Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012165
CDS Infomation

pacid=37467649 polypeptide=PGSC0003DMP400008464 locus=PGSC0003DMG400004769 ID=PGSC0003DMT400012165.v4.03 annot-version=v4.03
Sequence

ATGAGGAAATTCTTGCGGCGAATAATTGCTGTTCTGATCTTCAGAGTTAACTGGAAGAAA
CTCTTTGTTGTAGGCACTATTTTAACAGTGTTTAGAGTTGTCTTTCAAATTTATAGTCTC
CCTAATCCTTTAACTGAATGGATTAGCTCTCCACCCTTGGATGTTTCATCTTACCAACGC
CTAATAAATCACGGAAACAAATCGAGGGAACTTGAACTTTCAGTAACATCTGATAACCAG
TTGAAAATGAGTAAGCATGTGCCCGCGGTTGTTTTACTCAACTCTACAGCCAGAACAAAC
CGATTGATGAGAGTTATGGAAAGACGAGCAAGACTTCTGAGGCGTAGGAGACGCAAGAAG
CAGGCACGTATAGTAGAAAAGATTGTTTATCCGCCTCCACCTGTTGTGCCTGATCACTTG
CAAAGATTTATCGCGTCGTTGACACCAAATGAGGCACTTGCATATGCTAGAAGGGAGATT
GAGCAAGCTCCTATAGTCACTGATGATCCAGACTTGTATGCTCCTCTTTTTAGGAATATT
TCCAACTTTAAAAGGAGCTATGAGATGATGGAACTTCTACTCAAAGTTTACATTTACGAT
GAAGGAGACAGGCCTATTTTCCACGAACCTCATCTTCTGGGAATTTATTCGTCTGAGGGA
TGGTTCATGAAATTGATGGAGGAAAATCCCTACTTTGTCACTAGGGACCCTGAGAAGGCT
CACCTATTCTATCTGCCATATAGTTCACGACAGTTGCAGATGGCAGTTTATGTGCCTGGC
TCGCATAATCTTAGGCCGTTGTCAGAATTCCTGCGAGACTATGTGAACATGCTAGCTGCA
AAGTATCCCTTCTGGAATCGTACACACGGAACAGATCACTTTATAGTTGCTTGCCATGAT
TGGGGGCCTTACATTTTAAAGGATCACGAGGAGCTAATTCGAAACACTATAAAAGCTCTC
TGCAATGCAGATATATCAGAAGGAATATTTAAAGCTGGAAAGGATGTTTCCCTTCCGGAG
ACCGCCATAAGGAATATCGGTAAGCCTCTAGTAAATGTTGGTGGAAAAAGAGTATCACAA
CGCCCTATCCTCGCCTTTTTTGCTGGAAATATGCACGGGCCAGTCCGTCCCAAACTCCTC
AAGTACTGGAGTGACCGAGATGAAGACATGAAAATTTACGGGCCTCTACCTACCAGTGTC
TCAAGAATAATGTCTTATCCCGACCACATGAAATCAAGCAAGTTCTGTCTTTGTCCAATG
GGTTTTGAAGTGAACAGTCCAAGGATCGTCGAGGCAATATACTACGAGTGTGTACCAGTG
ATCATTGCTGATAATCTTGCCCTCCCATTTGACGAAGTGCTTGATTGGAGTGCTTTCTCA
TTGATAGTTTCTGAGGAAGATATTCCTAAGCTGAAGGAGATTCTGTTGAGTATACCTTTA
AGACGTTATCAGGTGATGCAAAATAACGTCAAGAGGGTGCAGAAGCATTTTCATTGGAAT
GCAATGCCATTTAGATTTGATCTCTTCCATATGATTTTGCATTCCATTTGGTCTAGAAGA
CTCAACCAGTTTCAAGAATCACAGATATCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400008464
PEP Infomation

pacid=37467649 transcript=PGSC0003DMT400012165 locus=PGSC0003DMG400004769 ID=PGSC0003DMT400012165.v4.03 annot-version=v4.03
Sequence

MRKFLRRIIAVLIFRVNWKKLFVVGTILTVFRVVFQIYSLPNPLTEWISSPPLDVSSYQR
LINHGNKSRELELSVTSDNQLKMSKHVPAVVLLNSTARTNRLMRVMERRARLLRRRRRKK
QARIVEKIVYPPPPVVPDHLQRFIASLTPNEALAYARREIEQAPIVTDDPDLYAPLFRNI
SNFKRSYEMMELLLKVYIYDEGDRPIFHEPHLLGIYSSEGWFMKLMEENPYFVTRDPEKA
HLFYLPYSSRQLQMAVYVPGSHNLRPLSEFLRDYVNMLAAKYPFWNRTHGTDHFIVACHD
WGPYILKDHEELIRNTIKALCNADISEGIFKAGKDVSLPETAIRNIGKPLVNVGGKRVSQ
RPILAFFAGNMHGPVRPKLLKYWSDRDEDMKIYGPLPTSVSRIMSYPDHMKSSKFCLCPM
GFEVNSPRIVEAIYYECVPVIIADNLALPFDEVLDWSAFSLIVSEEDIPKLKEILLSIPL
RRYQVMQNNVKRVQKHFHWNAMPFRFDLFHMILHSIWSRRLNQFQESQIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400012165
Transcript Infomation

pacid=37467649 locus=PGSC0003DMG400004769 ID=PGSC0003DMT400012165.v4.03 annot-version=v4.03
Sequence

ATGAGGAAATTCTTGCGGCGAATAATTGCTGTTCTGATCTTCAGAGTTAACTGGAAGAAA
CTCTTTGTTGTAGGCACTATTTTAACAGTGTTTAGAGTTGTCTTTCAAATTTATAGTCTC
CCTAATCCTTTAACTGAATGGATTAGCTCTCCACCCTTGGATGTTTCATCTTACCAACGC
CTAATAAATCACGGAAACAAATCGAGGGAACTTGAACTTTCAGTAACATCTGATAACCAG
TTGAAAATGAGTAAGCATGTGCCCGCGGTTGTTTTACTCAACTCTACAGCCAGAACAAAC
CGATTGATGAGAGTTATGGAAAGACGAGCAAGACTTCTGAGGCGTAGGAGACGCAAGAAG
CAGGCACGTATAGTAGAAAAGATTGTTTATCCGCCTCCACCTGTTGTGCCTGATCACTTG
CAAAGATTTATCGCGTCGTTGACACCAAATGAGGCACTTGCATATGCTAGAAGGGAGATT
GAGCAAGCTCCTATAGTCACTGATGATCCAGACTTGTATGCTCCTCTTTTTAGGAATATT
TCCAACTTTAAAAGGAGCTATGAGATGATGGAACTTCTACTCAAAGTTTACATTTACGAT
GAAGGAGACAGGCCTATTTTCCACGAACCTCATCTTCTGGGAATTTATTCGTCTGAGGGA
TGGTTCATGAAATTGATGGAGGAAAATCCCTACTTTGTCACTAGGGACCCTGAGAAGGCT
CACCTATTCTATCTGCCATATAGTTCACGACAGTTGCAGATGGCAGTTTATGTGCCTGGC
TCGCATAATCTTAGGCCGTTGTCAGAATTCCTGCGAGACTATGTGAACATGCTAGCTGCA
AAGTATCCCTTCTGGAATCGTACACACGGAACAGATCACTTTATAGTTGCTTGCCATGAT
TGGGGGCCTTACATTTTAAAGGATCACGAGGAGCTAATTCGAAACACTATAAAAGCTCTC
TGCAATGCAGATATATCAGAAGGAATATTTAAAGCTGGAAAGGATGTTTCCCTTCCGGAG
ACCGCCATAAGGAATATCGGTAAGCCTCTAGTAAATGTTGGTGGAAAAAGAGTATCACAA
CGCCCTATCCTCGCCTTTTTTGCTGGAAATATGCACGGGCCAGTCCGTCCCAAACTCCTC
AAGTACTGGAGTGACCGAGATGAAGACATGAAAATTTACGGGCCTCTACCTACCAGTGTC
TCAAGAATAATGTCTTATCCCGACCACATGAAATCAAGCAAGTTCTGTCTTTGTCCAATG
GGTTTTGAAGTGAACAGTCCAAGGATCGTCGAGGCAATATACTACGAGTGTGTACCAGTG
ATCATTGCTGATAATCTTGCCCTCCCATTTGACGAAGTGCTTGATTGGAGTGCTTTCTCA
TTGATAGTTTCTGAGGAAGATATTCCTAAGCTGAAGGAGATTCTGTTGAGTATACCTTTA
AGACGTTATCAGGTGATGCAAAATAACGTCAAGAGGGTGCAGAAGCATTTTCATTGGAAT
GCAATGCCATTTAGATTTGATCTCTTCCATATGATTTTGCATTCCATTTGGTCTAGAAGA
CTCAACCAGTTTCAAGAATCACAGATATCATAA