Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011998
CDS Infomation

pacid=37448576 polypeptide=PGSC0003DMP400008350 locus=PGSC0003DMG400004708 ID=PGSC0003DMT400011998.v4.03 annot-version=v4.03
Sequence

ATGGGTGGTCAGACGCAGCAGAGCAATACAGCGGCTACTGCTCTATATGATCACTCAGGC
AATGCCGGCCCTGCTGGTGATGCTGGAGATGCCGTCATGGCGCGATGGCTTCAGTCTGCC
GGGTTACAGCATTTGGCATCTACTGGTGTGGATCAGCGTCTGCTTCCAAACTTGCTTATG
CAGGGATATGGAGCACAGTCTATGGAAGAGAAACAAAGGCTTTTCAAATTGATGAGAAAC
CTGAACCTTAATGGTGAATCTGCTTCTGATCCATATACTCCCACAGCCCAAAGTCCAGGA
GGATTTGGATCATCGGATGGCCTTTATTCTCCTGAGTTCAGAGGAGACTTCGGAGCTGGG
CTGTTGGATCTTCATTCCATGGATGACACTGAACTCTTAACTGAGCATGTAAATTCAGAA
CCATTTGAGGTGTCACCTTTCATGCCGGGGGTAAACAGAACATTTGATAGTGACAACGAT
CAACAGCAGAAAGCACAACCAGAGGCAGATGCTGCCGCAGGATTATCCACAATTGAAAAA
GAAAACAATGGGAGAGAAAACAATGTGGCGAAGATTAAAGTAGTGGTGCGCAAGAGACCT
TTAAACAAGAAGGAAGTTGCTCGGAAAGAGGATGACATTGTCACTGTACCAGACAATGAT
AGTCTCACAGTCCATGAACCCAAACTTAAGGTGGACTTGACTGCTTATGTTGAGAAGCAT
GAGTTCTGTTTTGATGCTGTTCTCGATGAGTATGTGACAAATGATCAGGTTTATCGAGCC
ACTGTGGAACCAATTATCCCAATCATCTTTCAGCGCACAAAAGCTACTTGCTTTGCTTAT
GGCCAGACAGGGAGTGGCAAGACATACACAATGCAACCATTGCCTCTTAGAGCAGCAGAA
GATCTTGTTAGGTTGTTGCATCAGCCAATTTATCGTAATCAGAAGTTCAAGTTGTGGCTC
AGCTTTTTTGAAATATATGGTGGAAAACTGTTTGATCTTCTTGGTGATCGGAGGAAACTC
TGTATGAGGGAAGATGGGCGGCAGCAGGTGTGTATTGTTGGACTCCAGGAATTTGAAGTT
TCAGATGTGCAGATTGTTAAAGAGTATATTGAGAGGGGAAATGCTGCAAGAAGTACTGGA
TCAACTGGTGCAAATGAGGAATCATCAAGATCACATGCGATATTGCAGCTTGTTGTCAAG
AAACCTAATGAGGTCAAGGAATCTAGAAGAAACAATGATGTTAATGAGTCCAAGGGTGGG
AAAGTTGTTGGAAAGATTTCTTTTATTGACCTTGCTGGTAGCGAGAGAGGTGCAGACACA
ACTGATAATGACCGACAAACAAGGATTGAAGGAGCAGAAATTAATAAGAGTTTGTTAGCT
CTTAAAGAGTGTATCCGCGCTCTCGACAATGACCAGAATCATATTCCATTCCGTGGGAGC
AAACTTACTGAGGTGCTCCGTGACTCCTTTGTTGGCAACTCAAGAACCGTTATGATTTCC
TGCATCTCTCCTAATGCAGGATCATGTGAACATACAATCAATACATTGAGATATGCTGAC
AGGGTGAAAAGTCTATCCAAAAGTGGAAACACAAAGAAAGATCAGAGTGCGAGTTTAATA
CCGTCTTCAGTGCCAACTTTGGCTGTTCCTGCTGGAGCAGGAGATGCTTATGAGCAACCT
CAAGAATCTAAAGTATTGGACACAAGAAGAAAGGCTATGGAGAAAGAAAGCACATCTTAC
ATTCCCTCTAGTGATTTTGATAAACAACCCTCTAGGTTTGGTTCAAGTCTTATCGCCAAC
AGCTGGGCCGAAAGTGGGGCAAATTCTGGTGGTATGGAGAGGGACAGGGTTGAGGTGAAG
AATGCGTACAGCATTCCAGGTGGTCAGAAACTGCACTCGACAACCAATTTGCAAAGTTCA
GCTGATGTAGTGGACAAGGTGCCGAAAGTGTCTCCACCTCGAAGGAAAGCATACAGGGAT
GAGAAATCTGAAAAGCCAGAACGGCCAGGAAATTGGTCAAGAAAAGATGTCGCAAGTGTT
GATTCATCTTCTACAAGTTATAGACAACAATCTACAAGTACCCCCACAAAAAGTGTTGGA
TCAAGACAAAATGAAGTTTCTTCACCTCCTCGTGATGAAAATATCAATGAAATACTCGAG
GAAGAAGAGGCCCTTATAGCTGCCCATAGGAAAGAAATTGAAGATACAATGGAGATTGTT
CGTGAAGAAATGAAACTGCTGGCAGAAGTTGATCAACCTGGAAGTCGCATTGACAATTAT
GTGACACAGCTAAGCTTTGTGCTATCGCGCAAAGCAGCAAGTCTGGTCAGCCTTCAGGCT
CGTCTTGCAAGATTCCAACATCGATTGAAAGAGCAGGAAATACTGAGTAGAAAGAGGGTA
CCGCGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400008350
PEP Infomation

pacid=37448576 transcript=PGSC0003DMT400011998 locus=PGSC0003DMG400004708 ID=PGSC0003DMT400011998.v4.03 annot-version=v4.03
Sequence

MGGQTQQSNTAATALYDHSGNAGPAGDAGDAVMARWLQSAGLQHLASTGVDQRLLPNLLM
QGYGAQSMEEKQRLFKLMRNLNLNGESASDPYTPTAQSPGGFGSSDGLYSPEFRGDFGAG
LLDLHSMDDTELLTEHVNSEPFEVSPFMPGVNRTFDSDNDQQQKAQPEADAAAGLSTIEK
ENNGRENNVAKIKVVVRKRPLNKKEVARKEDDIVTVPDNDSLTVHEPKLKVDLTAYVEKH
EFCFDAVLDEYVTNDQVYRATVEPIIPIIFQRTKATCFAYGQTGSGKTYTMQPLPLRAAE
DLVRLLHQPIYRNQKFKLWLSFFEIYGGKLFDLLGDRRKLCMREDGRQQVCIVGLQEFEV
SDVQIVKEYIERGNAARSTGSTGANEESSRSHAILQLVVKKPNEVKESRRNNDVNESKGG
KVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQNHIPFRGS
KLTEVLRDSFVGNSRTVMISCISPNAGSCEHTINTLRYADRVKSLSKSGNTKKDQSASLI
PSSVPTLAVPAGAGDAYEQPQESKVLDTRRKAMEKESTSYIPSSDFDKQPSRFGSSLIAN
SWAESGANSGGMERDRVEVKNAYSIPGGQKLHSTTNLQSSADVVDKVPKVSPPRRKAYRD
EKSEKPERPGNWSRKDVASVDSSSTSYRQQSTSTPTKSVGSRQNEVSSPPRDENINEILE
EEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSRIDNYVTQLSFVLSRKAASLVSLQA
RLARFQHRLKEQEILSRKRVPR*

Transcript Sequence

Transcript ID

PGSC0003DMT400011998
Transcript Infomation

pacid=37448576 locus=PGSC0003DMG400004708 ID=PGSC0003DMT400011998.v4.03 annot-version=v4.03
Sequence

ATGGGTGGTCAGACGCAGCAGAGCAATACAGCGGCTACTGCTCTATATGATCACTCAGGC
AATGCCGGCCCTGCTGGTGATGCTGGAGATGCCGTCATGGCGCGATGGCTTCAGTCTGCC
GGGTTACAGCATTTGGCATCTACTGGTGTGGATCAGCGTCTGCTTCCAAACTTGCTTATG
CAGGGATATGGAGCACAGTCTATGGAAGAGAAACAAAGGCTTTTCAAATTGATGAGAAAC
CTGAACCTTAATGGTGAATCTGCTTCTGATCCATATACTCCCACAGCCCAAAGTCCAGGA
GGATTTGGATCATCGGATGGCCTTTATTCTCCTGAGTTCAGAGGAGACTTCGGAGCTGGG
CTGTTGGATCTTCATTCCATGGATGACACTGAACTCTTAACTGAGCATGTAAATTCAGAA
CCATTTGAGGTGTCACCTTTCATGCCGGGGGTAAACAGAACATTTGATAGTGACAACGAT
CAACAGCAGAAAGCACAACCAGAGGCAGATGCTGCCGCAGGATTATCCACAATTGAAAAA
GAAAACAATGGGAGAGAAAACAATGTGGCGAAGATTAAAGTAGTGGTGCGCAAGAGACCT
TTAAACAAGAAGGAAGTTGCTCGGAAAGAGGATGACATTGTCACTGTACCAGACAATGAT
AGTCTCACAGTCCATGAACCCAAACTTAAGGTGGACTTGACTGCTTATGTTGAGAAGCAT
GAGTTCTGTTTTGATGCTGTTCTCGATGAGTATGTGACAAATGATCAGGTTTATCGAGCC
ACTGTGGAACCAATTATCCCAATCATCTTTCAGCGCACAAAAGCTACTTGCTTTGCTTAT
GGCCAGACAGGGAGTGGCAAGACATACACAATGCAACCATTGCCTCTTAGAGCAGCAGAA
GATCTTGTTAGGTTGTTGCATCAGCCAATTTATCGTAATCAGAAGTTCAAGTTGTGGCTC
AGCTTTTTTGAAATATATGGTGGAAAACTGTTTGATCTTCTTGGTGATCGGAGGAAACTC
TGTATGAGGGAAGATGGGCGGCAGCAGGTGTGTATTGTTGGACTCCAGGAATTTGAAGTT
TCAGATGTGCAGATTGTTAAAGAGTATATTGAGAGGGGAAATGCTGCAAGAAGTACTGGA
TCAACTGGTGCAAATGAGGAATCATCAAGATCACATGCGATATTGCAGCTTGTTGTCAAG
AAACCTAATGAGGTCAAGGAATCTAGAAGAAACAATGATGTTAATGAGTCCAAGGGTGGG
AAAGTTGTTGGAAAGATTTCTTTTATTGACCTTGCTGGTAGCGAGAGAGGTGCAGACACA
ACTGATAATGACCGACAAACAAGGATTGAAGGAGCAGAAATTAATAAGAGTTTGTTAGCT
CTTAAAGAGTGTATCCGCGCTCTCGACAATGACCAGAATCATATTCCATTCCGTGGGAGC
AAACTTACTGAGGTGCTCCGTGACTCCTTTGTTGGCAACTCAAGAACCGTTATGATTTCC
TGCATCTCTCCTAATGCAGGATCATGTGAACATACAATCAATACATTGAGATATGCTGAC
AGGGTGAAAAGTCTATCCAAAAGTGGAAACACAAAGAAAGATCAGAGTGCGAGTTTAATA
CCGTCTTCAGTGCCAACTTTGGCTGTTCCTGCTGGAGCAGGAGATGCTTATGAGCAACCT
CAAGAATCTAAAGTATTGGACACAAGAAGAAAGGCTATGGAGAAAGAAAGCACATCTTAC
ATTCCCTCTAGTGATTTTGATAAACAACCCTCTAGGTTTGGTTCAAGTCTTATCGCCAAC
AGCTGGGCCGAAAGTGGGGCAAATTCTGGTGGTATGGAGAGGGACAGGGTTGAGGTGAAG
AATGCGTACAGCATTCCAGGTGGTCAGAAACTGCACTCGACAACCAATTTGCAAAGTTCA
GCTGATGTAGTGGACAAGGTGCCGAAAGTGTCTCCACCTCGAAGGAAAGCATACAGGGAT
GAGAAATCTGAAAAGCCAGAACGGCCAGGAAATTGGTCAAGAAAAGATGTCGCAAGTGTT
GATTCATCTTCTACAAGTTATAGACAACAATCTACAAGTACCCCCACAAAAAGTGTTGGA
TCAAGACAAAATGAAGTTTCTTCACCTCCTCGTGATGAAAATATCAATGAAATACTCGAG
GAAGAAGAGGCCCTTATAGCTGCCCATAGGAAAGAAATTGAAGATACAATGGAGATTGTT
CGTGAAGAAATGAAACTGCTGGCAGAAGTTGATCAACCTGGAAGTCGCATTGACAATTAT
GTGACACAGCTAAGCTTTGTGCTATCGCGCAAAGCAGCAAGTCTGGTCAGCCTTCAGGCT
CGTCTTGCAAGATTCCAACATCGATTGAAAGAGCAGGAAATACTGAGTAGAAAGAGGGTA
CCGCGTTAG