Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012106
CDS Infomation

pacid=37469038 polypeptide=PGSC0003DMP400008420 locus=PGSC0003DMG400004753 ID=PGSC0003DMT400012106.v4.03 annot-version=v4.03
Sequence

ATGGCTGCAAGTGCAACTACTACTACTTCTACTTCTACTTCTACAAATCTCAAATTCCAA
ATCCAACCCATTAAACCCAAACGCCGACGTTGCCGTGAAACCACCATTACTACTTCTACT
AACCCTTCACATTATTCGCCCACCAACTGTTCGACACAATGCCTCAACCAAACTCGTAAA
GTTGATACACCCACTATTGTCTCACCGGACAACTCATGGTGTTGTCCTGCTTCTAAATCA
CCCTCGCCGTCGCCGTCGCCGTCGCCGCCGCAACCCATTTCCTCCTGTTCCTCCTCGATT
TCGGATAATACCAAGATCCGATACTCGCCGACGACGTTCCCTCGAGTAATGGAATCTATC
GGTACCCTTTACGGCGGCGGTGGAGGAGGTGGTACTCCGATCCCAAATAACAACACCCAC
GAAGGATTTCCGTCGTCTTTTAGTAAATTCAACTCAGCGCTTACTGCGGGGTTGCTGAAC
CCAATGTCACCGCCACCTTCTATGGATAAGACTCGTTCGAGTCCGACCCTTTTCGAAATG
ATGGCGAATGAACCTGAATGTATTACGAGATCGACAATTAACACACCCATTTCGAATGGA
TGCTCAAATCAGAAGCCGGCTTCGTTTGTTCCACTGGACAAACAGGCGTTAATGCAACAG
CGACTTTTGGATCTTTTAGCTTGTAGAAGCCCAGGGAATCAGTTTAATGATTCGAGTTCG
AGTGATGTGAAGTTAACATTGAGTTCTAAGGATGGTTTGAGTGTTGCTATGAATGTTCAT
AGGCAGATCTTGGTGGTTCATAGTCGTTTTTTCGCTGTGAAGTTGTCGGAGAAATGGGTA
AAGCAACAAAGAAATTCAAGTCCTTACATTGTTGAGATTGCGGATTGTGATGATATTGAA
GTGTATATTGAGACTTTGAGATTGATGTATTGCAAGGATTTGAGGAGAAGGCTCATGAAG
GTAGATGTTTCCAAAGTCCTTGGGATCTTAAAGGTTTCTGCTGCAATTGGGTTCGATGCG
GGGGTGTTATCGTGCCTGGAGTACTTGGAAGCTGCTCCTTGGGCTGAGGATGAAGAAGAA
AAGGTAGCTTCACTGTTGTTTGAGCTTCGGCTTGAAGGAGTAGGTGCTGGGGAAGTTTTA
AGGAGGGTATCTCTTGATGTTGCATCGGGAACAGAGAGTGGAAATGGGAATGAGGAAGTG
CTTCTCAAGCTATTGCATGTGGTTCTTGAAGGGAAAGATGAGAAGGCGAGACGAGAGATG
AAAGGCTTAGTATCCAAAATGTTGCATGAGAATTCATCTCATAACGATTTGAGGAAGGAG
TCATTGTATTCAGCTTGCAATGCATGCCTGCAATTGCTCCGCCACCATTTTTTACGGGCA
GCAGATGCAGACATGATGGATGTGGGTCAGATTGCACGACAGGCTGATAATCTACATTGG
ATTTTGGATATCTTGATTGATCGACAGATAGCTGAAGATTTTTTGAGGACTTGGGCTTCT
CAGTCTGAATTATCTGAGGCACATTCTAAGGTGCCTGCACTCCATAGGTATGAGGTTAGT
AGAGTCACGGCTAGACTGTTTGTTGGTATTGGTAAAGGGCAATTACTAGCTTCCAAGGAT
GCTAGGTGCTCTCTTTTGCAGACATGGTTAGTGCCTTTCTATGAGGATTTTGGATGGATG
AGGAGGGCATCAAGAGGTCTTGATCGGCATTTAATTGAGGATGGTCTCAGCAATACTATT
CTGACCCTACCAATGGCGTTGCAGCAAGATATTCTGATGTCTTGGTTTGATCGGTTTTTG
AACTCCGGAGATGACTGTCCAAATATCCAGAGGGGATTTGAAATTTGGTGGAGAAGGTCT
TTCTGGAGGCGAAATGGTGAGCCTGAACGCCCTCGTCAAATGCGTGTCATGACTGCAACA
ATTGAGAACTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008420
PEP Infomation

pacid=37469038 transcript=PGSC0003DMT400012106 locus=PGSC0003DMG400004753 ID=PGSC0003DMT400012106.v4.03 annot-version=v4.03
Sequence

MAASATTTTSTSTSTNLKFQIQPIKPKRRRCRETTITTSTNPSHYSPTNCSTQCLNQTRK
VDTPTIVSPDNSWCCPASKSPSPSPSPSPPQPISSCSSSISDNTKIRYSPTTFPRVMESI
GTLYGGGGGGGTPIPNNNTHEGFPSSFSKFNSALTAGLLNPMSPPPSMDKTRSSPTLFEM
MANEPECITRSTINTPISNGCSNQKPASFVPLDKQALMQQRLLDLLACRSPGNQFNDSSS
SDVKLTLSSKDGLSVAMNVHRQILVVHSRFFAVKLSEKWVKQQRNSSPYIVEIADCDDIE
VYIETLRLMYCKDLRRRLMKVDVSKVLGILKVSAAIGFDAGVLSCLEYLEAAPWAEDEEE
KVASLLFELRLEGVGAGEVLRRVSLDVASGTESGNGNEEVLLKLLHVVLEGKDEKARREM
KGLVSKMLHENSSHNDLRKESLYSACNACLQLLRHHFLRAADADMMDVGQIARQADNLHW
ILDILIDRQIAEDFLRTWASQSELSEAHSKVPALHRYEVSRVTARLFVGIGKGQLLASKD
ARCSLLQTWLVPFYEDFGWMRRASRGLDRHLIEDGLSNTILTLPMALQQDILMSWFDRFL
NSGDDCPNIQRGFEIWWRRSFWRRNGEPERPRQMRVMTATIENS*

Transcript Sequence

Transcript ID

PGSC0003DMT400012106
Transcript Infomation

pacid=37469038 locus=PGSC0003DMG400004753 ID=PGSC0003DMT400012106.v4.03 annot-version=v4.03
Sequence

ATGGCTGCAAGTGCAACTACTACTACTTCTACTTCTACTTCTACAAATCTCAAATTCCAA
ATCCAACCCATTAAACCCAAACGCCGACGTTGCCGTGAAACCACCATTACTACTTCTACT
AACCCTTCACATTATTCGCCCACCAACTGTTCGACACAATGCCTCAACCAAACTCGTAAA
GTTGATACACCCACTATTGTCTCACCGGACAACTCATGGTGTTGTCCTGCTTCTAAATCA
CCCTCGCCGTCGCCGTCGCCGTCGCCGCCGCAACCCATTTCCTCCTGTTCCTCCTCGATT
TCGGATAATACCAAGATCCGATACTCGCCGACGACGTTCCCTCGAGTAATGGAATCTATC
GGTACCCTTTACGGCGGCGGTGGAGGAGGTGGTACTCCGATCCCAAATAACAACACCCAC
GAAGGATTTCCGTCGTCTTTTAGTAAATTCAACTCAGCGCTTACTGCGGGGTTGCTGAAC
CCAATGTCACCGCCACCTTCTATGGATAAGACTCGTTCGAGTCCGACCCTTTTCGAAATG
ATGGCGAATGAACCTGAATGTATTACGAGATCGACAATTAACACACCCATTTCGAATGGA
TGCTCAAATCAGAAGCCGGCTTCGTTTGTTCCACTGGACAAACAGGCGTTAATGCAACAG
CGACTTTTGGATCTTTTAGCTTGTAGAAGCCCAGGGAATCAGTTTAATGATTCGAGTTCG
AGTGATGTGAAGTTAACATTGAGTTCTAAGGATGGTTTGAGTGTTGCTATGAATGTTCAT
AGGCAGATCTTGGTGGTTCATAGTCGTTTTTTCGCTGTGAAGTTGTCGGAGAAATGGGTA
AAGCAACAAAGAAATTCAAGTCCTTACATTGTTGAGATTGCGGATTGTGATGATATTGAA
GTGTATATTGAGACTTTGAGATTGATGTATTGCAAGGATTTGAGGAGAAGGCTCATGAAG
GTAGATGTTTCCAAAGTCCTTGGGATCTTAAAGGTTTCTGCTGCAATTGGGTTCGATGCG
GGGGTGTTATCGTGCCTGGAGTACTTGGAAGCTGCTCCTTGGGCTGAGGATGAAGAAGAA
AAGGTAGCTTCACTGTTGTTTGAGCTTCGGCTTGAAGGAGTAGGTGCTGGGGAAGTTTTA
AGGAGGGTATCTCTTGATGTTGCATCGGGAACAGAGAGTGGAAATGGGAATGAGGAAGTG
CTTCTCAAGCTATTGCATGTGGTTCTTGAAGGGAAAGATGAGAAGGCGAGACGAGAGATG
AAAGGCTTAGTATCCAAAATGTTGCATGAGAATTCATCTCATAACGATTTGAGGAAGGAG
TCATTGTATTCAGCTTGCAATGCATGCCTGCAATTGCTCCGCCACCATTTTTTACGGGCA
GCAGATGCAGACATGATGGATGTGGGTCAGATTGCACGACAGGCTGATAATCTACATTGG
ATTTTGGATATCTTGATTGATCGACAGATAGCTGAAGATTTTTTGAGGACTTGGGCTTCT
CAGTCTGAATTATCTGAGGCACATTCTAAGGTGCCTGCACTCCATAGGTATGAGGTTAGT
AGAGTCACGGCTAGACTGTTTGTTGGTATTGGTAAAGGGCAATTACTAGCTTCCAAGGAT
GCTAGGTGCTCTCTTTTGCAGACATGGTTAGTGCCTTTCTATGAGGATTTTGGATGGATG
AGGAGGGCATCAAGAGGTCTTGATCGGCATTTAATTGAGGATGGTCTCAGCAATACTATT
CTGACCCTACCAATGGCGTTGCAGCAAGATATTCTGATGTCTTGGTTTGATCGGTTTTTG
AACTCCGGAGATGACTGTCCAAATATCCAGAGGGGATTTGAAATTTGGTGGAGAAGGTCT
TTCTGGAGGCGAAATGGTGAGCCTGAACGCCCTCGTCAAATGCGTGTCATGACTGCAACA
ATTGAGAACTCTTGA