Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012084
CDS Infomation

pacid=37470069 polypeptide=PGSC0003DMP400008403 locus=PGSC0003DMG400004742 ID=PGSC0003DMT400012084.v4.03 annot-version=v4.03
Sequence

ATGGCGATAAATTTCATTACTCATTTCTTCTTTTTTGTGTTTTTCCTCTATACCTTCTCT
GCCACTTGTCAAGATTCCGATCTTGAAACTGATTGCACAAACAAATGGATCCATATCAGA
CATCTACCACCTCAATTCAATCTTGACCTTTTATCAAATTGCTCTGCATATCCTCTGTTT
GATAATTTCTGTCCTTATTTAGCAAACCATGGCCTTGGTCAAAAGACTCACAACAAATCA
CACAGCTGGTATCGTACTGATCCTTTTATGCTTGAGCTTGTTTTTCATCGTAGAATGCTT
GAATACCCTTGTCTTACATCTGATCCTACTCATGCCAATGCAATTTATGTGCCTTACTAT
GGTGGTCTTGATAGTCTTAAGTACTTGTTTGGTCCTGAAGTTAATTCAAGTTTTCAGCAT
GGTTTAGATTTGTATGATTTTCTAGTACATGTTGATTCACCTAATATTTGGAGTAGAAAC
TATGGTCATGACCATTTTATGGTTATGGCAAGGCCTGCTTGGGACTTTAATCAACCTTTG
AATAGTGATCCTTTATATTTTGGTACTTCATTTCTTGAATTGCCTGAGTTTTACAATGTT
ACTGCATTGACTCATGAAAGTAGAGCTTATCCTTGGCAAGAACAAGCTATTCCATATCCC
ACTTCATTCCATCCTCCGAATTTAGCCTTTTTCGAATCTTGGGTGAATAGGTTAAGGAGG
TCTAGGAGGACTACATTGATGTTGTTTGCTGGTGGTGGTGGAATTTCAGCTAATCCTAAT
GTTAGGAGAAGTATTAGACTTGAGTGTGAGAATGCCACTAGTATGAGTGCTAATGGCACA
GGGTACGAGAAATTGTGCGAATTTGTAGATTGTTCTAATGGGATTTGTCAACATGATCCT
ATAAGGTTTATGAAGCCAATGTTGCAAGCTAGCTTTTGTTTACAGCCTCCAGGGGATACG
CCAACTAGACGTTCCACGTTTGATGGGATTCTTGCAGGGTGCATTCCTGTGTTCTTTGAA
GATTTGTCCGCGAAAAAACAGTATGGATGGCATTTACCAGAGGAGAAGTATGAAGAATTT
TCAGTGTCGATACCTAAAGAAGACGTTGTGTTTAAGGGGTTGAGCATTGTTGATGTTTTA
ACAAGTATACCAAGAGCTCAAGTTAGAAGGATGAGAGAAAAGGTTTTGGAAATGTTGCCT
AGAGTTATGTATAGAAAGCAGGGAAGTTCTTTGGGTTTGAGGAGTAAAAAGGATGCCTTT
GATATTGCAATTGAAGGCACTTTGGAAAGAATCAAGTCTAGGCTTCAAGAAGTAGCAGCT
CAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400008403
PEP Infomation

pacid=37470069 transcript=PGSC0003DMT400012084 locus=PGSC0003DMG400004742 ID=PGSC0003DMT400012084.v4.03 annot-version=v4.03
Sequence

MAINFITHFFFFVFFLYTFSATCQDSDLETDCTNKWIHIRHLPPQFNLDLLSNCSAYPLF
DNFCPYLANHGLGQKTHNKSHSWYRTDPFMLELVFHRRMLEYPCLTSDPTHANAIYVPYY
GGLDSLKYLFGPEVNSSFQHGLDLYDFLVHVDSPNIWSRNYGHDHFMVMARPAWDFNQPL
NSDPLYFGTSFLELPEFYNVTALTHESRAYPWQEQAIPYPTSFHPPNLAFFESWVNRLRR
SRRTTLMLFAGGGGISANPNVRRSIRLECENATSMSANGTGYEKLCEFVDCSNGICQHDP
IRFMKPMLQASFCLQPPGDTPTRRSTFDGILAGCIPVFFEDLSAKKQYGWHLPEEKYEEF
SVSIPKEDVVFKGLSIVDVLTSIPRAQVRRMREKVLEMLPRVMYRKQGSSLGLRSKKDAF
DIAIEGTLERIKSRLQEVAAQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400012084
Transcript Infomation

pacid=37470069 locus=PGSC0003DMG400004742 ID=PGSC0003DMT400012084.v4.03 annot-version=v4.03
Sequence

ATGGCGATAAATTTCATTACTCATTTCTTCTTTTTTGTGTTTTTCCTCTATACCTTCTCT
GCCACTTGTCAAGATTCCGATCTTGAAACTGATTGCACAAACAAATGGATCCATATCAGA
CATCTACCACCTCAATTCAATCTTGACCTTTTATCAAATTGCTCTGCATATCCTCTGTTT
GATAATTTCTGTCCTTATTTAGCAAACCATGGCCTTGGTCAAAAGACTCACAACAAATCA
CACAGCTGGTATCGTACTGATCCTTTTATGCTTGAGCTTGTTTTTCATCGTAGAATGCTT
GAATACCCTTGTCTTACATCTGATCCTACTCATGCCAATGCAATTTATGTGCCTTACTAT
GGTGGTCTTGATAGTCTTAAGTACTTGTTTGGTCCTGAAGTTAATTCAAGTTTTCAGCAT
GGTTTAGATTTGTATGATTTTCTAGTACATGTTGATTCACCTAATATTTGGAGTAGAAAC
TATGGTCATGACCATTTTATGGTTATGGCAAGGCCTGCTTGGGACTTTAATCAACCTTTG
AATAGTGATCCTTTATATTTTGGTACTTCATTTCTTGAATTGCCTGAGTTTTACAATGTT
ACTGCATTGACTCATGAAAGTAGAGCTTATCCTTGGCAAGAACAAGCTATTCCATATCCC
ACTTCATTCCATCCTCCGAATTTAGCCTTTTTCGAATCTTGGGTGAATAGGTTAAGGAGG
TCTAGGAGGACTACATTGATGTTGTTTGCTGGTGGTGGTGGAATTTCAGCTAATCCTAAT
GTTAGGAGAAGTATTAGACTTGAGTGTGAGAATGCCACTAGTATGAGTGCTAATGGCACA
GGGTACGAGAAATTGTGCGAATTTGTAGATTGTTCTAATGGGATTTGTCAACATGATCCT
ATAAGGTTTATGAAGCCAATGTTGCAAGCTAGCTTTTGTTTACAGCCTCCAGGGGATACG
CCAACTAGACGTTCCACGTTTGATGGGATTCTTGCAGGGTGCATTCCTGTGTTCTTTGAA
GATTTGTCCGCGAAAAAACAGTATGGATGGCATTTACCAGAGGAGAAGTATGAAGAATTT
TCAGTGTCGATACCTAAAGAAGACGTTGTGTTTAAGGGGTTGAGCATTGTTGATGTTTTA
ACAAGTATACCAAGAGCTCAAGTTAGAAGGATGAGAGAAAAGGTTTTGGAAATGTTGCCT
AGAGTTATGTATAGAAAGCAGGGAAGTTCTTTGGGTTTGAGGAGTAAAAAGGATGCCTTT
GATATTGCAATTGAAGGCACTTTGGAAAGAATCAAGTCTAGGCTTCAAGAAGTAGCAGCT
CAATAA