Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012157
CDS Infomation

pacid=37469195 polypeptide=PGSC0003DMP400008457 locus=PGSC0003DMG400004765 ID=PGSC0003DMT400012157.v4.03 annot-version=v4.03
Sequence

ATGGGTTTGGCCAAAGTGTGGAAATATAGTGGTGGGTTGTTGTCTAATCTGGCTGCGGTG
GTGCATCATCAGCATTTTGTGTTTTCTTGTTTCCAGTCGCCGTCGTATGGGGCGTCGCCG
TCGCCGTCGCAGTCGCGGAGGCCGATCTCATGGACATGTATTTGTGGATTTATGTTGTTT
GCTTTGGGGTTGATTTCACTCTTTACTGGACATGTGGCATCTAATGTTGAATGGTACTCT
CAGCGAATCGTTAAAAGGAATTGGTTCTATAAAATGGATGGAAGTCATCGTGCATCAATT
GACATTTGGAAATCAAGGTATTCAAGTTTTTACTACGGATGCAGTGAGAGAGGCCCTCAT
TTTACTGAGAGAGGCCCTCATTTTTCTTCTGCTGTGCGTGAGCGATTTTCCAACGGATAT
TTACTTATTGCAACTAGTGGAGGTCTCAACCAACAAAGAACTGGCATAACTGATGCTGTA
GTTGTTGCGCGGATTCTCAATGCCACTTTAGTTGTACCTGAATTGGATCATCATTCATTT
TGGAAGGACGAAAGTGATTTTTCCAACATTTTTGATGTTGGTTGGTTCATCTCTTACCTT
GCAAAGGATGTCACAATCGTAAAAAGAGTTCCAGAGAAGGTCATGATGTCAATGGAAAAA
CCCCCATATACCATGCGAGTTCCTAGAAAATCGGAGCCTGAATATTACTTGGAGCAAGTT
TTGCCCATACTCTTAAGAAGACGGGTTCTTCAGCTGACAAAGTTTGACTATCGACTTGCT
AGTGACCTTGATGAAGAGCTACAAAAATTGCGTTGCCGTGTGAATTATCATGCCTTAAGA
TTCACAAAACCCATAAGGAATCTTGGTCAGAAACTTGTATTCCGTATGCGAAAGATGGAA
AAACATTTCATTGCAGTTCACTTGAGGTTTGAACCTGATATGTTGGCATTCTCTGGCTGC
TACTATGGTGGGGGCGACAAGGAAAGATATGAACTGGGTGAGATAAGAAAACGATGGGCT
ACTTTACCTGAGTTGAGCCCTGATGAAGAACGAGCACGAGGGAAATGCCCACTAACACCT
CATGAAATCGGGCTTATGCTGCGGGCTCTTGGCTTCAATAATGACACATATCTTTATGTT
GCATCTGGTGAAATATATGGTGGAGAGAAAACTCTGCAGCCTCTAAGAGAGCTTTTCCCA
AATTTTTATACTAAAGAGATGCTTGCTGGTGAAGAACTTCAACCCTTTCTCCCTTACTCT
TCGCGTCTTGCTGCAATTGACTACATTGTATGTGATGAAAGTGATGTCTTTGCTACTAAC
AATAACGGGAACATGGCAAAGATCCTTGCTGGTAGAAGGAGGTACATGGGGCACAAGAGG
ACGATCAGACCAAATGCGAAAAGGCTCAGTGCATTGTTCATGGCACGGGATAAGATGGAT
TGGGCCACATTCTCTAGAAAAGTCAAATCATGCCAAAGAGGCTTCTTGGGAGAACCTGAG
GAAAATAGACCAGGCCGTGGAGATTTCCATGAATTTCCGTCAACATGTATCTGTAAGAAA
CCATTCAATTTGTCTAACTTCACAAGCAAAGGGAACAAATATCAGATTTCAAGAAGGAAT
TCAACTGTCTCGGAGTCGAGATATAGGTACCTATCCAATAGCAGTAACCTGGAACAAAGG
AGCTCTCAGAAATTCAGTGAAGGGAGCTTAAGAGACAGGCATGGGTCTTTAATAGATGAG
ATTGACCCTGATAACCCTTTATCCGACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008457
PEP Infomation

pacid=37469195 transcript=PGSC0003DMT400012157 locus=PGSC0003DMG400004765 ID=PGSC0003DMT400012157.v4.03 annot-version=v4.03
Sequence

MGLAKVWKYSGGLLSNLAAVVHHQHFVFSCFQSPSYGASPSPSQSRRPISWTCICGFMLF
ALGLISLFTGHVASNVEWYSQRIVKRNWFYKMDGSHRASIDIWKSRYSSFYYGCSERGPH
FTERGPHFSSAVRERFSNGYLLIATSGGLNQQRTGITDAVVVARILNATLVVPELDHHSF
WKDESDFSNIFDVGWFISYLAKDVTIVKRVPEKVMMSMEKPPYTMRVPRKSEPEYYLEQV
LPILLRRRVLQLTKFDYRLASDLDEELQKLRCRVNYHALRFTKPIRNLGQKLVFRMRKME
KHFIAVHLRFEPDMLAFSGCYYGGGDKERYELGEIRKRWATLPELSPDEERARGKCPLTP
HEIGLMLRALGFNNDTYLYVASGEIYGGEKTLQPLRELFPNFYTKEMLAGEELQPFLPYS
SRLAAIDYIVCDESDVFATNNNGNMAKILAGRRRYMGHKRTIRPNAKRLSALFMARDKMD
WATFSRKVKSCQRGFLGEPEENRPGRGDFHEFPSTCICKKPFNLSNFTSKGNKYQISRRN
STVSESRYRYLSNSSNLEQRSSQKFSEGSLRDRHGSLIDEIDPDNPLSD*

Transcript Sequence

Transcript ID

PGSC0003DMT400012157
Transcript Infomation

pacid=37469195 locus=PGSC0003DMG400004765 ID=PGSC0003DMT400012157.v4.03 annot-version=v4.03
Sequence

ATGGGTTTGGCCAAAGTGTGGAAATATAGTGGTGGGTTGTTGTCTAATCTGGCTGCGGTG
GTGCATCATCAGCATTTTGTGTTTTCTTGTTTCCAGTCGCCGTCGTATGGGGCGTCGCCG
TCGCCGTCGCAGTCGCGGAGGCCGATCTCATGGACATGTATTTGTGGATTTATGTTGTTT
GCTTTGGGGTTGATTTCACTCTTTACTGGACATGTGGCATCTAATGTTGAATGGTACTCT
CAGCGAATCGTTAAAAGGAATTGGTTCTATAAAATGGATGGAAGTCATCGTGCATCAATT
GACATTTGGAAATCAAGGTATTCAAGTTTTTACTACGGATGCAGTGAGAGAGGCCCTCAT
TTTACTGAGAGAGGCCCTCATTTTTCTTCTGCTGTGCGTGAGCGATTTTCCAACGGATAT
TTACTTATTGCAACTAGTGGAGGTCTCAACCAACAAAGAACTGGCATAACTGATGCTGTA
GTTGTTGCGCGGATTCTCAATGCCACTTTAGTTGTACCTGAATTGGATCATCATTCATTT
TGGAAGGACGAAAGTGATTTTTCCAACATTTTTGATGTTGGTTGGTTCATCTCTTACCTT
GCAAAGGATGTCACAATCGTAAAAAGAGTTCCAGAGAAGGTCATGATGTCAATGGAAAAA
CCCCCATATACCATGCGAGTTCCTAGAAAATCGGAGCCTGAATATTACTTGGAGCAAGTT
TTGCCCATACTCTTAAGAAGACGGGTTCTTCAGCTGACAAAGTTTGACTATCGACTTGCT
AGTGACCTTGATGAAGAGCTACAAAAATTGCGTTGCCGTGTGAATTATCATGCCTTAAGA
TTCACAAAACCCATAAGGAATCTTGGTCAGAAACTTGTATTCCGTATGCGAAAGATGGAA
AAACATTTCATTGCAGTTCACTTGAGGTTTGAACCTGATATGTTGGCATTCTCTGGCTGC
TACTATGGTGGGGGCGACAAGGAAAGATATGAACTGGGTGAGATAAGAAAACGATGGGCT
ACTTTACCTGAGTTGAGCCCTGATGAAGAACGAGCACGAGGGAAATGCCCACTAACACCT
CATGAAATCGGGCTTATGCTGCGGGCTCTTGGCTTCAATAATGACACATATCTTTATGTT
GCATCTGGTGAAATATATGGTGGAGAGAAAACTCTGCAGCCTCTAAGAGAGCTTTTCCCA
AATTTTTATACTAAAGAGATGCTTGCTGGTGAAGAACTTCAACCCTTTCTCCCTTACTCT
TCGCGTCTTGCTGCAATTGACTACATTGTATGTGATGAAAGTGATGTCTTTGCTACTAAC
AATAACGGGAACATGGCAAAGATCCTTGCTGGTAGAAGGAGGTACATGGGGCACAAGAGG
ACGATCAGACCAAATGCGAAAAGGCTCAGTGCATTGTTCATGGCACGGGATAAGATGGAT
TGGGCCACATTCTCTAGAAAAGTCAAATCATGCCAAAGAGGCTTCTTGGGAGAACCTGAG
GAAAATAGACCAGGCCGTGGAGATTTCCATGAATTTCCGTCAACATGTATCTGTAAGAAA
CCATTCAATTTGTCTAACTTCACAAGCAAAGGGAACAAATATCAGATTTCAAGAAGGAAT
TCAACTGTCTCGGAGTCGAGATATAGGTACCTATCCAATAGCAGTAACCTGGAACAAAGG
AGCTCTCAGAAATTCAGTGAAGGGAGCTTAAGAGACAGGCATGGGTCTTTAATAGATGAG
ATTGACCCTGATAACCCTTTATCCGACTAA