Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012092
CDS Infomation

pacid=37469661 polypeptide=PGSC0003DMP400008411 locus=PGSC0003DMG400004746 ID=PGSC0003DMT400012092.v4.03 annot-version=v4.03
Sequence

ATGCTATCGGAGTTTTCAGAAATAAAAGGACAACTTAAAAATCTTTGTGAGGAGCGCTCC
AATTTGCTGGACACGTTGAGACAGTTGGAGGCAGCTAATATCGAAGGTGAAGCTTCCGGG
GTTCATGATGGTGAATTCCAACTGATGAAGCAATTCTCCAGTTTAGGACGTGGCAAGTAT
AGTGAATATAGTACAACTGAATCGTCTGATGATATTGAGAAACAAGAGCTTGATGAAGCG
TCAGATGAAGAGGAAGCCAACTATATTGACGCAAATGAATGCTTTTCTGAATATCATACA
TCTGGTGGGTCAGTAGTTGGGGACAACATGGAAAACAATACCATTGATGCATCTGCTCAA
GCACAGGTTGTACGCAGAACGAAGCTTCCAGATCCAGTTGAAAAAGAGAAAGGGGTTAGT
CTTTGGGCTATGATCAAAGACAATGTCGGGAAAGATCTAACACGAGTTTGCCTGCCAGTG
TATTTCAACGAGCCAATTTCCTCCCTACAAAAGTGCTTTGAAGATTTAGAGTACTCATAT
CTTTTAGATAGAGCATATGAACATGGAAAATCGGGGAACAGTCTTTTAAGAATTCTAAAC
GTTGCTGCTTTTGCTGTGTCTGGTTATGCTTCAACTGAAGGCCGGAATTGTAAACCTTTC
AATCCTTTGCTGGGAGAAACCTATGAAGCTGATTTTCCTGAAAAAGGAATCCGCTTTTTC
TCGGAGAAGGTTAGTCACCACCCAACACTTATTGCCTGTCACTGTGAAGGTAGAGGATGG
AAATTCTGGGCTGACAGTAATCTTAAGTCAAAATTTTGGGGGAGATCAATTCAAGTCGAT
CCTGTTGGAACACTTACCTTAGAATTCGACGATGGGGAGATCTTCCAGTGGAGCAAGGTC
ACGACAAGTATCTACAACCTTATTCTTGGTAAGATATATTGTGATCATCATGGGACAATG
CATATACGTGGCAATCGTCAGTACTCATGCAAGCTCAAGTACAAAGAGCCATCCATTATC
GAGCGTAATCCTCATCAGGTTCATGGATTTGTTGAAGATGTCTCTGGGAAGAAAGTTACT
ACATTATTCGGAAAGTGGAACGAGAGCATGTACTATATCAATGGAGAATGGGCCAGCAAG
CCTAAGGATTCATCTGTTTTATCTTTATTGTGGACAAGGAATAATCCACCCCCAAATCTC
ACTCGATACAACTTATCTTCTTTTGCTATTACACTGAATGAGTTGACACCAGGACTTAAG
GAGATGCTCCCACCTACAGATTCAAGACTCAGACCTGATCAGCGACATCTGGAGAATGGG
GAATACGACAAGGCAAATGCAGAGAAGTTGCGGTTAGAGACACGGCAGAGAATGTCCAGG
AAATTACAAGAGAATGGCTGGAAACCTCGATGGTTTCAAAGAGAAGGTGAAGATGGGACT
TTCCGGTATATGGGTGGCTACTGGGAGGCAAGGGAGACGGCTACTTGGGATGGCTGCCCA
AATATTTTTGGCGAGATTGATCAAGATCTCCTCAACTCCTTTGAAGGATCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008411
PEP Infomation

pacid=37469661 transcript=PGSC0003DMT400012092 locus=PGSC0003DMG400004746 ID=PGSC0003DMT400012092.v4.03 annot-version=v4.03
Sequence

MLSEFSEIKGQLKNLCEERSNLLDTLRQLEAANIEGEASGVHDGEFQLMKQFSSLGRGKY
SEYSTTESSDDIEKQELDEASDEEEANYIDANECFSEYHTSGGSVVGDNMENNTIDASAQ
AQVVRRTKLPDPVEKEKGVSLWAMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSY
LLDRAYEHGKSGNSLLRILNVAAFAVSGYASTEGRNCKPFNPLLGETYEADFPEKGIRFF
SEKVSHHPTLIACHCEGRGWKFWADSNLKSKFWGRSIQVDPVGTLTLEFDDGEIFQWSKV
TTSIYNLILGKIYCDHHGTMHIRGNRQYSCKLKYKEPSIIERNPHQVHGFVEDVSGKKVT
TLFGKWNESMYYINGEWASKPKDSSVLSLLWTRNNPPPNLTRYNLSSFAITLNELTPGLK
EMLPPTDSRLRPDQRHLENGEYDKANAEKLRLETRQRMSRKLQENGWKPRWFQREGEDGT
FRYMGGYWEARETATWDGCPNIFGEIDQDLLNSFEGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400012092
Transcript Infomation

pacid=37469661 locus=PGSC0003DMG400004746 ID=PGSC0003DMT400012092.v4.03 annot-version=v4.03
Sequence

ATGCTATCGGAGTTTTCAGAAATAAAAGGACAACTTAAAAATCTTTGTGAGGAGCGCTCC
AATTTGCTGGACACGTTGAGACAGTTGGAGGCAGCTAATATCGAAGGTGAAGCTTCCGGG
GTTCATGATGGTGAATTCCAACTGATGAAGCAATTCTCCAGTTTAGGACGTGGCAAGTAT
AGTGAATATAGTACAACTGAATCGTCTGATGATATTGAGAAACAAGAGCTTGATGAAGCG
TCAGATGAAGAGGAAGCCAACTATATTGACGCAAATGAATGCTTTTCTGAATATCATACA
TCTGGTGGGTCAGTAGTTGGGGACAACATGGAAAACAATACCATTGATGCATCTGCTCAA
GCACAGGTTGTACGCAGAACGAAGCTTCCAGATCCAGTTGAAAAAGAGAAAGGGGTTAGT
CTTTGGGCTATGATCAAAGACAATGTCGGGAAAGATCTAACACGAGTTTGCCTGCCAGTG
TATTTCAACGAGCCAATTTCCTCCCTACAAAAGTGCTTTGAAGATTTAGAGTACTCATAT
CTTTTAGATAGAGCATATGAACATGGAAAATCGGGGAACAGTCTTTTAAGAATTCTAAAC
GTTGCTGCTTTTGCTGTGTCTGGTTATGCTTCAACTGAAGGCCGGAATTGTAAACCTTTC
AATCCTTTGCTGGGAGAAACCTATGAAGCTGATTTTCCTGAAAAAGGAATCCGCTTTTTC
TCGGAGAAGGTTAGTCACCACCCAACACTTATTGCCTGTCACTGTGAAGGTAGAGGATGG
AAATTCTGGGCTGACAGTAATCTTAAGTCAAAATTTTGGGGGAGATCAATTCAAGTCGAT
CCTGTTGGAACACTTACCTTAGAATTCGACGATGGGGAGATCTTCCAGTGGAGCAAGGTC
ACGACAAGTATCTACAACCTTATTCTTGGTAAGATATATTGTGATCATCATGGGACAATG
CATATACGTGGCAATCGTCAGTACTCATGCAAGCTCAAGTACAAAGAGCCATCCATTATC
GAGCGTAATCCTCATCAGGTTCATGGATTTGTTGAAGATGTCTCTGGGAAGAAAGTTACT
ACATTATTCGGAAAGTGGAACGAGAGCATGTACTATATCAATGGAGAATGGGCCAGCAAG
CCTAAGGATTCATCTGTTTTATCTTTATTGTGGACAAGGAATAATCCACCCCCAAATCTC
ACTCGATACAACTTATCTTCTTTTGCTATTACACTGAATGAGTTGACACCAGGACTTAAG
GAGATGCTCCCACCTACAGATTCAAGACTCAGACCTGATCAGCGACATCTGGAGAATGGG
GAATACGACAAGGCAAATGCAGAGAAGTTGCGGTTAGAGACACGGCAGAGAATGTCCAGG
AAATTACAAGAGAATGGCTGGAAACCTCGATGGTTTCAAAGAGAAGGTGAAGATGGGACT
TTCCGGTATATGGGTGGCTACTGGGAGGCAAGGGAGACGGCTACTTGGGATGGCTGCCCA
AATATTTTTGGCGAGATTGATCAAGATCTCCTCAACTCCTTTGAAGGATCCTGA