Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012042
CDS Infomation

pacid=37446932 polypeptide=PGSC0003DMP400008384 locus=PGSC0003DMG400004723 ID=PGSC0003DMT400012042.v4.03 annot-version=v4.03
Sequence

ATGTCTCCAATTTCCGGCCGTCACGCGTCGTCGGAGCTGACGGCGGAAGGAATAGCAGCC
TCAGGTCTAACATCGGAAAAACTAAGCTTACCAACTCTACAATCAAAGATGAAATGCGAT
CCAGAAGGATACGAAGCTGAACTAACATTAGTATACAATCAATTCAAGTCGTCCATGGAT
CTCTTCGAACAACAAGCAGCACTAAATTTCACTTCCCTTAGCGGTGTATCAACTGACCCG
ACTGTTTCTAAGGACTTAGGTGACCGTGCTATGTTTTTATCACATGTAACTCCGTTTTAT
CCTAAAAAGCTTGTTAATTTCCCTAAAGAGTTAGCTCAGTTGCTTCGTTCTTCGGCTCGG
ACTTTGCCTTCTGGATTACGTGTTCATGTTACTCAAGCTTTGATTTTACTCGTTAATCGA
AAGATTGTTGACATTGGGGAGACACTTGCATTGTTCATGGAGCTCCAAACTCTGGGGGAT
AGGGTTTTGAGAAATTTGGCTTTCTCTCATATTATCCATAGTATTAGACGTATGAATCAG
AAGCACAAGAATGATACGAAAAATCGGGCACTTCAGAATATTTTGTTTGCTTTGCTACAG
CAAGAGGATGAAGCAAAAGCAAAAAGATCACTGATCACACTTTGTGAGCTCCATCGAAGA
AGGGTGTGGTTTGATGATAGAACAGCAAATGCTATATGCTCGGCATGCTTTCATTCATCA
TCGAGGATTATGATTGCCTCTTTATCCTTTCTTCTTGATTATGAGAAAATTGAAGATGAC
TCAGATAGTGATATGGCAGATAGTGAAGATGAGCAGACAGCCAATCAGCCTCAGGTTTTG
CTAAATAAAGAGGCTATTTATAAGGCAAATAATAAGGGTACATCGTCCAGCAAAAAGAAA
AAGCAAGCAAAGTTGCAGCGTGCCGTCCGCAGCATGAAGAAGCAGCAGCGCTTGCAATCT
GAAAATAACAACACTAGTTATTATTCCCCATTAAACCACTTAAAGGATGCTCAGGGATTT
GCTGAAAAGCTTTTCTCACGTCTTCAGACTTGCAATGAGAGGTTTGAGGTTAAAATGATG
TTGATGAAAGTAATTGCCCGAACAGTTGGGCTCCATCACTTGATTTTGTTGAACTTCTAT
CCTTACCTTCAGAGATATGTTCAGCCCCATCAGCGTGATGTGACAAATTTGCTTGCTGCA
GCGGTTCAGGCATGTCATGATATGGTGCCTCCTGATGCTGTTGAACCATTATTTAAACAA
GTAGTCAATCAGTTTGTGCATGACCGTTCAAGGCCTGAGGCTATATCTGTCGGACTTAAT
GTAATCCGAGAAATATGCTTACGCATGCCTTTGTTGATGACAGAAGATTTGCTACAAGAC
CTTGTGTTGTATAAAAAATCGAATGAGAAGGCAGTTTCTGCATCGGCTCGATCGCTTCTT
ACTTTGTTCAGGGAGGTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400008384
PEP Infomation

pacid=37446932 transcript=PGSC0003DMT400012042 locus=PGSC0003DMG400004723 ID=PGSC0003DMT400012042.v4.03 annot-version=v4.03
Sequence

MSPISGRHASSELTAEGIAASGLTSEKLSLPTLQSKMKCDPEGYEAELTLVYNQFKSSMD
LFEQQAALNFTSLSGVSTDPTVSKDLGDRAMFLSHVTPFYPKKLVNFPKELAQLLRSSAR
TLPSGLRVHVTQALILLVNRKIVDIGETLALFMELQTLGDRVLRNLAFSHIIHSIRRMNQ
KHKNDTKNRALQNILFALLQQEDEAKAKRSLITLCELHRRRVWFDDRTANAICSACFHSS
SRIMIASLSFLLDYEKIEDDSDSDMADSEDEQTANQPQVLLNKEAIYKANNKGTSSSKKK
KQAKLQRAVRSMKKQQRLQSENNNTSYYSPLNHLKDAQGFAEKLFSRLQTCNERFEVKMM
LMKVIARTVGLHHLILLNFYPYLQRYVQPHQRDVTNLLAAAVQACHDMVPPDAVEPLFKQ
VVNQFVHDRSRPEAISVGLNVIREICLRMPLLMTEDLLQDLVLYKKSNEKAVSASARSLL
TLFREV*

Transcript Sequence

Transcript ID

PGSC0003DMT400012042
Transcript Infomation

pacid=37446932 locus=PGSC0003DMG400004723 ID=PGSC0003DMT400012042.v4.03 annot-version=v4.03
Sequence

ATGTCTCCAATTTCCGGCCGTCACGCGTCGTCGGAGCTGACGGCGGAAGGAATAGCAGCC
TCAGGTCTAACATCGGAAAAACTAAGCTTACCAACTCTACAATCAAAGATGAAATGCGAT
CCAGAAGGATACGAAGCTGAACTAACATTAGTATACAATCAATTCAAGTCGTCCATGGAT
CTCTTCGAACAACAAGCAGCACTAAATTTCACTTCCCTTAGCGGTGTATCAACTGACCCG
ACTGTTTCTAAGGACTTAGGTGACCGTGCTATGTTTTTATCACATGTAACTCCGTTTTAT
CCTAAAAAGCTTGTTAATTTCCCTAAAGAGTTAGCTCAGTTGCTTCGTTCTTCGGCTCGG
ACTTTGCCTTCTGGATTACGTGTTCATGTTACTCAAGCTTTGATTTTACTCGTTAATCGA
AAGATTGTTGACATTGGGGAGACACTTGCATTGTTCATGGAGCTCCAAACTCTGGGGGAT
AGGGTTTTGAGAAATTTGGCTTTCTCTCATATTATCCATAGTATTAGACGTATGAATCAG
AAGCACAAGAATGATACGAAAAATCGGGCACTTCAGAATATTTTGTTTGCTTTGCTACAG
CAAGAGGATGAAGCAAAAGCAAAAAGATCACTGATCACACTTTGTGAGCTCCATCGAAGA
AGGGTGTGGTTTGATGATAGAACAGCAAATGCTATATGCTCGGCATGCTTTCATTCATCA
TCGAGGATTATGATTGCCTCTTTATCCTTTCTTCTTGATTATGAGAAAATTGAAGATGAC
TCAGATAGTGATATGGCAGATAGTGAAGATGAGCAGACAGCCAATCAGCCTCAGGTTTTG
CTAAATAAAGAGGCTATTTATAAGGCAAATAATAAGGGTACATCGTCCAGCAAAAAGAAA
AAGCAAGCAAAGTTGCAGCGTGCCGTCCGCAGCATGAAGAAGCAGCAGCGCTTGCAATCT
GAAAATAACAACACTAGTTATTATTCCCCATTAAACCACTTAAAGGATGCTCAGGGATTT
GCTGAAAAGCTTTTCTCACGTCTTCAGACTTGCAATGAGAGGTTTGAGGTTAAAATGATG
TTGATGAAAGTAATTGCCCGAACAGTTGGGCTCCATCACTTGATTTTGTTGAACTTCTAT
CCTTACCTTCAGAGATATGTTCAGCCCCATCAGCGTGATGTGACAAATTTGCTTGCTGCA
GCGGTTCAGGCATGTCATGATATGGTGCCTCCTGATGCTGTTGAACCATTATTTAAACAA
GTAGTCAATCAGTTTGTGCATGACCGTTCAAGGCCTGAGGCTATATCTGTCGGACTTAAT
GTAATCCGAGAAATATGCTTACGCATGCCTTTGTTGATGACAGAAGATTTGCTACAAGAC
CTTGTGTTGTATAAAAAATCGAATGAGAAGGCAGTTTCTGCATCGGCTCGATCGCTTCTT
ACTTTGTTCAGGGAGGTATAA