Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400012001
CDS Infomation

pacid=37447665 polypeptide=PGSC0003DMP400008353 locus=PGSC0003DMG400004710 ID=PGSC0003DMT400012001.v4.03 annot-version=v4.03
Sequence

ATGGAGGAAAATCAGAAGCAGAAGCAATTTTTGGTTTCATCTGTATCGGAGCTTACAAGT
TCTTCATCTTCGTTGTTTTCCAAAACCGAACCGGTTTTTGCTCGGTTAAGCTTAGATTCC
GGTTCGCCGGAGCTCCGAATTGGTCAGGGTGCAGAGTTGAGTGATGCCGTTGTGTTCAAT
GTTAAGATTTCTCAGTTATTCAAGCTAGGCCCTGCCGAATCCTTATGTGTATCTGAAGCC
AATAAAGAGAAATCACATTCAAGAGGAATCTCCATTCAATTTAGAAACGAGGAGGAAAGT
AGGGCCTTCCATTGTGCATTTGAGCAATGGAAGAAGGAAGTGGTTGTTCAAGAACCTTTG
AACAATGGAGCAGTATCAACTTCGAAAAGCAAATTTGATGACAAAATTGAGGCATCTTCT
GCCAAAATGTACTTTCACTACTATGGACAGCTATTGCATCAGCAGAATATGTTGCAGGAT
TTTGTAAGGACAGGAACCTATTATTCCGCTGTAATTGAGAACCGTGCTGATTTTCTTGAT
CGCGTAGTGGTTGATGTTGGTGCTGGTAGTGGCATTTTGTCATTATTTGCAGCTCAGGCT
GGTGCAAAGCATGTTTATGCCATAGAGGCTTCTGAAATGGCCGACTATGCAAGACAACTT
ATTGCTGGAAATCCATCACTGAATGACAGAATTACAGTAATCAAAGGAAAGGTCGAAGAT
GTAGAGTTACCTGAGAAAGCTGATATTTTGATCTCTGAGCCAATGGGTACACTTTTAGTT
AATGAAAGAATGTTGGAGTCTTATGTGATTGCAAGAGACCGGTTTCTTGTTCAAAATGGA
AAAATGTTTCCTGGCGTTGGAAGAATACACATGGCACCATTTAGTGACGAATATTTGTAT
ATGGAAATAGCAAATAAGGCTACCTTTTGGCAGCAGCAAAACTACTTTGGGGTTGATTTG
ACACCATTGCACGGATCTGCTTACCAAGGATACTTTTCTCAGCCAGTTGTTGATGCTTTT
GATTCTAGATTATTGGTAGCTCCTGCAGTGTCCCATGTGATAAACTTCAGTTCAGTAAAG
GAAGAAGATCTATATGAAATTGACGTCCCGTTGAGATTTCTCTCTACTGTTAGCACTAGA
ATTCATGGGCTGGCTTGCTGGTTTGATGTACTTTTTAATGGAAGCACTGTGCAAAGGTGG
CTGACCACTGCTCCGGGTGCACCAACAACTCACTGGTATCAGCTTCGGTGTGTCTTGCCA
CAACCACTTTATGTCATGCCAGGACAGGAGATAACTGGTCGGCTTCACCTAGTTGCCCAC
AAGGCACAAAGTTATACCATTTACCTAACATTGTCAGCTCTTGTTGGAGATATGCTCCAA
ACATCATCTGTTAAACTCGATCTGAAGGAACCATATTACCGGATGTCCCAGCCTCAGGCA
TATTCAGCAGCACAGGATCAAAATCCTAGTCAGCTATTACAATCGGACATGCAATTTCCA
TCTCGAGATGACGACGGATCAATCCTAATGCAACCACCCTCCCCGAATGAGCTACATTCT
CTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008353
PEP Infomation

pacid=37447665 transcript=PGSC0003DMT400012001 locus=PGSC0003DMG400004710 ID=PGSC0003DMT400012001.v4.03 annot-version=v4.03
Sequence

MEENQKQKQFLVSSVSELTSSSSSLFSKTEPVFARLSLDSGSPELRIGQGAELSDAVVFN
VKISQLFKLGPAESLCVSEANKEKSHSRGISIQFRNEEESRAFHCAFEQWKKEVVVQEPL
NNGAVSTSKSKFDDKIEASSAKMYFHYYGQLLHQQNMLQDFVRTGTYYSAVIENRADFLD
RVVVDVGAGSGILSLFAAQAGAKHVYAIEASEMADYARQLIAGNPSLNDRITVIKGKVED
VELPEKADILISEPMGTLLVNERMLESYVIARDRFLVQNGKMFPGVGRIHMAPFSDEYLY
MEIANKATFWQQQNYFGVDLTPLHGSAYQGYFSQPVVDAFDSRLLVAPAVSHVINFSSVK
EEDLYEIDVPLRFLSTVSTRIHGLACWFDVLFNGSTVQRWLTTAPGAPTTHWYQLRCVLP
QPLYVMPGQEITGRLHLVAHKAQSYTIYLTLSALVGDMLQTSSVKLDLKEPYYRMSQPQA
YSAAQDQNPSQLLQSDMQFPSRDDDGSILMQPPSPNELHSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400012001
Transcript Infomation

pacid=37447665 locus=PGSC0003DMG400004710 ID=PGSC0003DMT400012001.v4.03 annot-version=v4.03
Sequence

ATGGAGGAAAATCAGAAGCAGAAGCAATTTTTGGTTTCATCTGTATCGGAGCTTACAAGT
TCTTCATCTTCGTTGTTTTCCAAAACCGAACCGGTTTTTGCTCGGTTAAGCTTAGATTCC
GGTTCGCCGGAGCTCCGAATTGGTCAGGGTGCAGAGTTGAGTGATGCCGTTGTGTTCAAT
GTTAAGATTTCTCAGTTATTCAAGCTAGGCCCTGCCGAATCCTTATGTGTATCTGAAGCC
AATAAAGAGAAATCACATTCAAGAGGAATCTCCATTCAATTTAGAAACGAGGAGGAAAGT
AGGGCCTTCCATTGTGCATTTGAGCAATGGAAGAAGGAAGTGGTTGTTCAAGAACCTTTG
AACAATGGAGCAGTATCAACTTCGAAAAGCAAATTTGATGACAAAATTGAGGCATCTTCT
GCCAAAATGTACTTTCACTACTATGGACAGCTATTGCATCAGCAGAATATGTTGCAGGAT
TTTGTAAGGACAGGAACCTATTATTCCGCTGTAATTGAGAACCGTGCTGATTTTCTTGAT
CGCGTAGTGGTTGATGTTGGTGCTGGTAGTGGCATTTTGTCATTATTTGCAGCTCAGGCT
GGTGCAAAGCATGTTTATGCCATAGAGGCTTCTGAAATGGCCGACTATGCAAGACAACTT
ATTGCTGGAAATCCATCACTGAATGACAGAATTACAGTAATCAAAGGAAAGGTCGAAGAT
GTAGAGTTACCTGAGAAAGCTGATATTTTGATCTCTGAGCCAATGGGTACACTTTTAGTT
AATGAAAGAATGTTGGAGTCTTATGTGATTGCAAGAGACCGGTTTCTTGTTCAAAATGGA
AAAATGTTTCCTGGCGTTGGAAGAATACACATGGCACCATTTAGTGACGAATATTTGTAT
ATGGAAATAGCAAATAAGGCTACCTTTTGGCAGCAGCAAAACTACTTTGGGGTTGATTTG
ACACCATTGCACGGATCTGCTTACCAAGGATACTTTTCTCAGCCAGTTGTTGATGCTTTT
GATTCTAGATTATTGGTAGCTCCTGCAGTGTCCCATGTGATAAACTTCAGTTCAGTAAAG
GAAGAAGATCTATATGAAATTGACGTCCCGTTGAGATTTCTCTCTACTGTTAGCACTAGA
ATTCATGGGCTGGCTTGCTGGTTTGATGTACTTTTTAATGGAAGCACTGTGCAAAGGTGG
CTGACCACTGCTCCGGGTGCACCAACAACTCACTGGTATCAGCTTCGGTGTGTCTTGCCA
CAACCACTTTATGTCATGCCAGGACAGGAGATAACTGGTCGGCTTCACCTAGTTGCCCAC
AAGGCACAAAGTTATACCATTTACCTAACATTGTCAGCTCTTGTTGGAGATATGCTCCAA
ACATCATCTGTTAAACTCGATCTGAAGGAACCATATTACCGGATGTCCCAGCCTCAGGCA
TATTCAGCAGCACAGGATCAAAATCCTAGTCAGCTATTACAATCGGACATGCAATTTCCA
TCTCGAGATGACGACGGATCAATCCTAATGCAACCACCCTCCCCGAATGAGCTACATTCT
CTCTGA