Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012085
CDS Infomation

pacid=37471161 polypeptide=PGSC0003DMP400008404 locus=PGSC0003DMG400004743 ID=PGSC0003DMT400012085.v4.03 annot-version=v4.03
Sequence

ATGTTTGTTACTGGTGACTATGATCTGAGTTTATCATTGAAGTATAAGGAACCTGTCAAA
GCCGTTTTCAAGGAGACCATATTCGGGCATGATCATACATTCAAGACACAGGTTTATGAA
CCGCATCACCTGTGCTACACACAAAAGGATACGATGATGGATTTGAGCTGGAAAGAGTTG
GATGGAGCTTATTTTAGCAAAGGAGGCCAACAAGGAAATCCAGTTGCATTTGGAAATTTT
ACCAGATCACCTGTGTCTGTTGATCAGAAGAGAATTTGCAGCATCCCTAAGGTGTTCAAC
TGGTTACAAGAGAAGCAAGTCATGTTTCCAGGGTTCCAGCAACGACATTCAAATCCTCAA
ATTTGTCCCACTCATTATCTTGATCATATTGATAGGGGGAACTTGAATAAGAGACATGGT
TTCTTCAATAGTTTAGAGAATTCAATCACGGAAAATCATTATTACCGTGGTGGTGTAGCA
CATCATTCTGAGGAGGTTAATCTCTCGTTGAGCATTGGTAGGAACAATATGAAAGCAACT
GTCAGTACAAAGACCTTTGATCATTTCATTGATTTAGAAGAATCAGATGATACTAGGGAT
TGTAATGCAGGACTAAATCCCCAGTCTCCTATGGATTCTACTCGTGTTTCTTATTCTGGA
TATAAGCGTGATTACCAATGCACTCATAGCTTCACAAACAACACTACAGATAATTGGTTT
GATGGGACTACAGGAAATTATTTTGTTCCAAATGACAGCACGAGTTGTCTTGAGCAGAAC
CCTTTAGCTGAAGGAGTTGAACAATGTGAGAAGACTCTCCTTTCTAGAGATACATCAGGA
AAGGGCAAAGTTCTTTTTTCCGATGAACGAGCTTTTTTGGACCTTAACAAATCCATATTT
GATGATTCTTTACACTTTGATGATCCTAGCTTGGCATGTTCTTCAAGTAAATCTTCCTCA
AGAGAGTCACACGGACTGTCTGGTGGGCCTCGTGAGAGCACCTTTCCCACTGCTTCTAAA
AGGAGAGAGCAAGATGATGACAATCCAAATGAGACTTCTGCTATTGTTCCCCAAAGAATT
CTTAGTCCTGTGACTGGCAGCAATCACGGTTATAAAAGAACAAAAATTGTTGGAGTTGAA
CAGTTCGTGATAAACCTCAATCATCCTCTTTCGGACAGTAGTGAAAATCCTGGCAGTCTC
ACTACTGACAACGATGATCAAGTTTCTAGTACACCAGAAAACAAAAGCAAGGAAACCAAG
CATGATCCAATGTCTTCTCCTGACTATAAGACTCAAGAATTTGTCAAGGATAGCGGTCCT
GATAGATCTCCCTTGTCATGCAAATCTTCTTGTTTTGAGGATATCTCAAGTGGCATAGAG
ACAATGCAATCCGGAACTCAATTGAAAAATTCAGGTACCAAAAAATCTGAAACACTTCAA
GCAAATATATCTCTACGTCAGGAGGATGTCGACTCTTCCAGTAACAGTGATAACCAGATA
GGAGAAACATCAGAAGTCGATGGTCAGATCATAAGAGGAGCAGTGTCCCTTATCTATCTT
GCACTGGAATGTTCTGAACCAAGCATTGCTATTAGCATGAACAAGATTGAAGGTGATCAA
AATACAGAACAACCACAATGTTCTTCAGACACTTTTGAAGAAATGGTGCTCAATCAACCC
GAAAGCTCTATTGACGACTGTTGTGTGACCTCAAATGTATTTGAATTCAATGCCACAGAG
AGAAAAGACTACGGAATAACATTAAAGAGAGGACGAAGAATGAAAGATTTCCAAAGGGAT
ATTATGCCAAGCTTGGCAACACTTTCTAGGTATGAGATTTGTGAAGATATAAAGATTATG
GAGACAGCACTTAGATCAAGAGAATACAAGAGACATAGGTCCAAAATGACTGATGGAAAC
AAGTGGTTCAATCCTGTGAGAAATAGAAGATCCAGACTCAACTATGTAGGCCGCAAGTAT
TATTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400008404
PEP Infomation

pacid=37471161 transcript=PGSC0003DMT400012085 locus=PGSC0003DMG400004743 ID=PGSC0003DMT400012085.v4.03 annot-version=v4.03
Sequence

MFVTGDYDLSLSLKYKEPVKAVFKETIFGHDHTFKTQVYEPHHLCYTQKDTMMDLSWKEL
DGAYFSKGGQQGNPVAFGNFTRSPVSVDQKRICSIPKVFNWLQEKQVMFPGFQQRHSNPQ
ICPTHYLDHIDRGNLNKRHGFFNSLENSITENHYYRGGVAHHSEEVNLSLSIGRNNMKAT
VSTKTFDHFIDLEESDDTRDCNAGLNPQSPMDSTRVSYSGYKRDYQCTHSFTNNTTDNWF
DGTTGNYFVPNDSTSCLEQNPLAEGVEQCEKTLLSRDTSGKGKVLFSDERAFLDLNKSIF
DDSLHFDDPSLACSSSKSSSRESHGLSGGPRESTFPTASKRREQDDDNPNETSAIVPQRI
LSPVTGSNHGYKRTKIVGVEQFVINLNHPLSDSSENPGSLTTDNDDQVSSTPENKSKETK
HDPMSSPDYKTQEFVKDSGPDRSPLSCKSSCFEDISSGIETMQSGTQLKNSGTKKSETLQ
ANISLRQEDVDSSSNSDNQIGETSEVDGQIIRGAVSLIYLALECSEPSIAISMNKIEGDQ
NTEQPQCSSDTFEEMVLNQPESSIDDCCVTSNVFEFNATERKDYGITLKRGRRMKDFQRD
IMPSLATLSRYEICEDIKIMETALRSREYKRHRSKMTDGNKWFNPVRNRRSRLNYVGRKY
YS*

Transcript Sequence

Transcript ID

PGSC0003DMT400012085
Transcript Infomation

pacid=37471161 locus=PGSC0003DMG400004743 ID=PGSC0003DMT400012085.v4.03 annot-version=v4.03
Sequence

ATGTTTGTTACTGGTGACTATGATCTGAGTTTATCATTGAAGTATAAGGAACCTGTCAAA
GCCGTTTTCAAGGAGACCATATTCGGGCATGATCATACATTCAAGACACAGGTTTATGAA
CCGCATCACCTGTGCTACACACAAAAGGATACGATGATGGATTTGAGCTGGAAAGAGTTG
GATGGAGCTTATTTTAGCAAAGGAGGCCAACAAGGAAATCCAGTTGCATTTGGAAATTTT
ACCAGATCACCTGTGTCTGTTGATCAGAAGAGAATTTGCAGCATCCCTAAGGTGTTCAAC
TGGTTACAAGAGAAGCAAGTCATGTTTCCAGGGTTCCAGCAACGACATTCAAATCCTCAA
ATTTGTCCCACTCATTATCTTGATCATATTGATAGGGGGAACTTGAATAAGAGACATGGT
TTCTTCAATAGTTTAGAGAATTCAATCACGGAAAATCATTATTACCGTGGTGGTGTAGCA
CATCATTCTGAGGAGGTTAATCTCTCGTTGAGCATTGGTAGGAACAATATGAAAGCAACT
GTCAGTACAAAGACCTTTGATCATTTCATTGATTTAGAAGAATCAGATGATACTAGGGAT
TGTAATGCAGGACTAAATCCCCAGTCTCCTATGGATTCTACTCGTGTTTCTTATTCTGGA
TATAAGCGTGATTACCAATGCACTCATAGCTTCACAAACAACACTACAGATAATTGGTTT
GATGGGACTACAGGAAATTATTTTGTTCCAAATGACAGCACGAGTTGTCTTGAGCAGAAC
CCTTTAGCTGAAGGAGTTGAACAATGTGAGAAGACTCTCCTTTCTAGAGATACATCAGGA
AAGGGCAAAGTTCTTTTTTCCGATGAACGAGCTTTTTTGGACCTTAACAAATCCATATTT
GATGATTCTTTACACTTTGATGATCCTAGCTTGGCATGTTCTTCAAGTAAATCTTCCTCA
AGAGAGTCACACGGACTGTCTGGTGGGCCTCGTGAGAGCACCTTTCCCACTGCTTCTAAA
AGGAGAGAGCAAGATGATGACAATCCAAATGAGACTTCTGCTATTGTTCCCCAAAGAATT
CTTAGTCCTGTGACTGGCAGCAATCACGGTTATAAAAGAACAAAAATTGTTGGAGTTGAA
CAGTTCGTGATAAACCTCAATCATCCTCTTTCGGACAGTAGTGAAAATCCTGGCAGTCTC
ACTACTGACAACGATGATCAAGTTTCTAGTACACCAGAAAACAAAAGCAAGGAAACCAAG
CATGATCCAATGTCTTCTCCTGACTATAAGACTCAAGAATTTGTCAAGGATAGCGGTCCT
GATAGATCTCCCTTGTCATGCAAATCTTCTTGTTTTGAGGATATCTCAAGTGGCATAGAG
ACAATGCAATCCGGAACTCAATTGAAAAATTCAGGTACCAAAAAATCTGAAACACTTCAA
GCAAATATATCTCTACGTCAGGAGGATGTCGACTCTTCCAGTAACAGTGATAACCAGATA
GGAGAAACATCAGAAGTCGATGGTCAGATCATAAGAGGAGCAGTGTCCCTTATCTATCTT
GCACTGGAATGTTCTGAACCAAGCATTGCTATTAGCATGAACAAGATTGAAGGTGATCAA
AATACAGAACAACCACAATGTTCTTCAGACACTTTTGAAGAAATGGTGCTCAATCAACCC
GAAAGCTCTATTGACGACTGTTGTGTGACCTCAAATGTATTTGAATTCAATGCCACAGAG
AGAAAAGACTACGGAATAACATTAAAGAGAGGACGAAGAATGAAAGATTTCCAAAGGGAT
ATTATGCCAAGCTTGGCAACACTTTCTAGGTATGAGATTTGTGAAGATATAAAGATTATG
GAGACAGCACTTAGATCAAGAGAATACAAGAGACATAGGTCCAAAATGACTGATGGAAAC
AAGTGGTTCAATCCTGTGAGAAATAGAAGATCCAGACTCAACTATGTAGGCCGCAAGTAT
TATTCATGA