Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012155
CDS Infomation

pacid=37468089 polypeptide=PGSC0003DMP400008455 locus=PGSC0003DMG400004764 ID=PGSC0003DMT400012155.v4.03 annot-version=v4.03
Sequence

ATGCCAAAAATTCATCAACTTGAACTGGTCAAGAAATGCTCTGAGCAGCTACTAAGCAAA
AGGCAGCAAAATTGTTTCTTCTCTAAGTACTTGAGCAGCACTACGAAACCCCATCAAGAA
GATGAATTCAATTCAAAAATCATCTTTATTTCCAATCAGGCACAAAATGAAATTAGTTCT
GAAATTGCCCTGTTTAAGGACTTTCAAATCTTGAATTCTGGTTCGACGCCTAGTGCTTAT
TCTCTGGTTAATTTGATCCGTTCATGTACCAATCTTGGTTGGTTTTCTCATGGTGAGCAG
CTTCATTGCTGCATTTTAAAATCTGGGTATGTCAGCAATGTCTTTGTTGCTACAGCTTTG
GTCAATTTCTACGTGAAATTTCAGTTTTTGGATAATGCACAACAACTGTTTGACGAAATG
ACTGAACCAAATGTTGTTACTTGGAATACGTTGATATCGGGTTGTGTTCGTTCTGGGAAG
TTTACTGCTGCTCTGAACTTGTTTATTCAGCTGGAAAGATCGGAGCTTTGTTCTGATTCA
TACTCTTTTACAGCTGTTTTATCAGCATGTGGATCACTTGGTTTAGTACAACTAGGGAAA
TTGATACATTCCAAGATTGTGAAATTTGGTGTGGAGTGCAGCATTGTGGTCTCGAATTCT
TTGATTGACATGTATGGAAAATGTAACTCTGTAGAAGAATCGACGAGGGTGTTTGATAGT
ATGATGGAGAAAGATACGATTTCTTGGAATTCAGTCATTGCAGCAAATGCAAGAAACAGC
AGGCTTGATCAGGCATTTGATTTCCTTCGTCAAATGCCTGAACCTGATACGGTGTCATAC
AACGAGGTAATTAGTGGTGTGGCACAGTTTGGTAACATAGAAGATGCTGTTGATATGTTA
TCAAGAATGCCTAGCCCGAATTCATCATCATGGAATTCGATAATAACTGGGTATGTCAAC
CGAGGCAGAGCAAAAGAAGCTCTGCTGTTTTTTCGAAACATGCATCTTAGTACTGTTTTT
ATGGATCAATTCACTTTTTCAAGTATATTGAGTGGCATTGCCAATATAGCAGCTATAACA
TGGGGAAAGTTGATCCATTGTTGCACAGTGAAGTATGGTGTGAACGAGACTGTTGTTGTT
GGAACTGCTCTCATTGACATGTATTCTAAATGTGGGCAAATGAATGAAGCTGACATTCTG
TTTGGATGGCTCCCTGTCAAGAATCTGATAACGTGGAACACAATTATATCTGGATATGCT
CATAACAGTAATTCAGATCAAGTGATCCGGCTGTTTGAGCAGTTGAAATCGGTGAAAGAT
TTACAACCAGATGGTATTACATTCGTGAACGTCTTGGCTGCATGTTGGCATAACAGAATG
TCTTGTGAGGCTGCAAATGACTATTTCGAACTGATGGTCAACGATTATGGTATCAGCCCA
ATGCCGGAACACTGCTCTTCAATGATTAAGCTCATGGGACAAGAAGGGGATGTGAGTAAG
GCAGAGAAAATGATATATGAACTCGGATTTGAAAACTGTGGATTAGTTTGGAAGGCATTA
CTAGGTGCTTCTGTCACTTGTGGGAATACAGAAATAGCTGAAGTGGCTGCTGCAAATGTG
ATAGAATTGGAAGGCGATAACGAGTTTGTTTATGTATTAATGTCTAACATGTATGCATTG
CATAAGAAGTGGATCGATGTTGGTGACATGAGGGAGAAGATGAAGGAGAAAAGAGTGAAA
AAAGAAGCTGGCCGGAGTTGGATTGAAGTGGAAAACTCGAATACAGTTACATCTATAATA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400008455
PEP Infomation

pacid=37468089 transcript=PGSC0003DMT400012155 locus=PGSC0003DMG400004764 ID=PGSC0003DMT400012155.v4.03 annot-version=v4.03
Sequence

MPKIHQLELVKKCSEQLLSKRQQNCFFSKYLSSTTKPHQEDEFNSKIIFISNQAQNEISS
EIALFKDFQILNSGSTPSAYSLVNLIRSCTNLGWFSHGEQLHCCILKSGYVSNVFVATAL
VNFYVKFQFLDNAQQLFDEMTEPNVVTWNTLISGCVRSGKFTAALNLFIQLERSELCSDS
YSFTAVLSACGSLGLVQLGKLIHSKIVKFGVECSIVVSNSLIDMYGKCNSVEESTRVFDS
MMEKDTISWNSVIAANARNSRLDQAFDFLRQMPEPDTVSYNEVISGVAQFGNIEDAVDML
SRMPSPNSSSWNSIITGYVNRGRAKEALLFFRNMHLSTVFMDQFTFSSILSGIANIAAIT
WGKLIHCCTVKYGVNETVVVGTALIDMYSKCGQMNEADILFGWLPVKNLITWNTIISGYA
HNSNSDQVIRLFEQLKSVKDLQPDGITFVNVLAACWHNRMSCEAANDYFELMVNDYGISP
MPEHCSSMIKLMGQEGDVSKAEKMIYELGFENCGLVWKALLGASVTCGNTEIAEVAAANV
IELEGDNEFVYVLMSNMYALHKKWIDVGDMREKMKEKRVKKEAGRSWIEVENSNTVTSII
*

Transcript Sequence

Transcript ID

PGSC0003DMT400012155
Transcript Infomation

pacid=37468089 locus=PGSC0003DMG400004764 ID=PGSC0003DMT400012155.v4.03 annot-version=v4.03
Sequence

ATGCCAAAAATTCATCAACTTGAACTGGTCAAGAAATGCTCTGAGCAGCTACTAAGCAAA
AGGCAGCAAAATTGTTTCTTCTCTAAGTACTTGAGCAGCACTACGAAACCCCATCAAGAA
GATGAATTCAATTCAAAAATCATCTTTATTTCCAATCAGGCACAAAATGAAATTAGTTCT
GAAATTGCCCTGTTTAAGGACTTTCAAATCTTGAATTCTGGTTCGACGCCTAGTGCTTAT
TCTCTGGTTAATTTGATCCGTTCATGTACCAATCTTGGTTGGTTTTCTCATGGTGAGCAG
CTTCATTGCTGCATTTTAAAATCTGGGTATGTCAGCAATGTCTTTGTTGCTACAGCTTTG
GTCAATTTCTACGTGAAATTTCAGTTTTTGGATAATGCACAACAACTGTTTGACGAAATG
ACTGAACCAAATGTTGTTACTTGGAATACGTTGATATCGGGTTGTGTTCGTTCTGGGAAG
TTTACTGCTGCTCTGAACTTGTTTATTCAGCTGGAAAGATCGGAGCTTTGTTCTGATTCA
TACTCTTTTACAGCTGTTTTATCAGCATGTGGATCACTTGGTTTAGTACAACTAGGGAAA
TTGATACATTCCAAGATTGTGAAATTTGGTGTGGAGTGCAGCATTGTGGTCTCGAATTCT
TTGATTGACATGTATGGAAAATGTAACTCTGTAGAAGAATCGACGAGGGTGTTTGATAGT
ATGATGGAGAAAGATACGATTTCTTGGAATTCAGTCATTGCAGCAAATGCAAGAAACAGC
AGGCTTGATCAGGCATTTGATTTCCTTCGTCAAATGCCTGAACCTGATACGGTGTCATAC
AACGAGGTAATTAGTGGTGTGGCACAGTTTGGTAACATAGAAGATGCTGTTGATATGTTA
TCAAGAATGCCTAGCCCGAATTCATCATCATGGAATTCGATAATAACTGGGTATGTCAAC
CGAGGCAGAGCAAAAGAAGCTCTGCTGTTTTTTCGAAACATGCATCTTAGTACTGTTTTT
ATGGATCAATTCACTTTTTCAAGTATATTGAGTGGCATTGCCAATATAGCAGCTATAACA
TGGGGAAAGTTGATCCATTGTTGCACAGTGAAGTATGGTGTGAACGAGACTGTTGTTGTT
GGAACTGCTCTCATTGACATGTATTCTAAATGTGGGCAAATGAATGAAGCTGACATTCTG
TTTGGATGGCTCCCTGTCAAGAATCTGATAACGTGGAACACAATTATATCTGGATATGCT
CATAACAGTAATTCAGATCAAGTGATCCGGCTGTTTGAGCAGTTGAAATCGGTGAAAGAT
TTACAACCAGATGGTATTACATTCGTGAACGTCTTGGCTGCATGTTGGCATAACAGAATG
TCTTGTGAGGCTGCAAATGACTATTTCGAACTGATGGTCAACGATTATGGTATCAGCCCA
ATGCCGGAACACTGCTCTTCAATGATTAAGCTCATGGGACAAGAAGGGGATGTGAGTAAG
GCAGAGAAAATGATATATGAACTCGGATTTGAAAACTGTGGATTAGTTTGGAAGGCATTA
CTAGGTGCTTCTGTCACTTGTGGGAATACAGAAATAGCTGAAGTGGCTGCTGCAAATGTG
ATAGAATTGGAAGGCGATAACGAGTTTGTTTATGTATTAATGTCTAACATGTATGCATTG
CATAAGAAGTGGATCGATGTTGGTGACATGAGGGAGAAGATGAAGGAGAAAAGAGTGAAA
AAAGAAGCTGGCCGGAGTTGGATTGAAGTGGAAAACTCGAATACAGTTACATCTATAATA
TGA