Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012104
CDS Infomation

pacid=37467711 polypeptide=PGSC0003DMP400008418 locus=PGSC0003DMG400004752 ID=PGSC0003DMT400012104.v4.03 annot-version=v4.03
Sequence

ATGATTGTAATACCTCAAAGTAGCAGCCTACCAGCAAAAGGGGTTCTTGGTGTTTCTGGT
TTTGTGCCTTCAATTTCTTCATCTTCTTCACCAGAAGCAGCAATTTGCAAGAAAGATGCA
AACTTTACAAGAAATGAACCTGTTTCTGTGTTGGATACAAGAAGTCCAAGTCCTTCAGCT
TCATCTTCCTCGTGCTCTTATGGTGCTCAACATGGTGGAAATACTGCAGTTCCCGGTGTC
GGAAGTGGGAAAACTGATGGCCGGAAGGAGGAGTTTGTGACGGAGCTGCAGCCATTCACG
GTAGGGTTGGAGCCTGAAAAATCTGGTCTTGGATTTGGAGATTTGGATAATTTGTTGCCT
GAATTTGCCGGCTCCGACCAAAGCTTTCTCCGGTGGATTTCCGGCGATGTGGAGGACCCG
TCAGTCAGCTTGAAGCAATTACTCAATGGGGATTTGGGTTGTGGAGTCTCTCTTCAAAGC
TCTGGATTTGAGGTTTCAGCTACAGGTTCTTTAGCTCATTCAGATAATGTCTCTATTTCT
GGTTCAAATATCTGTCTGAATGCCAACATTGAAAAACTTAGTTCTGTCATAGATTCAATA
AATAGTCGAAACAATAACTTCGAAAACCTGAATGTCAATCCTTCTCTAGAACAGAAGCCT
CAACCTTTTGGTCCACAAGTAATGGCAAACCAAACTCAATTCCAGAATGTTGCTTGTGTT
AACATTTTAGGGTCGTCTTATGACATCAATCAAGAACAGCCTCCGCCCAAACGCCACAAT
TCGGGTACCCTCGGAGGTTCTCTATTGCCCAAAGTTCCATTTTTTGATGCCAATTGTGAC
TTCATGTTGAGGAAACAGCCACTGGGACAAATGCAACCACAGGTCAATTTGCTGCCTCCT
CACCAGTTTCAGCCAAAGCCATTGATTGTACCTAAGCTTGAGGCAGCTGGTGGTGGTGGT
AATGGTAATTTGATGGTGCCTCGTCATCAATTGCAGGAACAACAGTTTATTTATGACCAG
ATTTTTCAGGCCTCTGAACTATTGCTGGCTGGACAATTCTCAAACGCGCAAATGATATTG
GCGCGGCTCAATCAACAGCTTTCTCCCATTGGGAAACCCTCAAGGAGGGCTGCTTTTTAT
ATCAAGGAGGCTCTGCAGTTGCCTTTCCTTTTGCCTTGCACATCCACATTTTTGCTTCCA
AGAAGTCCCACCCCATTTGATTGTGTGCTTAAAATGGATGCTTACAAGGCCTTTTCCGAA
ATATCTCCACTTATCCAGTTCATGAATTTCACTTCCAATCAGGCTATTCTTGAAGCTCTT
GGGGATGCTGAGCAAATTCACATAATAGATTTTGACATTGGTTTTGGTGCTCAATGGTCC
TCGTTTATGCAAGAGCTTCCAAGTAGCAATAGAAAGGCAACTTCTCTAAAGATTACAGCC
TTTGCCTCCCCATCAACCCACCACTCTGTCGAAATTGGCATCATGCATGAAAGTTTGACA
CAGTTTGCTAATGATGCGGGAATACGATTTGAGCTTGAAGTTATTAACTTGGATTCCTTT
GACCCTAAGTCTTATCCCTTATCCACCTTGAGGTCATCTGAGTGTGAGGCAATTGCTATA
AATTTCCCTATCTGGTCTATTTCAAGCTGTCTGTTTGCATTTCCTTCACTTCTTCACTGC
ATGAAGCAACTATCTCCTAAAGTTGTTGTATCACTGGAACGTGGATGTGAACGTACTGAA
CTCCCCTTAAAGCATCACCTCATCCATGCTCTCCAGTATTATGAGACACTCTTAGCTAGT
ATTGATGCTGCTAATTTAACTCCAGACATTGGGAAAAAGATAGAGAGGTCTCTCTTCCAG
CCTAGCATTGAGAACATGATCTTGGGGCGCCTCCGATCCCCTGATCGGATGCCCCCATGG
AGAAATCTTTTTGCTTCTGCAGGATTTTCTCCTGTTGCATTTAGTAATATGACTGAAATC
CAGGCTGAATGTGTTGTTAAGAGAACTCAGGTAGGAGGGTTTCACGTCCAGAAGCGACAG
ACGTCACTCGTGCTATGCTGGAAGCAGCAGGAGCTCTTGTCAGCTGTGACTTGGAGGTGC
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400008418
PEP Infomation

pacid=37467711 transcript=PGSC0003DMT400012104 locus=PGSC0003DMG400004752 ID=PGSC0003DMT400012104.v4.03 annot-version=v4.03
Sequence

MIVIPQSSSLPAKGVLGVSGFVPSISSSSSPEAAICKKDANFTRNEPVSVLDTRSPSPSA
SSSSCSYGAQHGGNTAVPGVGSGKTDGRKEEFVTELQPFTVGLEPEKSGLGFGDLDNLLP
EFAGSDQSFLRWISGDVEDPSVSLKQLLNGDLGCGVSLQSSGFEVSATGSLAHSDNVSIS
GSNICLNANIEKLSSVIDSINSRNNNFENLNVNPSLEQKPQPFGPQVMANQTQFQNVACV
NILGSSYDINQEQPPPKRHNSGTLGGSLLPKVPFFDANCDFMLRKQPLGQMQPQVNLLPP
HQFQPKPLIVPKLEAAGGGGNGNLMVPRHQLQEQQFIYDQIFQASELLLAGQFSNAQMIL
ARLNQQLSPIGKPSRRAAFYIKEALQLPFLLPCTSTFLLPRSPTPFDCVLKMDAYKAFSE
ISPLIQFMNFTSNQAILEALGDAEQIHIIDFDIGFGAQWSSFMQELPSSNRKATSLKITA
FASPSTHHSVEIGIMHESLTQFANDAGIRFELEVINLDSFDPKSYPLSTLRSSECEAIAI
NFPIWSISSCLFAFPSLLHCMKQLSPKVVVSLERGCERTELPLKHHLIHALQYYETLLAS
IDAANLTPDIGKKIERSLFQPSIENMILGRLRSPDRMPPWRNLFASAGFSPVAFSNMTEI
QAECVVKRTQVGGFHVQKRQTSLVLCWKQQELLSAVTWRC*

Transcript Sequence

Transcript ID

PGSC0003DMT400012104
Transcript Infomation

pacid=37467711 locus=PGSC0003DMG400004752 ID=PGSC0003DMT400012104.v4.03 annot-version=v4.03
Sequence

ATGATTGTAATACCTCAAAGTAGCAGCCTACCAGCAAAAGGGGTTCTTGGTGTTTCTGGT
TTTGTGCCTTCAATTTCTTCATCTTCTTCACCAGAAGCAGCAATTTGCAAGAAAGATGCA
AACTTTACAAGAAATGAACCTGTTTCTGTGTTGGATACAAGAAGTCCAAGTCCTTCAGCT
TCATCTTCCTCGTGCTCTTATGGTGCTCAACATGGTGGAAATACTGCAGTTCCCGGTGTC
GGAAGTGGGAAAACTGATGGCCGGAAGGAGGAGTTTGTGACGGAGCTGCAGCCATTCACG
GTAGGGTTGGAGCCTGAAAAATCTGGTCTTGGATTTGGAGATTTGGATAATTTGTTGCCT
GAATTTGCCGGCTCCGACCAAAGCTTTCTCCGGTGGATTTCCGGCGATGTGGAGGACCCG
TCAGTCAGCTTGAAGCAATTACTCAATGGGGATTTGGGTTGTGGAGTCTCTCTTCAAAGC
TCTGGATTTGAGGTTTCAGCTACAGGTTCTTTAGCTCATTCAGATAATGTCTCTATTTCT
GGTTCAAATATCTGTCTGAATGCCAACATTGAAAAACTTAGTTCTGTCATAGATTCAATA
AATAGTCGAAACAATAACTTCGAAAACCTGAATGTCAATCCTTCTCTAGAACAGAAGCCT
CAACCTTTTGGTCCACAAGTAATGGCAAACCAAACTCAATTCCAGAATGTTGCTTGTGTT
AACATTTTAGGGTCGTCTTATGACATCAATCAAGAACAGCCTCCGCCCAAACGCCACAAT
TCGGGTACCCTCGGAGGTTCTCTATTGCCCAAAGTTCCATTTTTTGATGCCAATTGTGAC
TTCATGTTGAGGAAACAGCCACTGGGACAAATGCAACCACAGGTCAATTTGCTGCCTCCT
CACCAGTTTCAGCCAAAGCCATTGATTGTACCTAAGCTTGAGGCAGCTGGTGGTGGTGGT
AATGGTAATTTGATGGTGCCTCGTCATCAATTGCAGGAACAACAGTTTATTTATGACCAG
ATTTTTCAGGCCTCTGAACTATTGCTGGCTGGACAATTCTCAAACGCGCAAATGATATTG
GCGCGGCTCAATCAACAGCTTTCTCCCATTGGGAAACCCTCAAGGAGGGCTGCTTTTTAT
ATCAAGGAGGCTCTGCAGTTGCCTTTCCTTTTGCCTTGCACATCCACATTTTTGCTTCCA
AGAAGTCCCACCCCATTTGATTGTGTGCTTAAAATGGATGCTTACAAGGCCTTTTCCGAA
ATATCTCCACTTATCCAGTTCATGAATTTCACTTCCAATCAGGCTATTCTTGAAGCTCTT
GGGGATGCTGAGCAAATTCACATAATAGATTTTGACATTGGTTTTGGTGCTCAATGGTCC
TCGTTTATGCAAGAGCTTCCAAGTAGCAATAGAAAGGCAACTTCTCTAAAGATTACAGCC
TTTGCCTCCCCATCAACCCACCACTCTGTCGAAATTGGCATCATGCATGAAAGTTTGACA
CAGTTTGCTAATGATGCGGGAATACGATTTGAGCTTGAAGTTATTAACTTGGATTCCTTT
GACCCTAAGTCTTATCCCTTATCCACCTTGAGGTCATCTGAGTGTGAGGCAATTGCTATA
AATTTCCCTATCTGGTCTATTTCAAGCTGTCTGTTTGCATTTCCTTCACTTCTTCACTGC
ATGAAGCAACTATCTCCTAAAGTTGTTGTATCACTGGAACGTGGATGTGAACGTACTGAA
CTCCCCTTAAAGCATCACCTCATCCATGCTCTCCAGTATTATGAGACACTCTTAGCTAGT
ATTGATGCTGCTAATTTAACTCCAGACATTGGGAAAAAGATAGAGAGGTCTCTCTTCCAG
CCTAGCATTGAGAACATGATCTTGGGGCGCCTCCGATCCCCTGATCGGATGCCCCCATGG
AGAAATCTTTTTGCTTCTGCAGGATTTTCTCCTGTTGCATTTAGTAATATGACTGAAATC
CAGGCTGAATGTGTTGTTAAGAGAACTCAGGTAGGAGGGTTTCACGTCCAGAAGCGACAG
ACGTCACTCGTGCTATGCTGGAAGCAGCAGGAGCTCTTGTCAGCTGTGACTTGGAGGTGC
TGA