAGAGTCTCATATTAAGGAATTACCATATCTTTATGCAGTTATGAAAGAAGTCTTGCGC
ATACATCCAACTGCTCCACTATTGGTGCCACATTGTCCTAGTGAAACATGCACTGTGGGA
GGGTACACTGTTCCTAAAGGATCTTGTGTTTTCATAAATGTATGGGCTATACACAGAGAT
CCTTCTATCTGGAAAAATCCAACTGAGTTCCGTCCAGAGAGATTTTTGGACAATAAATGG
GATTATAGTGGAAATGATTTCAACTATTTCCCATTTGGTTCTGGCAGAAGAATCTGTGTG
GGGATAGACATGGCAGAGAGGATGTTCATGTATTCACTTGCTTCACTGGTTCATTCTTTC
GACTGGAAATTGCCTGAAGGAGAGACATTAGAAGTTACAGAGAAGTTCGGTATTATTTTG
AAGAAGAAAATGCCTCTGGTGGCTATACCGACTCCAAGATTGTCCAATCCAGCACTCTAT
GAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008473
PEP Infomation

pacid=37468755 transcript=PGSC0003DMT400012187 locus=PGSC0003DMG400004777 ID=PGSC0003DMT400012187.v4.03 annot-version=v4.03
Sequence

MSLEFFKPLFDSFPWLLQQLNVEQKAVIFSCFLGFLALLWFFISNSNKGLPPGPKPLPLV
GNLHSLDPQLHTYFASLSQTYGPICRLWLGKKVGIIITSPALAREVLKDKDTIFANRDVP
AAGREFSYGVNDLLWTPYGPKWRMLRKVCVRDMLSCSTLDSVYALRKRELRQSIKYLYSQ
KGLPVNVGEQMFLTVLNVITSMLWGGTMKGEERASVGAEFRHVVTEIAELISIPNLSDFY
PGMAWFDFQGVVKKMKVVLKRFDKIFETMIDQRQKLDRNGVGQESKDFLQVLLKLKDEAD
PKMPLTMTEIKALLMDMVTGGASSTSNAIEFAMAEIMNKPDVLRKLQQELETVVGKDNIV
EESHIKELPYLYAVMKEVLRIHPTAPLLVPHCPSETCTVGGYTVPKGSCVFINVWAIHRD
PSIWKNPTEFRPERFLDNKWDYSGNDFNYFPFGSGRRICVGIDMAERMFMYSLASLVHSF
DWKLPEGETLEVTEKFGIILKKKMPLVAIPTPRLSNPALYE*

Transcript Sequence

Transcript ID

PGSC0003DMT400012187
Transcript Infomation

pacid=37468755 locus=PGSC0003DMG400004777 ID=PGSC0003DMT400012187.v4.03 annot-version=v4.03
Sequence

ATGTCTCTCGAATTCTTCAAACCTCTTTTTGATTCTTTCCCATGGCTCCTTCAACAACTC
AATGTTGAGCAAAAGGCTGTGATTTTCTCCTGTTTTCTTGGGTTTTTAGCTTTACTTTGG
TTTTTCATCAGTAACTCAAACAAGGGACTGCCACCAGGGCCTAAACCTTTGCCCTTGGTA
GGTAATCTCCATTCTCTTGATCCTCAACTTCACACCTATTTTGCATCTCTGTCCCAAACT
TATGGCCCCATTTGTAGACTCTGGCTTGGTAAAAAAGTTGGGATTATTATTACTTCACCA
GCCTTAGCTCGCGAGGTTCTTAAGGATAAAGATACCATTTTTGCTAACAGAGATGTCCCT
GCTGCTGGAAGAGAATTTTCATACGGTGTCAATGACTTACTTTGGACTCCTTATGGACCG
AAATGGCGAATGTTGAGGAAGGTTTGTGTTCGCGATATGCTTAGTTGTTCTACATTAGAT
TCTGTTTATGCACTAAGGAAAAGGGAGCTTAGACAATCGATCAAATACTTGTATAGTCAG
AAGGGTTTACCGGTGAATGTTGGTGAACAGATGTTCTTGACTGTGCTTAATGTGATTACA
AGCATGTTATGGGGTGGCACAATGAAGGGTGAGGAAAGAGCTAGTGTTGGAGCTGAGTTT
AGGCATGTTGTGACCGAGATAGCTGAGTTGATCAGTATTCCCAATCTTTCCGATTTTTAC
CCAGGCATGGCTTGGTTTGATTTCCAGGGTGTTGTAAAGAAGATGAAGGTGGTTCTAAAG
AGATTTGATAAGATATTTGAAACCATGATTGATCAAAGACAAAAATTGGACAGAAATGGT
GTTGGCCAAGAAAGCAAAGACTTTCTGCAAGTTTTGCTGAAGTTGAAAGATGAAGCAGAT
CCCAAAATGCCTCTGACCATGACTGAAATCAAAGCCTTACTTATGGATATGGTTACTGGT
GGAGCTAGCTCAACGTCCAATGCGATTGAGTTTGCCATGGCTGAAATTATGAACAAACCA
GACGTCCTGAGGAAATTACAACAAGAACTAGAGACAGTTGTGGGAAAAGATAATATTGTG
GAAGAGTCTCATATTAAGGAATTACCATATCTTTATGCAGTTATGAAAGAAGTCTTGCGC
ATACATCCAACTGCTCCACTATTGGTGCCACATTGTCCTAGTGAAACATGCACTGTGGGA
GGGTACACTGTTCCTAAAGGATCTTGTGTTTTCATAAATGTATGGGCTATACACAGAGAT
CCTTCTATCTGGAAAAATCCAACTGAGTTCCGTCCAGAGAGATTTTTGGACAATAAATGG
GATTATAGTGGAAATGATTTCAACTATTTCCCATTTGGTTCTGGCAGAAGAATCTGTGTG
GGGATAGACATGGCAGAGAGGATGTTCATGTATTCACTTGCTTCACTGGTTCATTCTTTC
GACTGGAAATTGCCTGAAGGAGAGACATTAGAAGTTACAGAGAAGTTCGGTATTATTTTG
AAGAAGAAAATGCCTCTGGTGGCTATACCGACTCCAAGATTGTCCAATCCAGCACTCTAT
GAGTAA