Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012045
CDS Infomation

pacid=37449178 polypeptide=PGSC0003DMP400008385 locus=PGSC0003DMG400004725 ID=PGSC0003DMT400012045.v4.03 annot-version=v4.03
Sequence

ATGGGGTCTGGCCAATTCTCATTTCTGCTCTTTCTCTGTTTGCTTTCTTTTTCTTCATCC
ATACCTCATCCATGCCGCAAAGATCAAAGTATTTCCCTTCTAAAATTCAAGAAAACGTTT
ACTGTAAATTCCACAGCCTCTGATTCTAATGTCTGTGAAATATTTTATGGTCAGAAGCCA
TATCCAAAAACGAGTTCATGGAACATGAGTATAGATTGTTGTTCATGGGATGGAGTCATA
TGTGATGAGATGACTGGCCATGTCATTGAACTTGACCTCGGCTGCAGCTGTCTCGTAGGA
AAGCTTGATTCCAATAGCAGCCTTTTCCAACTCTCTCATCTCCAAAGGCTCAACCTTTCT
GTTAATAACTTCTCTCGTGTGGATTCAATTCCTCTTCAGTCTCTAGATACTATTGATTTG
CGGTCCAATTTGCTTCAAGGTTCACTACCTATTCCACCAATTTCCACGAGATTCTTCCTC
ATAGCCCATAATAATCTCACTGAAGAAATTCCTTCACATATTTGCAATTTGAAATCATTG
GTAATGCTAGATTTGGCGAGAAACAACTTGAAGGGAGCAATTCCGCAATGTTTGGGTAAT
ATCAGAAGCCTCAAAATTCTAGATATGCACAACAACAAACTTTCTGGGACTCTTCCAACA
ACTTTCAGCAATGGAAGTTCACTTAGAAAACTCAACTTGCGTGGAAATAAACTAGAGGGG
AAAATTCCCCGATCTTTGGCCAATTGCAAAGTGTTGCAAGTTCTTGATCTAGGAGATAAT
CATATCATTGACACATTCCCTATGTGGGTTGGAACTCTTCCAAAGCTTCATGTTTTAAGC
TTGAGATTGAATAAGTTGCATGGACCCATTAGAACTTTAAAAAATGAAAACATGTTTCCT
GATCTTCGAATTATAGATCTCTCTTACAATGCCTTCACAGGAAATTTACCTACGAGTCTG
TTTCGACATCTGAAAACCATGAGAACAATTGATCCATCAAAGAAGAAACTAACATACCTT
GAAGACTATTATTACCAAGATTCTATTATAGTCATAAGCAAGGGATATGAGATTGAACTT
ATCAAAATTTTGACTGTTTACGCCTCTATTGATCTTTCAAGTAACAAATTTGAAGGACAT
ATTCCAAGTATCATGGGAGAACTTACTGCACTTAAGGCGCTGAATTTCTCTCATAATAGA
TTGCAAGGACGTATACCATCATCACTTGGAAATTTATCTTTGGTTGGATCATTGGACTTA
TCAGTTAACCAGCTTTCGGGAGAGATACCAAAACAACTTGCTTCTCTTAAGTATCTTGAA
TACTTCTTCACATCAGAAAATAATCTCACTGAAGAAATTCCTTCATCTATTTGCAATTTG
ACATCACTGGTAATACTAGATTTGGCGAGAAACAATTTGAAGGGAGTAATTCCTCAATGT
TTGGGTAATATTACTGGCCTCGTGGTTCTTGATATGCACAACAACAATCTTTCTGGGACT
CTTCCAACAATTTTCAGCAATGGGAGATCACTGAGGAGCCTCAACTTGCATGGCAATAAA
CTAGAGGGGAATATTCCCCGATCTTTGTCCAATTGCAAAGCGTTGCAGGTTCTTGATTTA
GGACATAATCATCTCAACGACACATTCCCCATGTGGTTGGGAACTCTTCCAGATCTACAA
GTTCTAAGCTTGAGATCCAATAAATTGTATGGGTCCATTCCACCGTCAAGTGTTGGAAGT
ATGTTTCCTAAGCTTCGAATCATAGATCTCTCTTACAATGCCTTCTCAGGAAACCTACCT
ACGAGTTTGTTTCAACATCTGAAAACCATGAGGACAATTGATCCATCCAAGACGGCACTA
ATTGATGGTTATTATTACCAAGACTCAGTAGTTGTAGTTACAAAGGGATTGGAGCTTGAA
GTTGAGAGAATCTTGTTTTTGTACACCACTATGGATCTTTCAAACAACAATTTTGAAGGA
CATATTCCTGATGTTATAGGAGATCTCATTGCGCTTCGGATGCTTAATTTTTCTCATAAC
AGATTGCAAGGTCATATTCCATCATCACTTGGAAATTTATTTGTAGTCGAATCATTGAAC
CTTTCATTTAACCAGCTTTCGGGAGAGATACCACAACAACTCGCTTCTCTTACATCTCTT
GCGGTCTTAAATCTCTCCCACAATCATCTACAAGGATGCATCCCAAAAGGACCTCAATTC
AATACATTTGAGATCAATTCATATGAAGGTAACGATGGATTATGTGGATACCCTTTTCCT
CAAGGTTGTGGAAGTAGCAGGATGCCAGAGACAGAAAACACAGCATATGTTCTGGATGAA
GAAAGCAATTCTACATTTCTGAGTGAATTTTGGAATGGGATTCTCATGGGATATGGAAGT
GGACTTATTATTGGATTCTCCATAGCATCTTTCATGCTTTCGAGTCGAAATTCCAATTGG
CTTTCTAGGATTGCTGAAGAACTTGAATACAGAATCGTTATGAGAAGGCGAAAGAAGAAG
CAAGGCCATCACAGAAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400008385
PEP Infomation

pacid=37449178 transcript=PGSC0003DMT400012045 locus=PGSC0003DMG400004725 ID=PGSC0003DMT400012045.v4.03 annot-version=v4.03
Sequence

MGSGQFSFLLFLCLLSFSSSIPHPCRKDQSISLLKFKKTFTVNSTASDSNVCEIFYGQKP
YPKTSSWNMSIDCCSWDGVICDEMTGHVIELDLGCSCLVGKLDSNSSLFQLSHLQRLNLS
VNNFSRVDSIPLQSLDTIDLRSNLLQGSLPIPPISTRFFLIAHNNLTEEIPSHICNLKSL
VMLDLARNNLKGAIPQCLGNIRSLKILDMHNNKLSGTLPTTFSNGSSLRKLNLRGNKLEG
KIPRSLANCKVLQVLDLGDNHIIDTFPMWVGTLPKLHVLSLRLNKLHGPIRTLKNENMFP
DLRIIDLSYNAFTGNLPTSLFRHLKTMRTIDPSKKKLTYLEDYYYQDSIIVISKGYEIEL
IKILTVYASIDLSSNKFEGHIPSIMGELTALKALNFSHNRLQGRIPSSLGNLSLVGSLDL
SVNQLSGEIPKQLASLKYLEYFFTSENNLTEEIPSSICNLTSLVILDLARNNLKGVIPQC
LGNITGLVVLDMHNNNLSGTLPTIFSNGRSLRSLNLHGNKLEGNIPRSLSNCKALQVLDL
GHNHLNDTFPMWLGTLPDLQVLSLRSNKLYGSIPPSSVGSMFPKLRIIDLSYNAFSGNLP
TSLFQHLKTMRTIDPSKTALIDGYYYQDSVVVVTKGLELEVERILFLYTTMDLSNNNFEG
HIPDVIGDLIALRMLNFSHNRLQGHIPSSLGNLFVVESLNLSFNQLSGEIPQQLASLTSL
AVLNLSHNHLQGCIPKGPQFNTFEINSYEGNDGLCGYPFPQGCGSSRMPETENTAYVLDE
ESNSTFLSEFWNGILMGYGSGLIIGFSIASFMLSSRNSNWLSRIAEELEYRIVMRRRKKK
QGHHRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400012045
Transcript Infomation

pacid=37449178 locus=PGSC0003DMG400004725 ID=PGSC0003DMT400012045.v4.03 annot-version=v4.03
Sequence

ATGGGGTCTGGCCAATTCTCATTTCTGCTCTTTCTCTGTTTGCTTTCTTTTTCTTCATCC
ATACCTCATCCATGCCGCAAAGATCAAAGTATTTCCCTTCTAAAATTCAAGAAAACGTTT
ACTGTAAATTCCACAGCCTCTGATTCTAATGTCTGTGAAATATTTTATGGTCAGAAGCCA
TATCCAAAAACGAGTTCATGGAACATGAGTATAGATTGTTGTTCATGGGATGGAGTCATA
TGTGATGAGATGACTGGCCATGTCATTGAACTTGACCTCGGCTGCAGCTGTCTCGTAGGA
AAGCTTGATTCCAATAGCAGCCTTTTCCAACTCTCTCATCTCCAAAGGCTCAACCTTTCT
GTTAATAACTTCTCTCGTGTGGATTCAATTCCTCTTCAGTCTCTAGATACTATTGATTTG
CGGTCCAATTTGCTTCAAGGTTCACTACCTATTCCACCAATTTCCACGAGATTCTTCCTC
ATAGCCCATAATAATCTCACTGAAGAAATTCCTTCACATATTTGCAATTTGAAATCATTG
GTAATGCTAGATTTGGCGAGAAACAACTTGAAGGGAGCAATTCCGCAATGTTTGGGTAAT
ATCAGAAGCCTCAAAATTCTAGATATGCACAACAACAAACTTTCTGGGACTCTTCCAACA
ACTTTCAGCAATGGAAGTTCACTTAGAAAACTCAACTTGCGTGGAAATAAACTAGAGGGG
AAAATTCCCCGATCTTTGGCCAATTGCAAAGTGTTGCAAGTTCTTGATCTAGGAGATAAT
CATATCATTGACACATTCCCTATGTGGGTTGGAACTCTTCCAAAGCTTCATGTTTTAAGC
TTGAGATTGAATAAGTTGCATGGACCCATTAGAACTTTAAAAAATGAAAACATGTTTCCT
GATCTTCGAATTATAGATCTCTCTTACAATGCCTTCACAGGAAATTTACCTACGAGTCTG
TTTCGACATCTGAAAACCATGAGAACAATTGATCCATCAAAGAAGAAACTAACATACCTT
GAAGACTATTATTACCAAGATTCTATTATAGTCATAAGCAAGGGATATGAGATTGAACTT
ATCAAAATTTTGACTGTTTACGCCTCTATTGATCTTTCAAGTAACAAATTTGAAGGACAT
ATTCCAAGTATCATGGGAGAACTTACTGCACTTAAGGCGCTGAATTTCTCTCATAATAGA
TTGCAAGGACGTATACCATCATCACTTGGAAATTTATCTTTGGTTGGATCATTGGACTTA
TCAGTTAACCAGCTTTCGGGAGAGATACCAAAACAACTTGCTTCTCTTAAGTATCTTGAA
TACTTCTTCACATCAGAAAATAATCTCACTGAAGAAATTCCTTCATCTATTTGCAATTTG
ACATCACTGGTAATACTAGATTTGGCGAGAAACAATTTGAAGGGAGTAATTCCTCAATGT
TTGGGTAATATTACTGGCCTCGTGGTTCTTGATATGCACAACAACAATCTTTCTGGGACT
CTTCCAACAATTTTCAGCAATGGGAGATCACTGAGGAGCCTCAACTTGCATGGCAATAAA
CTAGAGGGGAATATTCCCCGATCTTTGTCCAATTGCAAAGCGTTGCAGGTTCTTGATTTA
GGACATAATCATCTCAACGACACATTCCCCATGTGGTTGGGAACTCTTCCAGATCTACAA
GTTCTAAGCTTGAGATCCAATAAATTGTATGGGTCCATTCCACCGTCAAGTGTTGGAAGT
ATGTTTCCTAAGCTTCGAATCATAGATCTCTCTTACAATGCCTTCTCAGGAAACCTACCT
ACGAGTTTGTTTCAACATCTGAAAACCATGAGGACAATTGATCCATCCAAGACGGCACTA
ATTGATGGTTATTATTACCAAGACTCAGTAGTTGTAGTTACAAAGGGATTGGAGCTTGAA
GTTGAGAGAATCTTGTTTTTGTACACCACTATGGATCTTTCAAACAACAATTTTGAAGGA
CATATTCCTGATGTTATAGGAGATCTCATTGCGCTTCGGATGCTTAATTTTTCTCATAAC
AGATTGCAAGGTCATATTCCATCATCACTTGGAAATTTATTTGTAGTCGAATCATTGAAC
CTTTCATTTAACCAGCTTTCGGGAGAGATACCACAACAACTCGCTTCTCTTACATCTCTT
GCGGTCTTAAATCTCTCCCACAATCATCTACAAGGATGCATCCCAAAAGGACCTCAATTC
AATACATTTGAGATCAATTCATATGAAGGTAACGATGGATTATGTGGATACCCTTTTCCT
CAAGGTTGTGGAAGTAGCAGGATGCCAGAGACAGAAAACACAGCATATGTTCTGGATGAA
GAAAGCAATTCTACATTTCTGAGTGAATTTTGGAATGGGATTCTCATGGGATATGGAAGT
GGACTTATTATTGGATTCTCCATAGCATCTTTCATGCTTTCGAGTCGAAATTCCAATTGG
CTTTCTAGGATTGCTGAAGAACTTGAATACAGAATCGTTATGAGAAGGCGAAAGAAGAAG
CAAGGCCATCACAGAAGATGA